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The map label for this gene is 78067546

Identifier: 78067546

GI number: 78067546

Start: 3218898

End: 3219332

Strand: Reverse

Name: 78067546

Synonym: Bcep18194_A6077

Alternate gene names: NA

Gene position: 3219332-3218898 (Counterclockwise)

Preceding gene: 78067547

Following gene: 78067545

Centisome position: 87.15

GC content: 67.59

Gene sequence:

>435_bases
ATGCTCAAGCTGCGTTTGCTCCAGGTCGCGTTACTCGCGGGCGTGCTGGCCGCCGGCAGCGCCGCTGCCGAAACGGTGCG
CCTGTCCGCCAATCTCCAGCCGTCGAGCGAAGTGCCGCCGACGGCGACCAAGGGCTCGGGCGACGTCGAGGCGACCTACG
ACACGGCCACCCACATGCTGCAATGGAAGGTCACGTACGAACACCTCACGGGGCCGGCCACCGCCGCGCACTTCCACGGG
CCCGCACCGGTCGGCCAGAACGCCGGCGTGCAGGTGCCGATTCCGAAGGACGAACTGGCGAGCCCGATCAACGGTTCGAA
GGAACTCACCGACGCGCAGGTCACCGACCTGATGGGCGGCAAGTGGTATTTCAACGTCCATACGAAGGACCACCCGTCCG
GCGAGATCCGCGGCCAGGTGATGCCGGCGAACTGA

Upstream 100 bases:

>100_bases
TGCATGGCCGTTCGGTGGGCTCCCGGCGCGGCGGCGATCGACTACCATCATGTCTGGCGCCCCCGCTCGGGCGGCGTACA
ACGTCGTACAAGGAGAGTCC

Downstream 100 bases:

>100_bases
GTGCCGGCGTTTGATCCGTGAGCGCCGGAAATCGGCAGACGCAGGCGGCATTCCGCTGTGTCGGGTGCGGGCATGAGGGC
CATGCCGATGTGGTCGGTGC

Product: CHRD domain-containing protein

Products: NA

Alternate protein names: CHRD Domain Containing Protein; Signal Peptide; CHRD Domain-Containing Superfamily; Chordin

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MLKLRLLQVALLAGVLAAGSAAAETVRLSANLQPSSEVPPTATKGSGDVEATYDTATHMLQWKVTYEHLTGPATAAHFHG
PAPVGQNAGVQVPIPKDELASPINGSKELTDAQVTDLMGGKWYFNVHTKDHPSGEIRGQVMPAN

Sequences:

>Translated_144_residues
MLKLRLLQVALLAGVLAAGSAAAETVRLSANLQPSSEVPPTATKGSGDVEATYDTATHMLQWKVTYEHLTGPATAAHFHG
PAPVGQNAGVQVPIPKDELASPINGSKELTDAQVTDLMGGKWYFNVHTKDHPSGEIRGQVMPAN
>Mature_144_residues
MLKLRLLQVALLAGVLAAGSAAAETVRLSANLQPSSEVPPTATKGSGDVEATYDTATHMLQWKVTYEHLTGPATAAHFHG
PAPVGQNAGVQVPIPKDELASPINGSKELTDAQVTDLMGGKWYFNVHTKDHPSGEIRGQVMPAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15133; Mature: 15133

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50933 CHRD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLRLLQVALLAGVLAAGSAAAETVRLSANLQPSSEVPPTATKGSGDVEATYDTATHML
CCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCEEEE
QWKVTYEHLTGPATAAHFHGPAPVGQNAGVQVPIPKDELASPINGSKELTDAQVTDLMGG
EEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHCCCCCCCCCCCCHHHHHCCCC
KWYFNVHTKDHPSGEIRGQVMPAN
EEEEEEECCCCCCCCEEEEEEECC
>Mature Secondary Structure
MLKLRLLQVALLAGVLAAGSAAAETVRLSANLQPSSEVPPTATKGSGDVEATYDTATHML
CCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCEEEE
QWKVTYEHLTGPATAAHFHGPAPVGQNAGVQVPIPKDELASPINGSKELTDAQVTDLMGG
EEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHCCCCCCCCCCCCHHHHHCCCC
KWYFNVHTKDHPSGEIRGQVMPAN
EEEEEEECCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA