Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
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Accession | NC_007510 |
Length | 3,694,126 |
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The map label for this gene is yusP [H]
Identifier: 78067542
GI number: 78067542
Start: 3215086
End: 3216681
Strand: Reverse
Name: yusP [H]
Synonym: Bcep18194_A6073
Alternate gene names: 78067542
Gene position: 3216681-3215086 (Counterclockwise)
Preceding gene: 78067544
Following gene: 78067541
Centisome position: 87.08
GC content: 67.67
Gene sequence:
>1596_bases ATGGCCGTCCATACTGCCGCCCACCATTCAAGCGGGCAAGTCCTGCCATTCCGCGAATCGCTGCTGGCGATGATCGGGAT CTCATTTGTCACCATGCTGGTCGCGCTCGACCAGACCGTCGTCGGCACCGCGCTGCCGACCATCGTCGCCGAGCTCCGCG GATTCGACCTGTACGCATGGGTCGCGACCTCGTACCTGCTCAGTTCCGTGATCACGGTGCCGATCTTCGGCCGGCTCGGC GACTATTACGGCCGCAAGCCGTTCGTCATCGCGTCGATCGTCGTGTTCACCGCCGCGTCCGTGCTGTGCGGGATGGCGAA CGACATGCTGATGCTCGTGCTCGCGCGCGGGCTGCAGGGGATCGGCGGCGGGATGCTGGTCGGCACCGCGTTCGCATGCA TTCCCGACCTGTTCCCCGATTCCGTCGTGCGGCTGCGCTGGCAGGTGCTGATGAGCTCCGCGTTCGGCATCGCGAACGCG GTCGGCCCGTCGCTCGGCGGCGTGCTGACCCAGTCGTTCGGCTGGCGTTCGGTGTTCTATGTGAACCTGCCGGTGGGCCT GCTGTCGCTGCTGTTCGTGTGGCGCTACTTGCCGCACCTGCGCCACGTCGCGCACGATCGCAAGATGCGGCTCGACTGGC CGGGCGCGTTGCTGATCGCGCTGTCGCTCGGCGCGCTGCAGCTGTTCGTCGAATGGCTGCCGAAGTACGGCGTCGCGAGC TGGGCGTCGCTGCTGCTCGTCGTCGCGGTCGCGGCCGGTTTCGGCCTGTGGCGCTGGGAGAAGCGTTGCGCGCAGCCGAT TTTGCCGTTCGACATGTTCGGCAACCGCGCGCTGTCGGCGCTCTTCGTGCTGGCGATCCTCGCCGGCTTCTCGATGTTCT CGCTGTTGTTCTACGCGCCGCTGCTGTTCCAGGGCGGGTTCGGGATGTCGCCGAAGGAAGCGGGGCTCGTGATCACGCCG CTCGTCGTGTTCATCACGATCGGCAGCATCATGAACGGCCGGGTCGTCACGCGCATCCGCAATCCGAACGCGATGCTGCA CGTCGGCTTCGTGCTGTTCGCGATCACCTGCGCGGGCATCGTCGTGTCGACCCACACGACGCCGAAGTGGGTGCTGATGG CGCTGATGGTCGCGGGCGGCATCGGGCTCGGCTTCGTGCTGCCGAACCTCACCGTCTTCGCGCAGCAGACGGCCGGCCGC GAGCATCTCGGCATCGCGACCGCGCTGCTGCAGTCGCTACGGATGGTCGGCGGGATGGTCGGCACCGCGCTGACCGGCAC CCTCGTCAACCAGATGTATTCGAGCGGCGTGCGCAGTGCGCTGTCGGCCGATCATGCGATGCAGTGGCATGCGCAGCTCG CCGATCCGCAGATCCTGATCGATCGCGCCGCGCAGGGCGGTCTCGTCGCGGAGCTGACGCGTGCCGGGCATAATGGCGCG CTGCTGCTGGAAGCGGCCCGCGAATCGCTCGTCGGCGCGATTCACCTGGGCGTCGCGATGGCGGCTGTCGTCGCCGTGGT GTCGGTGTGGCAGTGCCGCCGCGTGCCGCCGATCGCGTTGCGGCACAAGATCGAACCGCATGTCGCGGCCGACTGA
Upstream 100 bases:
>100_bases CTTGGCGGTCTGGTTCGATTTGACCGTCGTCAGCCTAGATTACTCCGGCGTGCTAGAATTTTGAGATTGTTTGACACGTC AAAAGTTGCGCCAACAAAAA
Downstream 100 bases:
>100_bases ACGATTGAACGAGTAGAACTGAGCGCATGGAAGAACAGGACCGCGTCGCGATCTTGCAGCAATTCGGACGCACGTATCGC GCGTTCATGACCGCGTTCGA
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 531; Mature: 530
Protein sequence:
>531_residues MAVHTAAHHSSGQVLPFRESLLAMIGISFVTMLVALDQTVVGTALPTIVAELRGFDLYAWVATSYLLSSVITVPIFGRLG DYYGRKPFVIASIVVFTAASVLCGMANDMLMLVLARGLQGIGGGMLVGTAFACIPDLFPDSVVRLRWQVLMSSAFGIANA VGPSLGGVLTQSFGWRSVFYVNLPVGLLSLLFVWRYLPHLRHVAHDRKMRLDWPGALLIALSLGALQLFVEWLPKYGVAS WASLLLVVAVAAGFGLWRWEKRCAQPILPFDMFGNRALSALFVLAILAGFSMFSLLFYAPLLFQGGFGMSPKEAGLVITP LVVFITIGSIMNGRVVTRIRNPNAMLHVGFVLFAITCAGIVVSTHTTPKWVLMALMVAGGIGLGFVLPNLTVFAQQTAGR EHLGIATALLQSLRMVGGMVGTALTGTLVNQMYSSGVRSALSADHAMQWHAQLADPQILIDRAAQGGLVAELTRAGHNGA LLLEAARESLVGAIHLGVAMAAVVAVVSVWQCRRVPPIALRHKIEPHVAAD
Sequences:
>Translated_531_residues MAVHTAAHHSSGQVLPFRESLLAMIGISFVTMLVALDQTVVGTALPTIVAELRGFDLYAWVATSYLLSSVITVPIFGRLG DYYGRKPFVIASIVVFTAASVLCGMANDMLMLVLARGLQGIGGGMLVGTAFACIPDLFPDSVVRLRWQVLMSSAFGIANA VGPSLGGVLTQSFGWRSVFYVNLPVGLLSLLFVWRYLPHLRHVAHDRKMRLDWPGALLIALSLGALQLFVEWLPKYGVAS WASLLLVVAVAAGFGLWRWEKRCAQPILPFDMFGNRALSALFVLAILAGFSMFSLLFYAPLLFQGGFGMSPKEAGLVITP LVVFITIGSIMNGRVVTRIRNPNAMLHVGFVLFAITCAGIVVSTHTTPKWVLMALMVAGGIGLGFVLPNLTVFAQQTAGR EHLGIATALLQSLRMVGGMVGTALTGTLVNQMYSSGVRSALSADHAMQWHAQLADPQILIDRAAQGGLVAELTRAGHNGA LLLEAARESLVGAIHLGVAMAAVVAVVSVWQCRRVPPIALRHKIEPHVAAD >Mature_530_residues AVHTAAHHSSGQVLPFRESLLAMIGISFVTMLVALDQTVVGTALPTIVAELRGFDLYAWVATSYLLSSVITVPIFGRLGD YYGRKPFVIASIVVFTAASVLCGMANDMLMLVLARGLQGIGGGMLVGTAFACIPDLFPDSVVRLRWQVLMSSAFGIANAV GPSLGGVLTQSFGWRSVFYVNLPVGLLSLLFVWRYLPHLRHVAHDRKMRLDWPGALLIALSLGALQLFVEWLPKYGVASW ASLLLVVAVAAGFGLWRWEKRCAQPILPFDMFGNRALSALFVLAILAGFSMFSLLFYAPLLFQGGFGMSPKEAGLVITPL VVFITIGSIMNGRVVTRIRNPNAMLHVGFVLFAITCAGIVVSTHTTPKWVLMALMVAGGIGLGFVLPNLTVFAQQTAGRE HLGIATALLQSLRMVGGMVGTALTGTLVNQMYSSGVRSALSADHAMQWHAQLADPQILIDRAAQGGLVAELTRAGHNGAL LLEAARESLVGAIHLGVAMAAVVAVVSVWQCRRVPPIALRHKIEPHVAAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. EmrB family [H]
Homologues:
Organism=Escherichia coli, GI87081983, Length=444, Percent_Identity=27.7027027027027, Blast_Score=125, Evalue=6e-30, Organism=Escherichia coli, GI1790195, Length=308, Percent_Identity=30.1948051948052, Blast_Score=115, Evalue=8e-27, Organism=Escherichia coli, GI1789042, Length=470, Percent_Identity=24.2553191489362, Blast_Score=104, Evalue=1e-23, Organism=Escherichia coli, GI1788710, Length=515, Percent_Identity=25.2427184466019, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1788392, Length=322, Percent_Identity=27.639751552795, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1790146, Length=172, Percent_Identity=30.8139534883721, Blast_Score=66, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6319770, Length=397, Percent_Identity=24.9370277078086, Blast_Score=109, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6322958, Length=489, Percent_Identity=24.1308793456033, Blast_Score=103, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6323735, Length=326, Percent_Identity=25.7668711656442, Blast_Score=92, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6321663, Length=150, Percent_Identity=34.6666666666667, Blast_Score=82, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6325455, Length=159, Percent_Identity=30.8176100628931, Blast_Score=79, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004638 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 56782; Mature: 56651
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVHTAAHHSSGQVLPFRESLLAMIGISFVTMLVALDQTVVGTALPTIVAELRGFDLYAW CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH VATSYLLSSVITVPIFGRLGDYYGRKPFVIASIVVFTAASVLCGMANDMLMLVLARGLQG HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC IGGGMLVGTAFACIPDLFPDSVVRLRWQVLMSSAFGIANAVGPSLGGVLTQSFGWRSVFY CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEE VNLPVGLLSLLFVWRYLPHLRHVAHDRKMRLDWPGALLIALSLGALQLFVEWLPKYGVAS EECCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHH WASLLLVVAVAAGFGLWRWEKRCAQPILPFDMFGNRALSALFVLAILAGFSMFSLLFYAP HHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLFQGGFGMSPKEAGLVITPLVVFITIGSIMNGRVVTRIRNPNAMLHVGFVLFAITCAGI HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHH VVSTHTTPKWVLMALMVAGGIGLGFVLPNLTVFAQQTAGREHLGIATALLQSLRMVGGMV HEECCCCHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH GTALTGTLVNQMYSSGVRSALSADHAMQWHAQLADPQILIDRAAQGGLVAELTRAGHNGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHCCCCCC LLLEAARESLVGAIHLGVAMAAVVAVVSVWQCRRVPPIALRHKIEPHVAAD EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCC >Mature Secondary Structure AVHTAAHHSSGQVLPFRESLLAMIGISFVTMLVALDQTVVGTALPTIVAELRGFDLYAW CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH VATSYLLSSVITVPIFGRLGDYYGRKPFVIASIVVFTAASVLCGMANDMLMLVLARGLQG HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC IGGGMLVGTAFACIPDLFPDSVVRLRWQVLMSSAFGIANAVGPSLGGVLTQSFGWRSVFY CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEE VNLPVGLLSLLFVWRYLPHLRHVAHDRKMRLDWPGALLIALSLGALQLFVEWLPKYGVAS EECCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHH WASLLLVVAVAAGFGLWRWEKRCAQPILPFDMFGNRALSALFVLAILAGFSMFSLLFYAP HHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLFQGGFGMSPKEAGLVITPLVVFITIGSIMNGRVVTRIRNPNAMLHVGFVLFAITCAGI HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHH VVSTHTTPKWVLMALMVAGGIGLGFVLPNLTVFAQQTAGREHLGIATALLQSLRMVGGMV HEECCCCHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH GTALTGTLVNQMYSSGVRSALSADHAMQWHAQLADPQILIDRAAQGGLVAELTRAGHNGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHCCCCCC LLLEAARESLVGAIHLGVAMAAVVAVVSVWQCRRVPPIALRHKIEPHVAAD EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]