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The map label for this gene is 78067479

Identifier: 78067479

GI number: 78067479

Start: 3144341

End: 3145423

Strand: Reverse

Name: 78067479

Synonym: Bcep18194_A6010

Alternate gene names: NA

Gene position: 3145423-3144341 (Counterclockwise)

Preceding gene: 78067485

Following gene: 78067478

Centisome position: 85.15

GC content: 68.88

Gene sequence:

>1083_bases
GTGGTTCATCTCGACGACCAGGCGCACGACCGCACGGCGGCGCGCCGTCACGAATACCGGATGATCGGCGGCGCCGGCGA
GCGCGCGCAGGCGGCCGGGCTCGTCAACGCCGCGTGGTACCGGTGCGCGGTGCCGCGGCCGCTGATGAAGCAGCTGATGC
AGCGCGGCGACGCGCGCGCGATCCGCGACACGCTGATCTGGTACGCGGCGATCGCGATCAGCGGCGTGCTCGCGTGGCTG
GCATGGCGCGCGCATTCGGCGTGGGCGATCCCCGCGTTCTTCGTGTACGGCACGCTCTACTGCAGCCCGGCCGACTCGCG
CTGGCACGAATGCGGGCACGGCACCGCGTTCCGCACGCGCTGGATGAACGACGTGCTGTACCAGGTCGCGTCGTTCCAGG
TGTTCCGCCGCGCGACGGCGTGGCGCTGGAGCCATGCGCGCCATCACACCGATACGCTGGTCGTCGGGCGCGATCCGGAA
ATCGCGGCGCCGAAGCCGACCGACTGGCTCTCGCTCGTGCTGAACCTCGTCGCGCTGAAGCATGTGGCCGGCGAGCTGCG
CAAGATGATCGCGATCGCGTTCACCGGCCGGCTCGACGACGAGGAGTGCACCTACGTGCCCGAATCGGAACGGCCGAAGG
TGGTACGCGAGTGTCGCATCCATCTCGCGGTGTACGCGCTCGTGACCGGTGCTTCGCTCTACTGGCACACGATCCTGCCG
CTGCTCTACATCGGGCTGCCGAGCCTCTACGGCGCGTGGCTGTACCTGTACTTCGGCCTCACGCAGCACGCGGGCATGCC
CGAGAACGTGCTCGATCACCGGCGCAACTGCCGGACCGTGATGATGAATCCGGTGTTCCGCTTCCTGTACTGGAACATGA
ACTACCACGTCGAGCACCACATGTTCCCGATGGTGCCGTTCCACGCGCTGCCGAAGCTGCACGAGGCCGTGAAGGCCGAC
ATGCCGCCGCCGTATCGCAGCACGCTGGCCGCGTATGCGGAGATCGTGCCGGCGCTGGTCCGGCAGACGCGCGACCCGTC
CCATTACGTCGTGCGGCCCGTGCCGGATGCCGCGCGTGCCTGA

Upstream 100 bases:

>100_bases
TCAACGTTTCGATTGAGCGGGGGAGGCTGCGGGCCTAATTTTGATTCCATGCCGAAGCGCTTGCCGCGCTTCCTACGGAC
AAGGAATCAAGGAGACGCAC

Downstream 100 bases:

>100_bases
CCGACATCGAACCTTCCAACCGAGGAGACAAGCAACATGACGCAATGGATCGACACCGGCGCGCTCGACGACATCGACGA
CGAAGACGTCGCGCGCTTCG

Product: Fatty acid desaturase

Products: NA

Alternate protein names: Hydrocarbon Oxygenase MocD; Fatty Acid Desaturase Subfamily; Desaturase; Oxidoreductase; Fatty Acid Desaturase Family Protein; Transmembrane Fatty Acid Desaturase; Prolyl 4-Hydroxylase Subunit Alpha; Rieske Domain-Containing Protein; Fatty Acid Desaturase Subfamily Protein; Hydrocarbon Oxygenase; Rhizopine Catabolism Protein MocD; Rhizopine Catabolism Protein; Hydrocarbon Oxigenase Protein

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MVHLDDQAHDRTAARRHEYRMIGGAGERAQAAGLVNAAWYRCAVPRPLMKQLMQRGDARAIRDTLIWYAAIAISGVLAWL
AWRAHSAWAIPAFFVYGTLYCSPADSRWHECGHGTAFRTRWMNDVLYQVASFQVFRRATAWRWSHARHHTDTLVVGRDPE
IAAPKPTDWLSLVLNLVALKHVAGELRKMIAIAFTGRLDDEECTYVPESERPKVVRECRIHLAVYALVTGASLYWHTILP
LLYIGLPSLYGAWLYLYFGLTQHAGMPENVLDHRRNCRTVMMNPVFRFLYWNMNYHVEHHMFPMVPFHALPKLHEAVKAD
MPPPYRSTLAAYAEIVPALVRQTRDPSHYVVRPVPDAARA

Sequences:

>Translated_360_residues
MVHLDDQAHDRTAARRHEYRMIGGAGERAQAAGLVNAAWYRCAVPRPLMKQLMQRGDARAIRDTLIWYAAIAISGVLAWL
AWRAHSAWAIPAFFVYGTLYCSPADSRWHECGHGTAFRTRWMNDVLYQVASFQVFRRATAWRWSHARHHTDTLVVGRDPE
IAAPKPTDWLSLVLNLVALKHVAGELRKMIAIAFTGRLDDEECTYVPESERPKVVRECRIHLAVYALVTGASLYWHTILP
LLYIGLPSLYGAWLYLYFGLTQHAGMPENVLDHRRNCRTVMMNPVFRFLYWNMNYHVEHHMFPMVPFHALPKLHEAVKAD
MPPPYRSTLAAYAEIVPALVRQTRDPSHYVVRPVPDAARA
>Mature_360_residues
MVHLDDQAHDRTAARRHEYRMIGGAGERAQAAGLVNAAWYRCAVPRPLMKQLMQRGDARAIRDTLIWYAAIAISGVLAWL
AWRAHSAWAIPAFFVYGTLYCSPADSRWHECGHGTAFRTRWMNDVLYQVASFQVFRRATAWRWSHARHHTDTLVVGRDPE
IAAPKPTDWLSLVLNLVALKHVAGELRKMIAIAFTGRLDDEECTYVPESERPKVVRECRIHLAVYALVTGASLYWHTILP
LLYIGLPSLYGAWLYLYFGLTQHAGMPENVLDHRRNCRTVMMNPVFRFLYWNMNYHVEHHMFPMVPFHALPKLHEAVKAD
MPPPYRSTLAAYAEIVPALVRQTRDPSHYVVRPVPDAARA

Specific function: Unknown

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41273; Mature: 41273

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVHLDDQAHDRTAARRHEYRMIGGAGERAQAAGLVNAAWYRCAVPRPLMKQLMQRGDARA
CCCCCCCHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHH
IRDTLIWYAAIAISGVLAWLAWRAHSAWAIPAFFVYGTLYCSPADSRWHECGHGTAFRTR
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCHHHHHCCCCHHHHHH
WMNDVLYQVASFQVFRRATAWRWSHARHHTDTLVVGRDPEIAAPKPTDWLSLVLNLVALK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHH
HVAGELRKMIAIAFTGRLDDEECTYVPESERPKVVRECRIHLAVYALVTGASLYWHTILP
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LLYIGLPSLYGAWLYLYFGLTQHAGMPENVLDHRRNCRTVMMNPVFRFLYWNMNYHVEHH
HHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEHHC
MFPMVPFHALPKLHEAVKADMPPPYRSTLAAYAEIVPALVRQTRDPSHYVVRPVPDAARA
CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHCCC
>Mature Secondary Structure
MVHLDDQAHDRTAARRHEYRMIGGAGERAQAAGLVNAAWYRCAVPRPLMKQLMQRGDARA
CCCCCCCHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHH
IRDTLIWYAAIAISGVLAWLAWRAHSAWAIPAFFVYGTLYCSPADSRWHECGHGTAFRTR
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCHHHHHCCCCHHHHHH
WMNDVLYQVASFQVFRRATAWRWSHARHHTDTLVVGRDPEIAAPKPTDWLSLVLNLVALK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHH
HVAGELRKMIAIAFTGRLDDEECTYVPESERPKVVRECRIHLAVYALVTGASLYWHTILP
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LLYIGLPSLYGAWLYLYFGLTQHAGMPENVLDHRRNCRTVMMNPVFRFLYWNMNYHVEHH
HHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEHHC
MFPMVPFHALPKLHEAVKADMPPPYRSTLAAYAEIVPALVRQTRDPSHYVVRPVPDAARA
CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA