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The map label for this gene is araC [C]

Identifier: 78067211

GI number: 78067211

Start: 2847202

End: 2848236

Strand: Direct

Name: araC [C]

Synonym: Bcep18194_A5742

Alternate gene names: 78067211

Gene position: 2847202-2848236 (Clockwise)

Preceding gene: 78067209

Following gene: 78067212

Centisome position: 77.07

GC content: 70.14

Gene sequence:

>1035_bases
ATGGAGTTACGACAGAAATCGGTATCCGTCCGGGTCTACCGACAGGCGCTCGACGACATGCGCCGCAACGGCTTCGACCT
CGCGCCGTTGTATGCGACGCTCGGCATCGGCGCGACCGATCTCGCCGACGATGCGCGGCGCATCCCCGGCGATCGGCACG
TCGCCGCGATGCGGCTGATGAGCGAATGGCCGTTGTCCTGGCATCGGCCGCCGCCGCAGGTCGTGCCGTGGCTCGCGCCG
TTCCCCGAGCTCGCGGGCATCACCTGCAACGCCGCGACGCTGCGCGATGCGCTGCACGGCTACTTGCGCTACCGCGAACT
GATCGGCAACGTCGACTGGGTGTTCGCGCATGAAACCAGCGGCGCGATCGCGCTCGAGTACGTGAACGAGGGCGACGGCC
GGCCCGCCAGCAGCGCGTTCGCAAATTTCGCGATCCTCGTCGCGCTTGCGCGCCTGTACGATCCGCACGTGCAGGTCGAC
GAAGCCGCGTTCGCGGGCCGCGCGTTCGCGCCGACGGCCGCGCTGCGCGACCTCCTCGGCGCGGCAGTGTCGTTCGATGC
CGCGTACAACCGCGTCGTGCTGCGCTCCGCGCGCCTCGACACGCCGTTCGAGCGCTACAACGCGCCGCTTGCGGACATCC
AGCGTCATGCAGCCGACGCCGCGCGCGCGCGCGTGCGCGCCCGCTCGACGTTCGGCTCGTCGGTCGAACAATGCGTGCGT
GACTGGCTGCGCACGTCCGACGACGCCGACGTGCCGTCCGACACGCTGATGGAGCACGTCTGCACACGCTTCGCGATGTC
GCGCTGGACACTGCGCCGGCGGCTGCATCGCGAAGCGGTCGGGTTTCATGCGCTCGTCGCACAGGCCCGGCTCGGTGAAG
CGCGCGACCTGCTGCTGAATACGCAACTGCCGATCGGCGAGATCGGCGTGCGGGTCGGCTTCCGTTCGACGAGCGCGTTC
ACGCGCTTCTTCACGCGCGAACTCGGCGCGGCGCCGAGCCGCTTCCGCGACGGGCACGGCGATCGGTGGCGTTGA

Upstream 100 bases:

>100_bases
CAGCGTCCAAGCAAAAAACGACCGGTCACCATGCTTGACCGGCAAGAGCAGTACTTGACCTCTCGCAGCGGGGGCAAACC
CGAAGGTCATGGAGAGAGAC

Downstream 100 bases:

>100_bases
CGGGCACTTTTTCTGAGACACTGGCGGCTTCGCATCCCGCCGCCCTGCCATGTCCTGGTTTCTGTATCTGATCGAATGCG
CCGACGACAGCGTCTACACC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Regulator AraC Family Protein

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MELRQKSVSVRVYRQALDDMRRNGFDLAPLYATLGIGATDLADDARRIPGDRHVAAMRLMSEWPLSWHRPPPQVVPWLAP
FPELAGITCNAATLRDALHGYLRYRELIGNVDWVFAHETSGAIALEYVNEGDGRPASSAFANFAILVALARLYDPHVQVD
EAAFAGRAFAPTAALRDLLGAAVSFDAAYNRVVLRSARLDTPFERYNAPLADIQRHAADAARARVRARSTFGSSVEQCVR
DWLRTSDDADVPSDTLMEHVCTRFAMSRWTLRRRLHREAVGFHALVAQARLGEARDLLLNTQLPIGEIGVRVGFRSTSAF
TRFFTRELGAAPSRFRDGHGDRWR

Sequences:

>Translated_344_residues
MELRQKSVSVRVYRQALDDMRRNGFDLAPLYATLGIGATDLADDARRIPGDRHVAAMRLMSEWPLSWHRPPPQVVPWLAP
FPELAGITCNAATLRDALHGYLRYRELIGNVDWVFAHETSGAIALEYVNEGDGRPASSAFANFAILVALARLYDPHVQVD
EAAFAGRAFAPTAALRDLLGAAVSFDAAYNRVVLRSARLDTPFERYNAPLADIQRHAADAARARVRARSTFGSSVEQCVR
DWLRTSDDADVPSDTLMEHVCTRFAMSRWTLRRRLHREAVGFHALVAQARLGEARDLLLNTQLPIGEIGVRVGFRSTSAF
TRFFTRELGAAPSRFRDGHGDRWR
>Mature_344_residues
MELRQKSVSVRVYRQALDDMRRNGFDLAPLYATLGIGATDLADDARRIPGDRHVAAMRLMSEWPLSWHRPPPQVVPWLAP
FPELAGITCNAATLRDALHGYLRYRELIGNVDWVFAHETSGAIALEYVNEGDGRPASSAFANFAILVALARLYDPHVQVD
EAAFAGRAFAPTAALRDLLGAAVSFDAAYNRVVLRSARLDTPFERYNAPLADIQRHAADAARARVRARSTFGSSVEQCVR
DWLRTSDDADVPSDTLMEHVCTRFAMSRWTLRRRLHREAVGFHALVAQARLGEARDLLLNTQLPIGEIGVRVGFRSTSAF
TRFFTRELGAAPSRFRDGHGDRWR

Specific function: This Protein Controls The Expression Of At Least Six Genes That Are Involved In The Transport And Catabolism Of L-Arabinose. It Regulates Initiation Of Transcription Of The Arabad Operon And It Also Controls Its Own Synthesis. The L- Arabinose Operon Dis

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38438; Mature: 38438

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELRQKSVSVRVYRQALDDMRRNGFDLAPLYATLGIGATDLADDARRIPGDRHVAAMRLM
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHH
SEWPLSWHRPPPQVVPWLAPFPELAGITCNAATLRDALHGYLRYRELIGNVDWVFAHETS
HHCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
GAIALEYVNEGDGRPASSAFANFAILVALARLYDPHVQVDEAAFAGRAFAPTAALRDLLG
CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHH
AAVSFDAAYNRVVLRSARLDTPFERYNAPLADIQRHAADAARARVRARSTFGSSVEQCVR
HHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DWLRTSDDADVPSDTLMEHVCTRFAMSRWTLRRRLHREAVGFHALVAQARLGEARDLLLN
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHC
TQLPIGEIGVRVGFRSTSAFTRFFTRELGAAPSRFRDGHGDRWR
CCCCHHHHHHEECCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCC
>Mature Secondary Structure
MELRQKSVSVRVYRQALDDMRRNGFDLAPLYATLGIGATDLADDARRIPGDRHVAAMRLM
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHH
SEWPLSWHRPPPQVVPWLAPFPELAGITCNAATLRDALHGYLRYRELIGNVDWVFAHETS
HHCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
GAIALEYVNEGDGRPASSAFANFAILVALARLYDPHVQVDEAAFAGRAFAPTAALRDLLG
CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHH
AAVSFDAAYNRVVLRSARLDTPFERYNAPLADIQRHAADAARARVRARSTFGSSVEQCVR
HHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DWLRTSDDADVPSDTLMEHVCTRFAMSRWTLRRRLHREAVGFHALVAQARLGEARDLLLN
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHC
TQLPIGEIGVRVGFRSTSAFTRFFTRELGAAPSRFRDGHGDRWR
CCCCHHHHHHEECCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA