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The map label for this gene is yhbQ [C]

Identifier: 78067212

GI number: 78067212

Start: 2848286

End: 2849155

Strand: Direct

Name: yhbQ [C]

Synonym: Bcep18194_A5743

Alternate gene names: 78067212

Gene position: 2848286-2849155 (Clockwise)

Preceding gene: 78067211

Following gene: 78067214

Centisome position: 77.1

GC content: 67.01

Gene sequence:

>870_bases
ATGTCCTGGTTTCTGTATCTGATCGAATGCGCCGACGACAGCGTCTACACCGGCATCACGACCGACGTTGCCGCGCGCTT
CGACGAGCACGCATCCGGCAAGGGCGCGCGCTACACGCGCTCACGCAAGCCGCGCGCGGTGCTCGCGTCGTTTCCGCTGC
CCGACCGGTCGAGTGCATCGCGCGCCGAATACTGGGTGAAGCGGCTCACGGCGGCGCAGAAACGGGAGCTGGCGGCCGGG
TTGCGGACGCTGGAGTCGGTGCTGCCGGCCGTGGTGGCCGTCGATGCGAGTGGTGATGTGGCCGGGTTGAAGGCCGGTGC
TCGCGGGCGGAAGAAGGCGAAGGCGGAGAACGTCGATAGCGCGGCGAAGACGGTTGAAGCGGGTAAAGGCACGAAGAAGG
CTGGAAAGGCGGGGAAAGCCGAGACGGTCGACAAGGTCGTAAAGGTCTCAAAGGCCGGAAAAGCGGAGAAGGTCGACAAG
CCCGCGAAGACCGCCAAGCCGACAAAAGCCGCACCGGTCGCGAAACGCAAGAAGCCCGACAGCGATGCGGCCTCACGCAA
AGCTTCGTCGCGCGACGCCCTGGCAAAAAAGGACAAGCCGGCCGCACCCTCTTCGTCGAAAAAAAAGGTGCCGGCAGCCA
GTGGCAAACCCGTCACGACCGGACGCGAAGACGCCGCGCCCGCACCGGGTCGCCGCCGCCCGGCAGCCACGAAAGCCACC
AAAGCCACGGCGGCCTCCGTTGCACCCGTTGCCCCTCGCCGCGCGAAGCGCACGAAGGATGCGCAGGCCACCGCCACACC
GCGTGCGTCCGTGGCCGCCTCGGCGCGCAAACAACCTCAACGCACAAAACAAAACCGCGCGGCCTCCTGA

Upstream 100 bases:

>100_bases
GGCGCGGCGCCGAGCCGCTTCCGCGACGGGCACGGCGATCGGTGGCGTTGACGGGCACTTTTTCTGAGACACTGGCGGCT
TCGCATCCCGCCGCCCTGCC

Downstream 100 bases:

>100_bases
GGAGACACGCGCGGTTTGCGTTTCGCACGAACCGGCCGTCGGCCGGTACGCCGCTTACTTCTTGTAGTTCGCTGCGCCGT
CGGTGATTTCCTTGTGCGCG

Product: excinuclease ABC subunit C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MSWFLYLIECADDSVYTGITTDVAARFDEHASGKGARYTRSRKPRAVLASFPLPDRSSASRAEYWVKRLTAAQKRELAAG
LRTLESVLPAVVAVDASGDVAGLKAGARGRKKAKAENVDSAAKTVEAGKGTKKAGKAGKAETVDKVVKVSKAGKAEKVDK
PAKTAKPTKAAPVAKRKKPDSDAASRKASSRDALAKKDKPAAPSSSKKKVPAASGKPVTTGREDAAPAPGRRRPAATKAT
KATAASVAPVAPRRAKRTKDAQATATPRASVAASARKQPQRTKQNRAAS

Sequences:

>Translated_289_residues
MSWFLYLIECADDSVYTGITTDVAARFDEHASGKGARYTRSRKPRAVLASFPLPDRSSASRAEYWVKRLTAAQKRELAAG
LRTLESVLPAVVAVDASGDVAGLKAGARGRKKAKAENVDSAAKTVEAGKGTKKAGKAGKAETVDKVVKVSKAGKAEKVDK
PAKTAKPTKAAPVAKRKKPDSDAASRKASSRDALAKKDKPAAPSSSKKKVPAASGKPVTTGREDAAPAPGRRRPAATKAT
KATAASVAPVAPRRAKRTKDAQATATPRASVAASARKQPQRTKQNRAAS
>Mature_288_residues
SWFLYLIECADDSVYTGITTDVAARFDEHASGKGARYTRSRKPRAVLASFPLPDRSSASRAEYWVKRLTAAQKRELAAGL
RTLESVLPAVVAVDASGDVAGLKAGARGRKKAKAENVDSAAKTVEAGKGTKKAGKAGKAETVDKVVKVSKAGKAEKVDKP
AKTAKPTKAAPVAKRKKPDSDAASRKASSRDALAKKDKPAAPSSSKKKVPAASGKPVTTGREDAAPAPGRRRPAATKATK
ATAASVAPVAPRRAKRTKDAQATATPRASVAASARKQPQRTKQNRAAS

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0213 family [H]

Homologues:

Organism=Escherichia coli, GI1789545, Length=77, Percent_Identity=54.5454545454545, Blast_Score=86, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000305 [H]

Pfam domain/function: PF01541 GIY-YIG [H]

EC number: NA

Molecular weight: Translated: 30116; Mature: 29985

Theoretical pI: Translated: 11.42; Mature: 11.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWFLYLIECADDSVYTGITTDVAARFDEHASGKGARYTRSRKPRAVLASFPLPDRSSAS
CCEEEEEEEECCCCEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCHH
RAEYWVKRLTAAQKRELAAGLRTLESVLPAVVAVDASGDVAGLKAGARGRKKAKAENVDS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHCCCCCHHHHHHHHHHH
AAKTVEAGKGTKKAGKAGKAETVDKVVKVSKAGKAEKVDKPAKTAKPTKAAPVAKRKKPD
HHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHCCCHHHCCCCHHHCCCCCCCCCHHCCCCC
SDAASRKASSRDALAKKDKPAAPSSSKKKVPAASGKPVTTGREDAAPAPGRRRPAATKAT
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
KATAASVAPVAPRRAKRTKDAQATATPRASVAASARKQPQRTKQNRAAS
HHHHHHCCCCCCHHHHHCCCCHHCCCCHHHHHHHHHHCHHHHHHHCCCC
>Mature Secondary Structure 
SWFLYLIECADDSVYTGITTDVAARFDEHASGKGARYTRSRKPRAVLASFPLPDRSSAS
CEEEEEEEECCCCEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCHH
RAEYWVKRLTAAQKRELAAGLRTLESVLPAVVAVDASGDVAGLKAGARGRKKAKAENVDS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHCCCCCHHHHHHHHHHH
AAKTVEAGKGTKKAGKAGKAETVDKVVKVSKAGKAEKVDKPAKTAKPTKAAPVAKRKKPD
HHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHCCCHHHCCCCHHHCCCCCCCCCHHCCCCC
SDAASRKASSRDALAKKDKPAAPSSSKKKVPAASGKPVTTGREDAAPAPGRRRPAATKAT
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
KATAASVAPVAPRRAKRTKDAQATATPRASVAASARKQPQRTKQNRAAS
HHHHHHCCCCCCHHHHHCCCCHHCCCCHHHHHHHHHHCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA