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The map label for this gene is omp32 [H]

Identifier: 78067206

GI number: 78067206

Start: 2842051

End: 2843130

Strand: Direct

Name: omp32 [H]

Synonym: Bcep18194_A5737

Alternate gene names: 78067206

Gene position: 2842051-2843130 (Clockwise)

Preceding gene: 78067205

Following gene: 78067209

Centisome position: 76.93

GC content: 64.63

Gene sequence:

>1080_bases
ATGATGAAGAAAGCTTTGGTCGCGGCCGCGCTGATGGCTGCTGGGGTGGTGACGGCGCACGCGCAGAGCAGCGTCACGCT
GTATGGCCGCCTGGATGCCGGCATCGAGTACATGAACGGCCTGCAAAACGGCCACCAAGTGCGCGCGGAAAGCGGCGACT
GGGGCACGAGCCTCTGGGGCTTGAAGGGCACCGAGGACATCGGTGGCGGTAACAAGGTCCTGTTCCACCTCGAAGGCGCA
TTCAACACGATGACGGGCGGCTTCAGCGGCTCGATCTGGGATCGTTATGCGACGGTCGGCATCTCCAACGACCGCTACGG
TACGCTGCTGCTGGGTCGCGAACTCGCGATCGCCAACGGCGTGTGGGACTTCGACCCGTTCGGCCAGTCGGCCTGGTCGA
CGGCCTCGCTGGTGCGCGGCCGCAACTGGAACAAGACCAGCAACAACGTGTCGTACCAGTCGCCGCAGTTCTACGGCCTC
GACTTCTACGGCCAGTTCTCGTTCTCGAACTCGACCAGCTTCAACGGCAACACGACGGCCGGCCAACCGGGTCGTGCAGC
CGGCGCACAGGTCACCTATACGAATTCGCTGTTCCAGTTGCGCGGTATCTACGACGAAACGCGCGACAGCAACGGCCGCT
TCTCGGACGTGTTCAACTACTCGCGTGAATACTTCGCGGGCGTGAACGTGTTCCTCGGCCAGTTCAAGGTTCAGGCAGCC
TACCAGGCATCGCGCGCTGACGGCAGCGGCGGCCCGGCAGTGAACGCCGGCGTGACGGGCACCCAGCAGGTCTGGGGCGG
CGTGACGTGGCAGGCAACGCCGGCAGCGGCACTGATCGCAGCCGTGTATCACGTGAACGCGAACCACGGCGGCGGCAACG
CGAACATCTATACCGTCGGCGGCTCGTACAACATCTCGAAGCGCACGCTGTTCGACCTGCAGGTCGCAACGGTGCGCAAC
AGCAAGAACGCCAACTTCGGCCTGAACGCGAACGGCGCCGGTACGGCCGTGTCGACGGGCAACCCGAATCCGGGCGGCAG
CCAGACGGGCGTCTACGCCGGTATCCAGCACCTGTTCTGA

Upstream 100 bases:

>100_bases
CCCTGCACGAGGTCTCCCTGGTTATCCCGCTTTTGCCCGGCGCTCGCGCTCCGGGCATCTCGTGCAGTCTGGGTTGACTT
TTTGACAGGGTATGGAGGAG

Downstream 100 bases:

>100_bases
TCAGGCGCCGTTCTCAAAGAATCGATTCGACAACGTTTTCCACGCTGCTGCGAGAGGCGCGTATCGGTGCGGTACCCAAC
CGGGTATCGCACCGTTTTTT

Product: outer membrane protein (porin)-like

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MMKKALVAAALMAAGVVTAHAQSSVTLYGRLDAGIEYMNGLQNGHQVRAESGDWGTSLWGLKGTEDIGGGNKVLFHLEGA
FNTMTGGFSGSIWDRYATVGISNDRYGTLLLGRELAIANGVWDFDPFGQSAWSTASLVRGRNWNKTSNNVSYQSPQFYGL
DFYGQFSFSNSTSFNGNTTAGQPGRAAGAQVTYTNSLFQLRGIYDETRDSNGRFSDVFNYSREYFAGVNVFLGQFKVQAA
YQASRADGSGGPAVNAGVTGTQQVWGGVTWQATPAAALIAAVYHVNANHGGGNANIYTVGGSYNISKRTLFDLQVATVRN
SKNANFGLNANGAGTAVSTGNPNPGGSQTGVYAGIQHLF

Sequences:

>Translated_359_residues
MMKKALVAAALMAAGVVTAHAQSSVTLYGRLDAGIEYMNGLQNGHQVRAESGDWGTSLWGLKGTEDIGGGNKVLFHLEGA
FNTMTGGFSGSIWDRYATVGISNDRYGTLLLGRELAIANGVWDFDPFGQSAWSTASLVRGRNWNKTSNNVSYQSPQFYGL
DFYGQFSFSNSTSFNGNTTAGQPGRAAGAQVTYTNSLFQLRGIYDETRDSNGRFSDVFNYSREYFAGVNVFLGQFKVQAA
YQASRADGSGGPAVNAGVTGTQQVWGGVTWQATPAAALIAAVYHVNANHGGGNANIYTVGGSYNISKRTLFDLQVATVRN
SKNANFGLNANGAGTAVSTGNPNPGGSQTGVYAGIQHLF
>Mature_359_residues
MMKKALVAAALMAAGVVTAHAQSSVTLYGRLDAGIEYMNGLQNGHQVRAESGDWGTSLWGLKGTEDIGGGNKVLFHLEGA
FNTMTGGFSGSIWDRYATVGISNDRYGTLLLGRELAIANGVWDFDPFGQSAWSTASLVRGRNWNKTSNNVSYQSPQFYGL
DFYGQFSFSNSTSFNGNTTAGQPGRAAGAQVTYTNSLFQLRGIYDETRDSNGRFSDVFNYSREYFAGVNVFLGQFKVQAA
YQASRADGSGGPAVNAGVTGTQQVWGGVTWQATPAAALIAAVYHVNANHGGGNANIYTVGGSYNISKRTLFDLQVATVRN
SKNANFGLNANGAGTAVSTGNPNPGGSQTGVYAGIQHLF

Specific function: Forms anion selective channels [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 37959; Mature: 37959

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKALVAAALMAAGVVTAHAQSSVTLYGRLDAGIEYMNGLQNGHQVRAESGDWGTSLWG
CCHHHHHHHHHHHHHHHEECCCCCEEEEEECHHHHHHHHHCCCCCEEEECCCCCCCEECC
LKGTEDIGGGNKVLFHLEGAFNTMTGGFSGSIWDRYATVGISNDRYGTLLLGRELAIANG
CCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHEEEEEECCCCCEEEEEECEEEEECC
VWDFDPFGQSAWSTASLVRGRNWNKTSNNVSYQSPQFYGLDFYGQFSFSNSTSFNGNTTA
CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEECEEEEEEEECCCCCCCCCCCCC
GQPGRAAGAQVTYTNSLFQLRGIYDETRDSNGRFSDVFNYSREYFAGVNVFLGQFKVQAA
CCCCCCCCCEEEEECCEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHEEEEHEEEEEH
YQASRADGSGGPAVNAGVTGTQQVWGGVTWQATPAAALIAAVYHVNANHGGGNANIYTVG
HHHCCCCCCCCCEEECCCCCCHHHHCCEEECCCHHHHHEEHHEEEECCCCCCCCEEEEEC
GSYNISKRTLFDLQVATVRNSKNANFGLNANGAGTAVSTGNPNPGGSQTGVYAGIQHLF
CCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MMKKALVAAALMAAGVVTAHAQSSVTLYGRLDAGIEYMNGLQNGHQVRAESGDWGTSLWG
CCHHHHHHHHHHHHHHHEECCCCCEEEEEECHHHHHHHHHCCCCCEEEECCCCCCCEECC
LKGTEDIGGGNKVLFHLEGAFNTMTGGFSGSIWDRYATVGISNDRYGTLLLGRELAIANG
CCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHEEEEEECCCCCEEEEEECEEEEECC
VWDFDPFGQSAWSTASLVRGRNWNKTSNNVSYQSPQFYGLDFYGQFSFSNSTSFNGNTTA
CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEECEEEEEEEECCCCCCCCCCCCC
GQPGRAAGAQVTYTNSLFQLRGIYDETRDSNGRFSDVFNYSREYFAGVNVFLGQFKVQAA
CCCCCCCCCEEEEECCEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHEEEEHEEEEEH
YQASRADGSGGPAVNAGVTGTQQVWGGVTWQATPAAALIAAVYHVNANHGGGNANIYTVG
HHHCCCCCCCCCEEECCCCCCHHHHCCEEECCCHHHHHEEHHEEEECCCCCCCCEEEEEC
GSYNISKRTLFDLQVATVRNSKNANFGLNANGAGTAVSTGNPNPGGSQTGVYAGIQHLF
CCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]