Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
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Accession | NC_007510 |
Length | 3,694,126 |
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The map label for this gene is yceA [C]
Identifier: 78067125
GI number: 78067125
Start: 2758058
End: 2758912
Strand: Direct
Name: yceA [C]
Synonym: Bcep18194_A5656
Alternate gene names: 78067125
Gene position: 2758058-2758912 (Clockwise)
Preceding gene: 78067121
Following gene: 78067126
Centisome position: 74.66
GC content: 65.5
Gene sequence:
>855_bases ATGACCATCGTCAACCTCGCCGCCTACCATTTCGTGTCGCTCGACACGAACGAGCAATGGCGCCCGCTCGTCACCGCCCG CTGCAACGAACTCGGCCTGCGCGGCACGATCCTGCTCGCGCCGGAAGGCATCAACCTGTTCATCGCCGGCACGCGCGAAG CCGCCGACGCGTTCATCGCGTACCTCCGCCACGATCCGCTGTTCGAAGGCAAGTTCGCGACGCTGCAGTTCAAGGAAAGC CTGTCCGACTCGCAGCCGTTCCGCCGCATGCTCGTGCGCCTGAAGCGCGAAATCATCACGATGAAGAAGCCGGCGATCAA GCCGGAACTCGGCCGCGCGCCGTTCGTCGACGCGCAGACGCTGAAGACGTGGCTCGACCGCGGCCATGACGACACGGGCC GCCCGGTCGTGATGCTCGACACGCGCAACGCGTTCGAAGTCGACGTCGGCACGTTCGACGACGCGCTCGACTACCGGATC GACAAGTTCAGCGAATTCCCCGAGGTGATCGACGCGAACCGCGCCGACCTCGAAGGCAAGACGGTCGTGTCGTTCTGCAC GGGCGGCATCCGCTGCGAGAAAGCCGCGATCCACATGAAGGAAATCGGCATCGAGAACGTGTACCAGCTCGAAGGCGGGA TCCTGAAATACTTCGAGGAAGTCGGCGGCGCGCACTATCACGGCGACTGCTTCGTGTTCGACTACCGCACCGCGCTGAAC CCGCAACTCCAGCCCACCGAGAACGTCACGTGCTTCGCGTGCCGCGCGGTCGTCACGCCGGAAGCGCAACAGTCGCCGAG CTTCGTGCCCGGCCAGTCGTGCCCGGCCTGCGCACCGGCAGCCAGCGCCGCGTAA
Upstream 100 bases:
>100_bases TGAGCGCGGTTTGCGGGATAATACGGTTTTTCGAATCAACGCCCCGGCTTCGCACCCTTTTTTGCGGGCCGCCGTGCGGC CGTTTTCCCGTCGGACCATC
Downstream 100 bases:
>100_bases GCGCGCACTGCCCCGCGCCCCGATGACCGGCTATCGCGGCCGCTTCGCGCCGTCGCCCACCGGCCCGCTGCATTTCGGCT CGCTGGTCGGCGCACTCGCG
Product: rhodanese superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MTIVNLAAYHFVSLDTNEQWRPLVTARCNELGLRGTILLAPEGINLFIAGTREAADAFIAYLRHDPLFEGKFATLQFKES LSDSQPFRRMLVRLKREIITMKKPAIKPELGRAPFVDAQTLKTWLDRGHDDTGRPVVMLDTRNAFEVDVGTFDDALDYRI DKFSEFPEVIDANRADLEGKTVVSFCTGGIRCEKAAIHMKEIGIENVYQLEGGILKYFEEVGGAHYHGDCFVFDYRTALN PQLQPTENVTCFACRAVVTPEAQQSPSFVPGQSCPACAPAASAA
Sequences:
>Translated_284_residues MTIVNLAAYHFVSLDTNEQWRPLVTARCNELGLRGTILLAPEGINLFIAGTREAADAFIAYLRHDPLFEGKFATLQFKES LSDSQPFRRMLVRLKREIITMKKPAIKPELGRAPFVDAQTLKTWLDRGHDDTGRPVVMLDTRNAFEVDVGTFDDALDYRI DKFSEFPEVIDANRADLEGKTVVSFCTGGIRCEKAAIHMKEIGIENVYQLEGGILKYFEEVGGAHYHGDCFVFDYRTALN PQLQPTENVTCFACRAVVTPEAQQSPSFVPGQSCPACAPAASAA >Mature_283_residues TIVNLAAYHFVSLDTNEQWRPLVTARCNELGLRGTILLAPEGINLFIAGTREAADAFIAYLRHDPLFEGKFATLQFKESL SDSQPFRRMLVRLKREIITMKKPAIKPELGRAPFVDAQTLKTWLDRGHDDTGRPVVMLDTRNAFEVDVGTFDDALDYRID KFSEFPEVIDANRADLEGKTVVSFCTGGIRCEKAAIHMKEIGIENVYQLEGGILKYFEEVGGAHYHGDCFVFDYRTALNP QLQPTENVTCFACRAVVTPEAQQSPSFVPGQSCPACAPAASAA
Specific function: Unknown. [C]
COG id: COG1054
COG function: function code R; Predicted sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rhodanese domain [H]
Homologues:
Organism=Homo sapiens, GI111038120, Length=222, Percent_Identity=34.6846846846847, Blast_Score=125, Evalue=4e-29, Organism=Escherichia coli, GI1787294, Length=217, Percent_Identity=30.8755760368664, Blast_Score=84, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 - InterPro: IPR020936 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: NA
Molecular weight: Translated: 31555; Mature: 31424
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIVNLAAYHFVSLDTNEQWRPLVTARCNELGLRGTILLAPEGINLFIAGTREAADAFIA CEEEEEEEEEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCEEEEECCHHHHHHHHH YLRHDPLFEGKFATLQFKESLSDSQPFRRMLVRLKREIITMKKPAIKPELGRAPFVDAQT HHHCCCCCCCCEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH LKTWLDRGHDDTGRPVVMLDTRNAFEVDVGTFDDALDYRIDKFSEFPEVIDANRADLEGK HHHHHHCCCCCCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHHHCHHHHCCCCCCCCCC TVVSFCTGGIRCEKAAIHMKEIGIENVYQLEGGILKYFEEVGGAHYHGDCFVFDYRTALN EEEEECCCCCEEHHHHHHHHHCCCCCEEHHCCHHHHHHHHHCCCEECCCEEEEEEHHHCC PQLQPTENVTCFACRAVVTPEAQQSPSFVPGQSCPACAPAASAA CCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TIVNLAAYHFVSLDTNEQWRPLVTARCNELGLRGTILLAPEGINLFIAGTREAADAFIA EEEEEEEEEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCEEEEECCHHHHHHHHH YLRHDPLFEGKFATLQFKESLSDSQPFRRMLVRLKREIITMKKPAIKPELGRAPFVDAQT HHHCCCCCCCCEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH LKTWLDRGHDDTGRPVVMLDTRNAFEVDVGTFDDALDYRIDKFSEFPEVIDANRADLEGK HHHHHHCCCCCCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHHHCHHHHCCCCCCCCCC TVVSFCTGGIRCEKAAIHMKEIGIENVYQLEGGILKYFEEVGGAHYHGDCFVFDYRTALN EEEEECCCCCEEHHHHHHHHHCCCCCEEHHCCHHHHHHHHHCCCEECCCEEEEEEHHHCC PQLQPTENVTCFACRAVVTPEAQQSPSFVPGQSCPACAPAASAA CCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA