Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
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Accession | NC_007510 |
Length | 3,694,126 |
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The map label for this gene is gluQ [H]
Identifier: 78067126
GI number: 78067126
Start: 2758935
End: 2759828
Strand: Direct
Name: gluQ [H]
Synonym: Bcep18194_A5657
Alternate gene names: 78067126
Gene position: 2758935-2759828 (Clockwise)
Preceding gene: 78067125
Following gene: 78067131
Centisome position: 74.68
GC content: 71.92
Gene sequence:
>894_bases ATGACCGGCTATCGCGGCCGCTTCGCGCCGTCGCCCACCGGCCCGCTGCATTTCGGCTCGCTGGTCGGCGCACTCGCGAG CTGGCTCGACGCGCGCGCGCACGGCGGCGCATGGCTCGTGCGCATCGAGGATCTCGACGGCCCGCGCACGGTGCCCGGCG CCGCCGACGACATCCTCGCGACGCTCGCGCATTTCGGCATGACGCCCGACGAGCCGCCCGTCTGGCAGAGCACGCGCGAT GCGGCCTATACGGCTGCGCTCGAACGGCTCGTCGCGGCGGGGCGCGTTTATCCGTGCGGCTGCACGCGCAAGGAAATCGC CGATTCACTGCGCGCCGCGCACGAGCGCCACACGACGCTCGCGTACCCGGGCACCTGCCGCACCGGCCTGCACGGCAAGC CCGCGCGCGCGTGGCGGCTACGCGTGCCGGATGGCGACGACGCGATCGTCACGTTCGACGATCGCTGGCAGCACACCCAA TCGCAGAACCTCGCGACCGAAGTCGGCGATTTCGTGCTGAAGCGCGCGGACGGCCAATGGGCCTATCAACTCGCGGTCGT CGTCGACGATGCCAATGCGCACATCACGCACGTCGTGCGCGGCGCCGACCTGCTCGACTCGACCGCGCGCCAGATCCACC TGCAGCACTGCCTCGGCGTGCCGACGCCGCAGTACCTGCACGTGCCCGTCGTCGTCGATGAGAACGGCGAAAAGCTCAGC AAGCAGACGGGCGCAACCGCGCTCGAACGCGACGACCCGCTGCCGGCGCTGCAGGCCGCGGCCGCTCATCTAGGCCTCGC GCCCGACGGTGCGCTCGCGGGCACGACGCTCGATTCGTTCTACGCCGCCGCCACGGCCGCGTGGGCAATGCGCTTCGGGC CGCAGGCCGGCTGA
Upstream 100 bases:
>100_bases CCGGAAGCGCAACAGTCGCCGAGCTTCGTGCCCGGCCAGTCGTGCCCGGCCTGCGCACCGGCAGCCAGCGCCGCGTAAGC GCGCACTGCCCCGCGCCCCG
Downstream 100 bases:
>100_bases CGCGCGCAGCGCGCCGGTTTCGCGGCGATCCGGCGTAAGCCGGGGGCAACTGAATCGTTCGCCGCCGGCGCCTCGCGCCC GCTCCCACTTCCGCTTCCGC
Product: glutamyl-Q tRNA(Asp) synthetase
Products: NA
Alternate protein names: Glu-Q-RSs [H]
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MTGYRGRFAPSPTGPLHFGSLVGALASWLDARAHGGAWLVRIEDLDGPRTVPGAADDILATLAHFGMTPDEPPVWQSTRD AAYTAALERLVAAGRVYPCGCTRKEIADSLRAAHERHTTLAYPGTCRTGLHGKPARAWRLRVPDGDDAIVTFDDRWQHTQ SQNLATEVGDFVLKRADGQWAYQLAVVVDDANAHITHVVRGADLLDSTARQIHLQHCLGVPTPQYLHVPVVVDENGEKLS KQTGATALERDDPLPALQAAAAHLGLAPDGALAGTTLDSFYAAATAAWAMRFGPQAG
Sequences:
>Translated_297_residues MTGYRGRFAPSPTGPLHFGSLVGALASWLDARAHGGAWLVRIEDLDGPRTVPGAADDILATLAHFGMTPDEPPVWQSTRD AAYTAALERLVAAGRVYPCGCTRKEIADSLRAAHERHTTLAYPGTCRTGLHGKPARAWRLRVPDGDDAIVTFDDRWQHTQ SQNLATEVGDFVLKRADGQWAYQLAVVVDDANAHITHVVRGADLLDSTARQIHLQHCLGVPTPQYLHVPVVVDENGEKLS KQTGATALERDDPLPALQAAAAHLGLAPDGALAGTTLDSFYAAATAAWAMRFGPQAG >Mature_296_residues TGYRGRFAPSPTGPLHFGSLVGALASWLDARAHGGAWLVRIEDLDGPRTVPGAADDILATLAHFGMTPDEPPVWQSTRDA AYTAALERLVAAGRVYPCGCTRKEIADSLRAAHERHTTLAYPGTCRTGLHGKPARAWRLRVPDGDDAIVTFDDRWQHTQS QNLATEVGDFVLKRADGQWAYQLAVVVDDANAHITHVVRGADLLDSTARQIHLQHCLGVPTPQYLHVPVVVDENGEKLSK QTGATALERDDPLPALQAAAAHLGLAPDGALAGTTLDSFYAAATAAWAMRFGPQAG
Specific function: Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble positi
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=261, Percent_Identity=36.3984674329502, Blast_Score=153, Evalue=2e-37, Organism=Escherichia coli, GI226510925, Length=295, Percent_Identity=41.6949152542373, Blast_Score=210, Evalue=1e-55, Organism=Escherichia coli, GI1788743, Length=252, Percent_Identity=35.7142857142857, Blast_Score=158, Evalue=4e-40, Organism=Caenorhabditis elegans, GI71993394, Length=303, Percent_Identity=30.3630363036304, Blast_Score=132, Evalue=3e-31, Organism=Saccharomyces cerevisiae, GI6324540, Length=297, Percent_Identity=34.006734006734, Blast_Score=140, Evalue=2e-34, Organism=Drosophila melanogaster, GI24665321, Length=262, Percent_Identity=34.7328244274809, Blast_Score=131, Evalue=5e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022380 - InterPro: IPR000924 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: NA
Molecular weight: Translated: 31771; Mature: 31640
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGYRGRFAPSPTGPLHFGSLVGALASWLDARAHGGAWLVRIEDLDGPRTVPGAADDILA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHH TLAHFGMTPDEPPVWQSTRDAAYTAALERLVAAGRVYPCGCTRKEIADSLRAAHERHTTL HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCEE AYPGTCRTGLHGKPARAWRLRVPDGDDAIVTFDDRWQHTQSQNLATEVGDFVLKRADGQW ECCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCE AYQLAVVVDDANAHITHVVRGADLLDSTARQIHLQHCLGVPTPQYLHVPVVVDENGEKLS EEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHH KQTGATALERDDPLPALQAAAAHLGLAPDGALAGTTLDSFYAAATAAWAMRFGPQAG HHHCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TGYRGRFAPSPTGPLHFGSLVGALASWLDARAHGGAWLVRIEDLDGPRTVPGAADDILA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHH TLAHFGMTPDEPPVWQSTRDAAYTAALERLVAAGRVYPCGCTRKEIADSLRAAHERHTTL HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCEE AYPGTCRTGLHGKPARAWRLRVPDGDDAIVTFDDRWQHTQSQNLATEVGDFVLKRADGQW ECCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCE AYQLAVVVDDANAHITHVVRGADLLDSTARQIHLQHCLGVPTPQYLHVPVVVDENGEKLS EEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHH KQTGATALERDDPLPALQAAAAHLGLAPDGALAGTTLDSFYAAATAAWAMRFGPQAG HHHCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA