| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78067015
Identifier: 78067015
GI number: 78067015
Start: 2644652
End: 2645869
Strand: Direct
Name: 78067015
Synonym: Bcep18194_A5546
Alternate gene names: NA
Gene position: 2644652-2645869 (Clockwise)
Preceding gene: 78067011
Following gene: 78067016
Centisome position: 71.59
GC content: 65.6
Gene sequence:
>1218_bases ATGCGCCAGCGAATCGCCAAACGCCTCCCCCCCGATGCCGACAAACTGGTCGGTCTGTCGCTTGCGCTCTTCGCGTCGGG CAGCCGCATCGAGGATCGCTTCTGGGAAGCGAAGCTCGACGCGCTGCTCGCCAAGATTGTCCGCAACGGCAACCAGACCA CGCTCGACGCAGCGCTCGACCATCTTCAGCAGAATCACCCCGACGCCTATGGCGCGCTCGCCGACATGGCCGAGACGCAC AGCGAGTCGATGGTGATCGAGCACGAAGGCCAACCGTTCGATGCGCTGCTGGTCGCCGTCCCGGTTCTCGCATGGACGCG CTACATGATTCCGTCGGGCCCGCTCAAGGGCGACGTTGCCGACGCGCTGCGAACACACCTGCAGGCGCACGTGCTTGCGA ACGGCACCCTCGTCGGGCTTGCCCCGTTCCTCTACAGCATCGACCAGTTGCCGCGCCACCATGTCGAGACCTACCGGCTC GCCCAGCAGCTCGCGCATGCGGCGATCAGCCAGCACACGCCCAAGCTCAGCTTCGGCGACCTGCCCGAAACCTCGCCGAT CCTGGCCGACCCGCGCTTCCTGCTCGCCGTCGTCGCGGCCCCCGCTGGCGCACCACTGTTCCGCTGGCAGGAAGAAGAAA GCGGCAGCCGGATCGAACGTGGTCAGTGCCTCGAGCAATGGACGGCCCAGGGCGGCCCGAACCTGTCGATTGCCCTGCCC GGCTGCGAGTTCGAATGCCTGCTTCCGGACGCGTACTATTCCGCCTGCCGCGATGCGGACGAACGTGTGCGTCCGCACAC GGTGAGAACGGCCATTCGTTATCTTTTCGACACACTTGGTGCAGCACCGCAAGAGCTGCGCGCGGTGGTCGCCGGCTTCG GCGAACGCCGTATCGACGAGTACCGTGTCGGCTTCACGCGGCGTGCCAGCAACGACGTAATTTACGGCGTCGTATGGCCG CTCTACGGCCGTGAAAACGGCGACGTGTCGATCGACAGCGCAACGCTCGAAGGCGAAGCACCGATCGAAGGGCCGGTCGA GGAAATCGTGAGCCTGCTGAAGGAATGCGGCGTAACCGACGTCCGGCGGCACGCGGGCCGCTTCGAACCCGAATACTGCG ATGACTGCGGCGTGCCGCTTTACGCGGATCCGCTCGGCGAAATCGTCCACGCAGAAATGCCGGAAGACGCGTCACCCGCG CAGCCGCATTTCCACTGA
Upstream 100 bases:
>100_bases AATTCGGCCGGCCGGCCATGCCTCGGCACGAGACCGCTTATGGTGCAAAGAACGGACTAGAATGTGAGGTTCTTCGCCTC TTTCTATATACGTCTTTAAT
Downstream 100 bases:
>100_bases CCCGCAGCACAGCAGGCCCTGATGGCCTGCCCACCTGAAGCCGCTCACGGTTCCCGCCGGAGCGGCTTTTTACTTGTCTG CCCTCCCGCCGCCCGAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MRQRIAKRLPPDADKLVGLSLALFASGSRIEDRFWEAKLDALLAKIVRNGNQTTLDAALDHLQQNHPDAYGALADMAETH SESMVIEHEGQPFDALLVAVPVLAWTRYMIPSGPLKGDVADALRTHLQAHVLANGTLVGLAPFLYSIDQLPRHHVETYRL AQQLAHAAISQHTPKLSFGDLPETSPILADPRFLLAVVAAPAGAPLFRWQEEESGSRIERGQCLEQWTAQGGPNLSIALP GCEFECLLPDAYYSACRDADERVRPHTVRTAIRYLFDTLGAAPQELRAVVAGFGERRIDEYRVGFTRRASNDVIYGVVWP LYGRENGDVSIDSATLEGEAPIEGPVEEIVSLLKECGVTDVRRHAGRFEPEYCDDCGVPLYADPLGEIVHAEMPEDASPA QPHFH
Sequences:
>Translated_405_residues MRQRIAKRLPPDADKLVGLSLALFASGSRIEDRFWEAKLDALLAKIVRNGNQTTLDAALDHLQQNHPDAYGALADMAETH SESMVIEHEGQPFDALLVAVPVLAWTRYMIPSGPLKGDVADALRTHLQAHVLANGTLVGLAPFLYSIDQLPRHHVETYRL AQQLAHAAISQHTPKLSFGDLPETSPILADPRFLLAVVAAPAGAPLFRWQEEESGSRIERGQCLEQWTAQGGPNLSIALP GCEFECLLPDAYYSACRDADERVRPHTVRTAIRYLFDTLGAAPQELRAVVAGFGERRIDEYRVGFTRRASNDVIYGVVWP LYGRENGDVSIDSATLEGEAPIEGPVEEIVSLLKECGVTDVRRHAGRFEPEYCDDCGVPLYADPLGEIVHAEMPEDASPA QPHFH >Mature_405_residues MRQRIAKRLPPDADKLVGLSLALFASGSRIEDRFWEAKLDALLAKIVRNGNQTTLDAALDHLQQNHPDAYGALADMAETH SESMVIEHEGQPFDALLVAVPVLAWTRYMIPSGPLKGDVADALRTHLQAHVLANGTLVGLAPFLYSIDQLPRHHVETYRL AQQLAHAAISQHTPKLSFGDLPETSPILADPRFLLAVVAAPAGAPLFRWQEEESGSRIERGQCLEQWTAQGGPNLSIALP GCEFECLLPDAYYSACRDADERVRPHTVRTAIRYLFDTLGAAPQELRAVVAGFGERRIDEYRVGFTRRASNDVIYGVVWP LYGRENGDVSIDSATLEGEAPIEGPVEEIVSLLKECGVTDVRRHAGRFEPEYCDDCGVPLYADPLGEIVHAEMPEDASPA QPHFH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44560; Mature: 44560
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQRIAKRLPPDADKLVGLSLALFASGSRIEDRFWEAKLDALLAKIVRNGNQTTLDAALD CCHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH HLQQNHPDAYGALADMAETHSESMVIEHEGQPFDALLVAVPVLAWTRYMIPSGPLKGDVA HHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH DALRTHLQAHVLANGTLVGLAPFLYSIDQLPRHHVETYRLAQQLAHAAISQHTPKLSFGD HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC LPETSPILADPRFLLAVVAAPAGAPLFRWQEEESGSRIERGQCLEQWTAQGGPNLSIALP CCCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEC GCEFECLLPDAYYSACRDADERVRPHTVRTAIRYLFDTLGAAPQELRAVVAGFGERRIDE CCCEEEECCHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH YRVGFTRRASNDVIYGVVWPLYGRENGDVSIDSATLEGEAPIEGPVEEIVSLLKECGVTD HHCCCEECCCCCEEEEEEEEECCCCCCCEEEECCEECCCCCCCCHHHHHHHHHHHCCCHH VRRHAGRFEPEYCDDCGVPLYADPLGEIVHAEMPEDASPAQPHFH HHHHCCCCCCCHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MRQRIAKRLPPDADKLVGLSLALFASGSRIEDRFWEAKLDALLAKIVRNGNQTTLDAALD CCHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH HLQQNHPDAYGALADMAETHSESMVIEHEGQPFDALLVAVPVLAWTRYMIPSGPLKGDVA HHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH DALRTHLQAHVLANGTLVGLAPFLYSIDQLPRHHVETYRLAQQLAHAAISQHTPKLSFGD HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC LPETSPILADPRFLLAVVAAPAGAPLFRWQEEESGSRIERGQCLEQWTAQGGPNLSIALP CCCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEC GCEFECLLPDAYYSACRDADERVRPHTVRTAIRYLFDTLGAAPQELRAVVAGFGERRIDE CCCEEEECCHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH YRVGFTRRASNDVIYGVVWPLYGRENGDVSIDSATLEGEAPIEGPVEEIVSLLKECGVTD HHCCCEECCCCCEEEEEEEEECCCCCCCEEEECCEECCCCCCCCHHHHHHHHHHHCCCHH VRRHAGRFEPEYCDDCGVPLYADPLGEIVHAEMPEDASPAQPHFH HHHHCCCCCCCHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA