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The map label for this gene is csgD [C]

Identifier: 78067016

GI number: 78067016

Start: 2646083

End: 2646919

Strand: Direct

Name: csgD [C]

Synonym: Bcep18194_A5547

Alternate gene names: 78067016

Gene position: 2646083-2646919 (Clockwise)

Preceding gene: 78067015

Following gene: 78067017

Centisome position: 71.63

GC content: 67.62

Gene sequence:

>837_bases
ATGCGGTTCCTGATGCTCAATTCAGACGCCGAGCGGCGTGACGGACTGAAGGCCCTGTTGCGACAGATCGACCGTCACGC
CGGCATCAACGACGCGCCCGACAGTTTCCAGGCGCGCAGGCTGCTGCGTAACCAGCGCTTCGACCTCGTCGCGATCGACT
GGCTCGACGTCGGCCGGCTCAGCGAGCTTCAGGCGATCTGCAACGCTTGCTCGCCGACACCCGTCGCCGTCCTGGTCGAC
GAAACATCGCCCGAAGCCATCCAGCGCTTCTTCAACTACGGTGTTGCCGGCGTGATCCCGCATTCCACGCGCCCACACCT
GATCGTGCGTGCGCTCGAGATCGTGCTGCTGGGCGGGCACTACATCCCGCCGATCGCGCTCCGCCTGCTGCCCTCTACTG
CTGCGGCGCGCTACGATGCCCATTTCCAGACACTCGCCGGGTCACTTCCCCGCCGGCCGCCCAGCGGCCTCTTGTCGCCA
CGGCAGGCGCAGATCATGCGCTTCGTCCACATGGGCAGCACCAACAAGATGATCGCCCGCACACTCGGCATCAGCGAGGG
CACCGTCAAGATCCATCTCGCCAGCATCTTCCAGCAGCTTGGTGCCGCCAACCGCGCCGCCGCGGTGGCGATCTACAACG
GCTGGCTGTCGCCCCACCTCGAGGTGCTGCTGGCGAACCGCAGTCGCGCGCGCAAGCCGCCCATCGGCGAACACGGCCCG
GTGCCGCTGCGTACGCAACGGAATGACCGCCCGTACCCGTTGCCTGCCTCGATCGACAGCGCGCAGGACCTGCCGATCGC
CGCCGAGCCACCGGCGCGGTTCCGGCGGGAACGCTAG

Upstream 100 bases:

>100_bases
AAGCCTTTCAGCCAAGCAGACATCGTGTAAGGTCTTTGTCATCATCAGACCCAAGGCATGCCAGACGGCAGATCAATGGC
TCACATAATGGAGGTTGAAT

Downstream 100 bases:

>100_bases
GCAAACAGTCTCGATATTGCGACGGTCGGCGTGTGCGGATTCCCACCTTTGATGCTCAACGAGTAATATGGACGCATGGG
TTTTCTTTTCACACCGCTTC

Product: two component LuxR family transcriptional regulator

Products: NA

Alternate protein names: Two Component Transcriptional Regulator LuxR Family; Two-Component Response Regulator; Transcriptional Regulator LuxR Family; Response Regulator; Glycerol Metabolism Activator AgmR; LuxR Family Two Component Transcriptional Regulator

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MRFLMLNSDAERRDGLKALLRQIDRHAGINDAPDSFQARRLLRNQRFDLVAIDWLDVGRLSELQAICNACSPTPVAVLVD
ETSPEAIQRFFNYGVAGVIPHSTRPHLIVRALEIVLLGGHYIPPIALRLLPSTAAARYDAHFQTLAGSLPRRPPSGLLSP
RQAQIMRFVHMGSTNKMIARTLGISEGTVKIHLASIFQQLGAANRAAAVAIYNGWLSPHLEVLLANRSRARKPPIGEHGP
VPLRTQRNDRPYPLPASIDSAQDLPIAAEPPARFRRER

Sequences:

>Translated_278_residues
MRFLMLNSDAERRDGLKALLRQIDRHAGINDAPDSFQARRLLRNQRFDLVAIDWLDVGRLSELQAICNACSPTPVAVLVD
ETSPEAIQRFFNYGVAGVIPHSTRPHLIVRALEIVLLGGHYIPPIALRLLPSTAAARYDAHFQTLAGSLPRRPPSGLLSP
RQAQIMRFVHMGSTNKMIARTLGISEGTVKIHLASIFQQLGAANRAAAVAIYNGWLSPHLEVLLANRSRARKPPIGEHGP
VPLRTQRNDRPYPLPASIDSAQDLPIAAEPPARFRRER
>Mature_278_residues
MRFLMLNSDAERRDGLKALLRQIDRHAGINDAPDSFQARRLLRNQRFDLVAIDWLDVGRLSELQAICNACSPTPVAVLVD
ETSPEAIQRFFNYGVAGVIPHSTRPHLIVRALEIVLLGGHYIPPIALRLLPSTAAARYDAHFQTLAGSLPRRPPSGLLSP
RQAQIMRFVHMGSTNKMIARTLGISEGTVKIHLASIFQQLGAANRAAAVAIYNGWLSPHLEVLLANRSRARKPPIGEHGP
VPLRTQRNDRPYPLPASIDSAQDLPIAAEPPARFRRER

Specific function: Necessary For Transcription Of The Csgab Operon. May Have The Capability To Respond To Starvation And/Or High Cell Density By Activating Csgba Transcription. [C]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30771; Mature: 30771

Theoretical pI: Translated: 11.20; Mature: 11.20

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFLMLNSDAERRDGLKALLRQIDRHAGINDAPDSFQARRLLRNQRFDLVAIDWLDVGRL
CEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHH
SELQAICNACSPTPVAVLVDETSPEAIQRFFNYGVAGVIPHSTRPHLIVRALEIVLLGGH
HHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHCCCC
YIPPIALRLLPSTAAARYDAHFQTLAGSLPRRPPSGLLSPRQAQIMRFVHMGSTNKMIAR
CCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHH
TLGISEGTVKIHLASIFQQLGAANRAAAVAIYNGWLSPHLEVLLANRSRARKPPIGEHGP
HHCCCCCEEEEEHHHHHHHHCCCCCCEEEEEECCCCCCCHHHEECCCHHCCCCCCCCCCC
VPLRTQRNDRPYPLPASIDSAQDLPIAAEPPARFRRER
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC
>Mature Secondary Structure
MRFLMLNSDAERRDGLKALLRQIDRHAGINDAPDSFQARRLLRNQRFDLVAIDWLDVGRL
CEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHH
SELQAICNACSPTPVAVLVDETSPEAIQRFFNYGVAGVIPHSTRPHLIVRALEIVLLGGH
HHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHCCCC
YIPPIALRLLPSTAAARYDAHFQTLAGSLPRRPPSGLLSPRQAQIMRFVHMGSTNKMIAR
CCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHH
TLGISEGTVKIHLASIFQQLGAANRAAAVAIYNGWLSPHLEVLLANRSRARKPPIGEHGP
HHCCCCCEEEEEHHHHHHHHCCCCCCEEEEEECCCCCCCHHHEECCCHHCCCCCCCCCCC
VPLRTQRNDRPYPLPASIDSAQDLPIAAEPPARFRRER
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA