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The map label for this gene is ygeA [H]

Identifier: 78066918

GI number: 78066918

Start: 2524211

End: 2524903

Strand: Direct

Name: ygeA [H]

Synonym: Bcep18194_A5449

Alternate gene names: 78066918

Gene position: 2524211-2524903 (Clockwise)

Preceding gene: 78066916

Following gene: 78066923

Centisome position: 68.33

GC content: 67.39

Gene sequence:

>693_bases
ATGAAGACGATCGGATTGATCGGCGGGATGAGCTGGGAATCGTCCGCCGAGTACTACCGGATGATCAATCGCCATTCGAA
GGCGTTGCACGGCGGGCACCACAACGCGAAGAGCGTGCTGGTGACGGTCGATTTCGCCGAGATCGAGGCGCTGCAGCGCA
CGCACGACTGGGCCGCGCTCGGCGAACGGATGGCCGGCGCCGCGCGACAGCTCGAAGCGGCCGGTGCCGATCTCGTCGTG
CTGACCACCAATACGATGCATCGCGTGTGCGATGCGATCGAAGCCGCGGTGACGCTGCCGTTCCTGCACATCGCCGATCC
GACAGGCAGTGCGCTGCGCGATGCGGGCGTCGAGCGCGTCGCGCTGCTCGGCACGCGCTACACGATGGAGTTGCCGTTCT
ACGCGGAGCGGCTGCGCGGCAAGTTCGGGATGGAGGTGCTCGTGCCGGACGAACGCGGGCGCGACGACGTGCACCGGATC
ATCTACGACGAGCTGTGCCACGGCATCATCTCGCCGGAATCGCGCGCGACGTACGTGACGATCATCGAGGAACTGGCCCG
GCGCGGCGCGCAGGCCGTGATCCTCGGCTGTACGGAAATCACGCTGCTGATCGGCGCGGACGACTCGCCGCTGCCGGTGT
TCGACACGACCGCGTTGCACGCGAAGGCGGCGGTCGAGTGGGCGGCACGCTGA

Upstream 100 bases:

>100_bases
CGGCGCCGTACTGGCCCGCTTTGCGCGGATCGTACCGGCCGGGCGCGGAGAGCGGCGCCTATACTCGTCTGCCGCAATAC
ACGAAACGCACAGGTGACGG

Downstream 100 bases:

>100_bases
CCGGGCCCGCCGCTGCGATGCGGCCGATGACGCGAACGCGTCCCGGCACAATGGGCCGCTCGCCTCGACCGAACGGCCTC
AGGAGCGGGAAGTAGCGAGG

Product: aspartate racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MKTIGLIGGMSWESSAEYYRMINRHSKALHGGHHNAKSVLVTVDFAEIEALQRTHDWAALGERMAGAARQLEAAGADLVV
LTTNTMHRVCDAIEAAVTLPFLHIADPTGSALRDAGVERVALLGTRYTMELPFYAERLRGKFGMEVLVPDERGRDDVHRI
IYDELCHGIISPESRATYVTIIEELARRGAQAVILGCTEITLLIGADDSPLPVFDTTALHAKAAVEWAAR

Sequences:

>Translated_230_residues
MKTIGLIGGMSWESSAEYYRMINRHSKALHGGHHNAKSVLVTVDFAEIEALQRTHDWAALGERMAGAARQLEAAGADLVV
LTTNTMHRVCDAIEAAVTLPFLHIADPTGSALRDAGVERVALLGTRYTMELPFYAERLRGKFGMEVLVPDERGRDDVHRI
IYDELCHGIISPESRATYVTIIEELARRGAQAVILGCTEITLLIGADDSPLPVFDTTALHAKAAVEWAAR
>Mature_230_residues
MKTIGLIGGMSWESSAEYYRMINRHSKALHGGHHNAKSVLVTVDFAEIEALQRTHDWAALGERMAGAARQLEAAGADLVV
LTTNTMHRVCDAIEAAVTLPFLHIADPTGSALRDAGVERVALLGTRYTMELPFYAERLRGKFGMEVLVPDERGRDDVHRI
IYDELCHGIISPESRATYVTIIEELARRGAQAVILGCTEITLLIGADDSPLPVFDTTALHAKAAVEWAAR

Specific function: Unknown

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

Organism=Escherichia coli, GI1789205, Length=227, Percent_Identity=54.1850220264317, Blast_Score=238, Evalue=2e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004380 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: NA

Molecular weight: Translated: 25159; Mature: 25159

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIGLIGGMSWESSAEYYRMINRHSKALHGGHHNAKSVLVTVDFAEIEALQRTHDWAAL
CCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHH
GERMAGAARQLEAAGADLVVLTTNTMHRVCDAIEAAVTLPFLHIADPTGSALRDAGVERV
HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCEEEECCCCCHHHHHCCHHHE
ALLGTRYTMELPFYAERLRGKFGMEVLVPDERGRDDVHRIIYDELCHGIISPESRATYVT
EHCCCEEEEECCHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHH
IIEELARRGAQAVILGCTEITLLIGADDSPLPVFDTTALHAKAAVEWAAR
HHHHHHHCCCCEEEEEEEEEEEEEECCCCCCCEECCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKTIGLIGGMSWESSAEYYRMINRHSKALHGGHHNAKSVLVTVDFAEIEALQRTHDWAAL
CCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHH
GERMAGAARQLEAAGADLVVLTTNTMHRVCDAIEAAVTLPFLHIADPTGSALRDAGVERV
HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCEEEECCCCCHHHHHCCHHHE
ALLGTRYTMELPFYAERLRGKFGMEVLVPDERGRDDVHRIIYDELCHGIISPESRATYVT
EHCCCEEEEECCHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHH
IIEELARRGAQAVILGCTEITLLIGADDSPLPVFDTTALHAKAAVEWAAR
HHHHHHHCCCCEEEEEEEEEEEEEECCCCCCCEECCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6350602; 2836407; 9278503 [H]