| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066709
Identifier: 78066709
GI number: 78066709
Start: 2294950
End: 2295492
Strand: Reverse
Name: 78066709
Synonym: Bcep18194_A5240
Alternate gene names: NA
Gene position: 2295492-2294950 (Counterclockwise)
Preceding gene: 78066710
Following gene: 78066706
Centisome position: 62.14
GC content: 57.27
Gene sequence:
>543_bases ATGAGCGCGCGAGAACGTTTCCTCGAAAAGATTCAGCCGATCCCGATGTGCGGGTGCTGGGCGTGGGAGGGCTACGTCGA CGCAGAGATGGGATACGGCATGTTCTGGCTCAACGGATCCATGCAACTGTCCCATCGCGTCTCGTACATGCTGTTCAACG GCGATATTCCCAGCGGCTTGCATGTGCTGCACCGGTGTGATGTTCCGTGCTGCGCGAATCCTAACCATCTTTGGCTCGGA ACCAACGATCAGAACGTCCAGGACAAGGTCGCGAAAGGGCGCGCCGCGCGTCTACGCGGCACAGATCATCCGGCAGCAAA GGTCGACGAGTCCATCGTCAGGATGATCCGGCGTTCGCCCCAGTCTGCACGTGTGCTTGCGCGGGAACCCTCGATCAGCA GCCACTCCGAACGGCATGCCGGATCGATTGGCGCTGTGGGATTCCTGCAAAAAGGCATTGAACGTCAGTTAGATCGATCA GATGCAGTCGATACGCCCATGAGCGATTTCAAATCTTCAATATTGGATTTGTTGGCGGGATGA
Upstream 100 bases:
>100_bases AGGCGGCGGGCTTCACGTACCAGTGGCAGGCCACAAACGCGGGCTGCAGCGATCGATCGGCGCATCTCTGGGCCAACGGT GTACGGCAAGGAGCGCCGGC
Downstream 100 bases:
>100_bases GAATCTACCCACGAGACATTTTTGCGGATGCATTTAGCCGGTACTCCGGCCCATAACTCAGCTTCTGGAATGGAGTTTGT AACCACCGAGCCTATTCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: Bacteriophage T7-Like Gene Protein; Bacteriophage T7-Related Protein Protein; Phage Protein
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MSARERFLEKIQPIPMCGCWAWEGYVDAEMGYGMFWLNGSMQLSHRVSYMLFNGDIPSGLHVLHRCDVPCCANPNHLWLG TNDQNVQDKVAKGRAARLRGTDHPAAKVDESIVRMIRRSPQSARVLAREPSISSHSERHAGSIGAVGFLQKGIERQLDRS DAVDTPMSDFKSSILDLLAG
Sequences:
>Translated_180_residues MSARERFLEKIQPIPMCGCWAWEGYVDAEMGYGMFWLNGSMQLSHRVSYMLFNGDIPSGLHVLHRCDVPCCANPNHLWLG TNDQNVQDKVAKGRAARLRGTDHPAAKVDESIVRMIRRSPQSARVLAREPSISSHSERHAGSIGAVGFLQKGIERQLDRS DAVDTPMSDFKSSILDLLAG >Mature_179_residues SARERFLEKIQPIPMCGCWAWEGYVDAEMGYGMFWLNGSMQLSHRVSYMLFNGDIPSGLHVLHRCDVPCCANPNHLWLGT NDQNVQDKVAKGRAARLRGTDHPAAKVDESIVRMIRRSPQSARVLAREPSISSHSERHAGSIGAVGFLQKGIERQLDRSD AVDTPMSDFKSSILDLLAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20007; Mature: 19876
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARERFLEKIQPIPMCGCWAWEGYVDAEMGYGMFWLNGSMQLSHRVSYMLFNGDIPSGL CCHHHHHHHHCCCCCCCCEECCCCEEECCCCCEEEEECCCEEECCCEEEEEECCCCCHHH HVLHRCDVPCCANPNHLWLGTNDQNVQDKVAKGRAARLRGTDHPAAKVDESIVRMIRRSP HHHHHCCCCCCCCCCEEEECCCCCCHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHCCC QSARVLAREPSISSHSERHAGSIGAVGFLQKGIERQLDRSDAVDTPMSDFKSSILDLLAG CHHEEEECCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure SARERFLEKIQPIPMCGCWAWEGYVDAEMGYGMFWLNGSMQLSHRVSYMLFNGDIPSGL CHHHHHHHHCCCCCCCCEECCCCEEECCCCCEEEEECCCEEECCCEEEEEECCCCCHHH HVLHRCDVPCCANPNHLWLGTNDQNVQDKVAKGRAARLRGTDHPAAKVDESIVRMIRRSP HHHHHCCCCCCCCCCEEEECCCCCCHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHCCC QSARVLAREPSISSHSERHAGSIGAVGFLQKGIERQLDRSDAVDTPMSDFKSSILDLLAG CHHEEEECCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA