| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066706
Identifier: 78066706
GI number: 78066706
Start: 2293279
End: 2293914
Strand: Reverse
Name: 78066706
Synonym: Bcep18194_A5237
Alternate gene names: NA
Gene position: 2293914-2293279 (Counterclockwise)
Preceding gene: 78066709
Following gene: 78066705
Centisome position: 62.1
GC content: 65.25
Gene sequence:
>636_bases ATGACCCGATGCAGCCATGACGTCGCGCTCGAGCAGCGCTGCGAGAAGTGCACGGCCGAGGGGCTCGCGAGCCTCCCGAA GATCGCCGGCGAGCATGCCGTACGCGTGACAGACGTCGAGATCGAGTATTACCCGGACCACGCTGCTCCGCGCACCGAGT CGGCGACGTTCCGCCACACGAAGAAGGTCGGGCACGCGGCCGGCCTGCGCTGCTCGATCAGCGGTCAGCCCGCACCCGAG TATCACCACCTGTTTTGCGCGTGGGCGGATTCCGATGGCGTCGACTGGGCGACCGTGCGCGGCATCGCGCTCGGTCAGAT CAAGGAAATCCCCGTGCTCGATCCCGAGACCGACCAGCCGACGAAGGAACTGTATCCCGCCGAGGAATCCTTCATCTGGC TCATCTGCAAGCTGGTCGAGCTGCGCGGCTTCGACTGGCATGCGTTCGACCCGGCGAAGCCCGAGACCTTCGTCGACGCG ATGGTGAACATGCTGCCGCTCTCGGCGAAGTTTCATCGGTCGCCGACGCATGGCATCCATCACCGGTCGTTCCCGACCTA CGTATTCCAGGCGTTCCCGCGCAAGGCCGGGTTCGTCTTCACCCCGGACGAGCTCGTCCAGTCCAAGAAGGAGTAG
Upstream 100 bases:
>100_bases TTCGACTTGGTGGGAATCCATTTCTGACAAGGGGTTCCGCTCTTGATCGTCATTTGATCGCCCGGCCGCGCGCCGGGCTT TTTCGTTTTTGGAACAAGAC
Downstream 100 bases:
>100_bases CTATGCCGAGATCCATTCTGCAAACCGGCGCTGTCACGTTCACCGCGTCGTCGTTCGTCCCGCTCATCGATTGGGCCGCA TCCGCGATGGGTGTGAAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MTRCSHDVALEQRCEKCTAEGLASLPKIAGEHAVRVTDVEIEYYPDHAAPRTESATFRHTKKVGHAAGLRCSISGQPAPE YHHLFCAWADSDGVDWATVRGIALGQIKEIPVLDPETDQPTKELYPAEESFIWLICKLVELRGFDWHAFDPAKPETFVDA MVNMLPLSAKFHRSPTHGIHHRSFPTYVFQAFPRKAGFVFTPDELVQSKKE
Sequences:
>Translated_211_residues MTRCSHDVALEQRCEKCTAEGLASLPKIAGEHAVRVTDVEIEYYPDHAAPRTESATFRHTKKVGHAAGLRCSISGQPAPE YHHLFCAWADSDGVDWATVRGIALGQIKEIPVLDPETDQPTKELYPAEESFIWLICKLVELRGFDWHAFDPAKPETFVDA MVNMLPLSAKFHRSPTHGIHHRSFPTYVFQAFPRKAGFVFTPDELVQSKKE >Mature_210_residues TRCSHDVALEQRCEKCTAEGLASLPKIAGEHAVRVTDVEIEYYPDHAAPRTESATFRHTKKVGHAAGLRCSISGQPAPEY HHLFCAWADSDGVDWATVRGIALGQIKEIPVLDPETDQPTKELYPAEESFIWLICKLVELRGFDWHAFDPAKPETFVDAM VNMLPLSAKFHRSPTHGIHHRSFPTYVFQAFPRKAGFVFTPDELVQSKKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23726; Mature: 23595
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRCSHDVALEQRCEKCTAEGLASLPKIAGEHAVRVTDVEIEYYPDHAAPRTESATFRHT CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCCCHHHHH KKVGHAAGLRCSISGQPAPEYHHLFCAWADSDGVDWATVRGIALGQIKEIPVLDPETDQP HHHHHHCCCEEEECCCCCCCCEEEEEEEECCCCCCHHHCCCEECCCCCCCCCCCCCCCCC TKELYPAEESFIWLICKLVELRGFDWHAFDPAKPETFVDAMVNMLPLSAKFHRSPTHGIH HHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHCCCCCCCCC HRSFPTYVFQAFPRKAGFVFTPDELVQSKKE CCCCHHHHHHHCCCCCCEEECHHHHHHCCCC >Mature Secondary Structure TRCSHDVALEQRCEKCTAEGLASLPKIAGEHAVRVTDVEIEYYPDHAAPRTESATFRHT CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCCCHHHHH KKVGHAAGLRCSISGQPAPEYHHLFCAWADSDGVDWATVRGIALGQIKEIPVLDPETDQP HHHHHHCCCEEEECCCCCCCCEEEEEEEECCCCCCHHHCCCEECCCCCCCCCCCCCCCCC TKELYPAEESFIWLICKLVELRGFDWHAFDPAKPETFVDAMVNMLPLSAKFHRSPTHGIH HHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHCCCCCCCCC HRSFPTYVFQAFPRKAGFVFTPDELVQSKKE CCCCHHHHHHHCCCCCCEEECHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA