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The map label for this gene is rodZ [H]

Identifier: 78066583

GI number: 78066583

Start: 2157308

End: 2158336

Strand: Reverse

Name: rodZ [H]

Synonym: Bcep18194_A5114

Alternate gene names: 78066583

Gene position: 2158336-2157308 (Counterclockwise)

Preceding gene: 78066584

Following gene: 78066582

Centisome position: 58.43

GC content: 69.1

Gene sequence:

>1029_bases
ATGAGTGAGCCGCAGCCGTCTAACGGCGCAGAGACGAATGGCGCGAAGCCGGCACCGGCAGGGTTGGAATCGCTTGCGGC
AGTCGGCAGCCGACTGGCGCAGCTTCGGGAGACAAGGGGTTGGACCGTCGACGACGTGTCGGCGCGACTCAAGGTCGCAC
CGCAGAAGCTTCGGGCGCTCGAGGCCGGTGACATCAGCCATTTGCCCGGCGTGACGTTCGCGCTCGGCGTCGTGCGCAGC
TACGCGAAGATGCTCGGCGTTGATCCGGAACCGTTCGCGCAGGCGTTGCGCCGTGAGCGCGGGGTGCCGGAAGTCGACCT
GTCGATGCCCGCGTCGTCGGGGACGGATCTGCCGCGCGGCCGCGTGTCGATTCCGCTGGGCGGATCGTCGCGCCATCACC
CGTGGCTGTGGGGCACGGGGATCGTCGTCGTCGCGGTGGTTGCGGTACTGATGTGGCACACTGGCGGCGATTCGTCGAGC
CTGCTCGCGCGCTTCAAGAGCGGCGACGCGGAGCATGCGTCGGCCGCGAGCGTGCCGGCGGCAGCATCGTCGTCATCCGT
CGAAGAGGCGGCTTCGGGTGGTGCGTCTGCCGTGGTCGCGAATGAGGTTCCGGCCCCGGCTGTTGCGTCTGCAGCGCCGG
CGCCGGCAGTTGCATCGGCTGTTCGGGCGCCTGCGCCCGTGGCGCCGGTCGTGACGGCGGCGGCTTCGCAGCCCGTCGTG
GCAACGACGGCGGCCAGCGCCGCCGCACCGGCACAGCCGGCGAGCGTCGTGGTCGCGGCCGGCCAGTCGATGGTGGAACT
GAAGGTCAAGCAGGACAGCTGGTTCAGCGTGCGCGACAAGAACGGCAAGGAGCTGTTCTCCGGGCTGGTGCACAGCAGCG
AGGCGAAGCAGGTCGCTGGCGAAGGCCCGTTCAAGGTCACGATCGGCAACAAGGCGGGCCTCGACGCGATCGCGTTCGAC
GGAAAACCTGTCGATCCGGCAAAATATTCGGCAGCGCGGGGTAATGTGGCGCGGTTCACGTTGCCCTGA

Upstream 100 bases:

>100_bases
CGGCGCCTCGGCGTCGCGCATGGTATGGACAGTTGCGGGTGCCGGCCGGCGGGAACCGGCGGCGGCCCGCCAGTGAAGAA
GAATCGACGCGAGGACAAGG

Downstream 100 bases:

>100_bases
CGTCAAGCGCCGTGGCGAAGGCCTGTCGTCGATATCGACAGGCCGTGAGGACACGGCGCTTTTTCAATTCATGCGCCGCG
TCGCGGCGCATTCCGCGTAA

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MSEPQPSNGAETNGAKPAPAGLESLAAVGSRLAQLRETRGWTVDDVSARLKVAPQKLRALEAGDISHLPGVTFALGVVRS
YAKMLGVDPEPFAQALRRERGVPEVDLSMPASSGTDLPRGRVSIPLGGSSRHHPWLWGTGIVVVAVVAVLMWHTGGDSSS
LLARFKSGDAEHASAASVPAAASSSSVEEAASGGASAVVANEVPAPAVASAAPAPAVASAVRAPAPVAPVVTAAASQPVV
ATTAASAAAPAQPASVVVAAGQSMVELKVKQDSWFSVRDKNGKELFSGLVHSSEAKQVAGEGPFKVTIGNKAGLDAIAFD
GKPVDPAKYSAARGNVARFTLP

Sequences:

>Translated_342_residues
MSEPQPSNGAETNGAKPAPAGLESLAAVGSRLAQLRETRGWTVDDVSARLKVAPQKLRALEAGDISHLPGVTFALGVVRS
YAKMLGVDPEPFAQALRRERGVPEVDLSMPASSGTDLPRGRVSIPLGGSSRHHPWLWGTGIVVVAVVAVLMWHTGGDSSS
LLARFKSGDAEHASAASVPAAASSSSVEEAASGGASAVVANEVPAPAVASAAPAPAVASAVRAPAPVAPVVTAAASQPVV
ATTAASAAAPAQPASVVVAAGQSMVELKVKQDSWFSVRDKNGKELFSGLVHSSEAKQVAGEGPFKVTIGNKAGLDAIAFD
GKPVDPAKYSAARGNVARFTLP
>Mature_341_residues
SEPQPSNGAETNGAKPAPAGLESLAAVGSRLAQLRETRGWTVDDVSARLKVAPQKLRALEAGDISHLPGVTFALGVVRSY
AKMLGVDPEPFAQALRRERGVPEVDLSMPASSGTDLPRGRVSIPLGGSSRHHPWLWGTGIVVVAVVAVLMWHTGGDSSSL
LARFKSGDAEHASAASVPAAASSSSVEEAASGGASAVVANEVPAPAVASAAPAPAVASAVRAPAPVAPVVTAAASQPVVA
TTAASAAAPAQPASVVVAAGQSMVELKVKQDSWFSVRDKNGKELFSGLVHSSEAKQVAGEGPFKVTIGNKAGLDAIAFDG
KPVDPAKYSAARGNVARFTLP

Specific function: Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis [H]

COG id: COG1426

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein. Note=Forms helical filaments along the long axis of the cell (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788864, Length=335, Percent_Identity=27.1641791044776, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 34500; Mature: 34369

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPQPSNGAETNGAKPAPAGLESLAAVGSRLAQLRETRGWTVDDVSARLKVAPQKLRAL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHH
EAGDISHLPGVTFALGVVRSYAKMLGVDPEPFAQALRRERGVPEVDLSMPASSGTDLPRG
HCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCC
RVSIPLGGSSRHHPWLWGTGIVVVAVVAVLMWHTGGDSSSLLARFKSGDAEHASAASVPA
EEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHCCCCC
AASSSSVEEAASGGASAVVANEVPAPAVASAAPAPAVASAVRAPAPVAPVVTAAASQPVV
CCCCHHHHHHHCCCCCEEEECCCCCCHHHCCCCCHHHHHHHCCCCCCHHHHHHCCCCCEE
ATTAASAAAPAQPASVVVAAGQSMVELKVKQDSWFSVRDKNGKELFSGLVHSSEAKQVAG
EECCCCCCCCCCCCEEEEECCCCEEEEEECCCCCEEECCCCHHHHHHHHHHCHHHHHHCC
EGPFKVTIGNKAGLDAIAFDGKPVDPAKYSAARGNVARFTLP
CCCEEEEECCCCCCCEEEECCCCCCCHHHHHCCCCEEEEECC
>Mature Secondary Structure 
SEPQPSNGAETNGAKPAPAGLESLAAVGSRLAQLRETRGWTVDDVSARLKVAPQKLRAL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHH
EAGDISHLPGVTFALGVVRSYAKMLGVDPEPFAQALRRERGVPEVDLSMPASSGTDLPRG
HCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCC
RVSIPLGGSSRHHPWLWGTGIVVVAVVAVLMWHTGGDSSSLLARFKSGDAEHASAASVPA
EEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHCCCCC
AASSSSVEEAASGGASAVVANEVPAPAVASAAPAPAVASAVRAPAPVAPVVTAAASQPVV
CCCCHHHHHHHCCCCCEEEECCCCCCHHHCCCCCHHHHHHHCCCCCCHHHHHHCCCCCEE
ATTAASAAAPAQPASVVVAAGQSMVELKVKQDSWFSVRDKNGKELFSGLVHSSEAKQVAG
EECCCCCCCCCCCCEEEEECCCCEEEEEECCCCCEEECCCCHHHHHHHHHHCHHHHHHCC
EGPFKVTIGNKAGLDAIAFDGKPVDPAKYSAARGNVARFTLP
CCCEEEEECCCCCCCEEEECCCCCCCHHHHHCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA