| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is ywjB [H]
Identifier: 78066555
GI number: 78066555
Start: 2124142
End: 2124675
Strand: Reverse
Name: ywjB [H]
Synonym: Bcep18194_A5086
Alternate gene names: 78066555
Gene position: 2124675-2124142 (Counterclockwise)
Preceding gene: 78066556
Following gene: 78066551
Centisome position: 57.51
GC content: 60.49
Gene sequence:
>534_bases ATGCGCCCTCAAGTCAGCGTATTTCTCGCTCTCAGTCTCGATGGATTCATCGCCGGTGAAAGCGGCGATTTGTCATGGCT GGAGGCATTTTCGTCGGATCCGCCGGATGAAACCGGCTATACGTCGCTGATGAACGACATCGACGTGATCGTGATGGGGC GCAACACATACGATACGGTGATTGCGTTCGACCCGTGGCCCTATGCCGGCAAACGGATGGTGGTCATGACTCATCGGAAA CTGGCTTCGCGCCATGGCGAAGAACCGTTCGACGGGGCGCTCACGACACTGCTTGGCCGGCTGGCAGAGGACGGCCATCG TCACGTCTACCTGGACGGTGGCATGACGGCGCGAGAAGGTATCGCGGCCGGCGTCGTCGACAGCATCACGCTCAACTGGG TGCCGATCCTGCTCGGGAAGGGGATTCCGTTGTTCAGCAATGGCCTGCCGCAAACGCTGCTGCGGCTCGATGATACGAAG CGATTGCCCAGCGGGTTGATGCAGGCCCGGTATGTGCCGGCCAGCCTGGATTGA
Upstream 100 bases:
>100_bases GAATGCCACAGCCTCAAACGAGGACGTCCTGTCGGCGTAGCGGCGCGTGTGGCGATTGTGGCTATACTCGTCATCCTTAC ATTTCCGAAAGGAATCCTGT
Downstream 100 bases:
>100_bases CGCGGGTTGTGATGCTGAATGCAGCGCAGGGAATGCGCTGCATGGTCATCGATTCAGGCCGGCGTCACGCGTCTCGTCGT CGGTCAGTGCGTCTGATCGA
Product: bifunctional deaminase-reductase-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MRPQVSVFLALSLDGFIAGESGDLSWLEAFSSDPPDETGYTSLMNDIDVIVMGRNTYDTVIAFDPWPYAGKRMVVMTHRK LASRHGEEPFDGALTTLLGRLAEDGHRHVYLDGGMTAREGIAAGVVDSITLNWVPILLGKGIPLFSNGLPQTLLRLDDTK RLPSGLMQARYVPASLD
Sequences:
>Translated_177_residues MRPQVSVFLALSLDGFIAGESGDLSWLEAFSSDPPDETGYTSLMNDIDVIVMGRNTYDTVIAFDPWPYAGKRMVVMTHRK LASRHGEEPFDGALTTLLGRLAEDGHRHVYLDGGMTAREGIAAGVVDSITLNWVPILLGKGIPLFSNGLPQTLLRLDDTK RLPSGLMQARYVPASLD >Mature_177_residues MRPQVSVFLALSLDGFIAGESGDLSWLEAFSSDPPDETGYTSLMNDIDVIVMGRNTYDTVIAFDPWPYAGKRMVVMTHRK LASRHGEEPFDGALTTLLGRLAEDGHRHVYLDGGMTAREGIAAGVVDSITLNWVPILLGKGIPLFSNGLPQTLLRLDDTK RLPSGLMQARYVPASLD
Specific function: Unknown
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis yyaP [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002734 [H]
Pfam domain/function: PF01872 RibD_C [H]
EC number: NA
Molecular weight: Translated: 19318; Mature: 19318
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPQVSVFLALSLDGFIAGESGDLSWLEAFSSDPPDETGYTSLMNDIDVIVMGRNTYDTV CCCCEEEEEEEEECCEEECCCCCHHHHHHHCCCCCCCCCHHHHHCCCEEEEECCCCCCEE IAFDPWPYAGKRMVVMTHRKLASRHGEEPFDGALTTLLGRLAEDGHRHVYLDGGMTAREG EEECCCCCCCCEEEEEEHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHH IAAGVVDSITLNWVPILLGKGIPLFSNGLPQTLLRLDDTKRLPSGLMQARYVPASLD HHHHHHHHHHHHHEEHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRPQVSVFLALSLDGFIAGESGDLSWLEAFSSDPPDETGYTSLMNDIDVIVMGRNTYDTV CCCCEEEEEEEEECCEEECCCCCHHHHHHHCCCCCCCCCHHHHHCCCEEEEECCCCCCEE IAFDPWPYAGKRMVVMTHRKLASRHGEEPFDGALTTLLGRLAEDGHRHVYLDGGMTAREG EEECCCCCCCCEEEEEEHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHH IAAGVVDSITLNWVPILLGKGIPLFSNGLPQTLLRLDDTKRLPSGLMQARYVPASLD HHHHHHHHHHHHHEEHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]