| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78065726
Identifier: 78065726
GI number: 78065726
Start: 1188437
End: 1189630
Strand: Reverse
Name: 78065726
Synonym: Bcep18194_A4254
Alternate gene names: NA
Gene position: 1189630-1188437 (Counterclockwise)
Preceding gene: 78065730
Following gene: 78065725
Centisome position: 32.2
GC content: 71.36
Gene sequence:
>1194_bases ATGCCCCGCACCACCGCTGCCCCCCCGCCCGCCGCGCCGCTCGCGCCGGGCGAACCGATCGCCTGCGACCTCTTCTGCAC CGTCGTCGACAATTTCGGCGACATCGGCGTCTGCTGGCGCGTCGCGCGCCAGCTCGCGCACGAGCACGGCTGGCAGGTTC GCCTGTTCGTCGACGACCTGCGCACGTTCGCGCGCCTGCTGCCCGGGGTCGATCCCGACGCGGGGCGGCAAACGGTCGAC GCGATCGTGATCGAGCACTGGCACGCGGAAGCCGGCGACGCGCTGGAGATCGCCGATGTCGTGATCGAAGCGTTCGCATG CGAGCTGCCCGGCGCGTATCTCGCGGCGATGGCGCGCCGCGCGCGTCGCCCCGTGTGGATCAACCTCGAATACCTGAGCG CCGAAGACTGGGTCGCCGACTTCCATCTGCGGCCATCGCCGCATCCGCGCTACCCGCTGCTGAAGACGTTTTTCTTCCCC GGCCTGTCGGCCGGCACCGGCGGCGTCCTGAAAGAACGCGACCTCGATGCGCGCCGCACGGCCTTCGCAGCCGACGCGGC GGCGCGCGACACCTGGTGGCAGCGCGCGACCGGCGGCGCGCCGCCGGCCGCCGGCACGACGGTCGTCAGCCTGTTCGCGT ACGAGAATCCGGCCGTCGACGCGCTGCTCGCGCAATGGCGCGACGGCCCGTCGCCGGTCGTCGCACTCGTGCCGGCCGGT CGCGTGTCGCCTGCCGTCGCGCGCTTTTTCGGGGTCGAGTCGTTCGGCGCGGGCACGCATGCGCGCAGCGGCAACCTGAC TGCCCACGGGCTCGCGTTCGTTCCCCAGGCCGACTACGATCCCTTGCTGTGGGTGGCCGACCTCAATTTCGTGCGCGGCG AAGATTCGTTCGTGCGAGCGCAGTGGGCCCGCAAGCCGTTCGTGTGGCACATCTACCCGCAGGCCGACGACGTGCACCTG CCGAAGCTCGACGCCGCGCTCGCGCACCTGTCGGCCGGCCTCGCCGATGCCCCGCGCGCGGCACTCGAGCGGTTCTGGCA CGCATGGAACGGCGTCGGCACGCCCGACTGGGCCGATTTCTGGCAGCACCGCGTCGCACTGGACGCCAACGCGGCCCGCT GGGCCGACGCGCTCGCGTCCGTCGGCGATCTCGCCGGAAAGCTGGCGGAATACGCAAAATCTCAGTTAAAATAA
Upstream 100 bases:
>100_bases ATCGGAAGCTTCAGGGGATGTCATGCGTGATCCGGGCGCCTTGTAACGCGGAACGGGTCTATTAGAATCGCCAGTTTAGA GCATTCACCGGCCCGCTTCG
Downstream 100 bases:
>100_bases GCGGTTATCCGACGGCTGACCAGGCAAGCGCTCGCTTTTGGCGTCCACCGGAACGCACCGCTTGCGCCGTCAGCCGTTGC GCAACGCTCAGGCACCTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MPRTTAAPPPAAPLAPGEPIACDLFCTVVDNFGDIGVCWRVARQLAHEHGWQVRLFVDDLRTFARLLPGVDPDAGRQTVD AIVIEHWHAEAGDALEIADVVIEAFACELPGAYLAAMARRARRPVWINLEYLSAEDWVADFHLRPSPHPRYPLLKTFFFP GLSAGTGGVLKERDLDARRTAFAADAAARDTWWQRATGGAPPAAGTTVVSLFAYENPAVDALLAQWRDGPSPVVALVPAG RVSPAVARFFGVESFGAGTHARSGNLTAHGLAFVPQADYDPLLWVADLNFVRGEDSFVRAQWARKPFVWHIYPQADDVHL PKLDAALAHLSAGLADAPRAALERFWHAWNGVGTPDWADFWQHRVALDANAARWADALASVGDLAGKLAEYAKSQLK
Sequences:
>Translated_397_residues MPRTTAAPPPAAPLAPGEPIACDLFCTVVDNFGDIGVCWRVARQLAHEHGWQVRLFVDDLRTFARLLPGVDPDAGRQTVD AIVIEHWHAEAGDALEIADVVIEAFACELPGAYLAAMARRARRPVWINLEYLSAEDWVADFHLRPSPHPRYPLLKTFFFP GLSAGTGGVLKERDLDARRTAFAADAAARDTWWQRATGGAPPAAGTTVVSLFAYENPAVDALLAQWRDGPSPVVALVPAG RVSPAVARFFGVESFGAGTHARSGNLTAHGLAFVPQADYDPLLWVADLNFVRGEDSFVRAQWARKPFVWHIYPQADDVHL PKLDAALAHLSAGLADAPRAALERFWHAWNGVGTPDWADFWQHRVALDANAARWADALASVGDLAGKLAEYAKSQLK >Mature_396_residues PRTTAAPPPAAPLAPGEPIACDLFCTVVDNFGDIGVCWRVARQLAHEHGWQVRLFVDDLRTFARLLPGVDPDAGRQTVDA IVIEHWHAEAGDALEIADVVIEAFACELPGAYLAAMARRARRPVWINLEYLSAEDWVADFHLRPSPHPRYPLLKTFFFPG LSAGTGGVLKERDLDARRTAFAADAAARDTWWQRATGGAPPAAGTTVVSLFAYENPAVDALLAQWRDGPSPVVALVPAGR VSPAVARFFGVESFGAGTHARSGNLTAHGLAFVPQADYDPLLWVADLNFVRGEDSFVRAQWARKPFVWHIYPQADDVHLP KLDAALAHLSAGLADAPRAALERFWHAWNGVGTPDWADFWQHRVALDANAARWADALASVGDLAGKLAEYAKSQLK
Specific function: Unknown
COG id: COG4394
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43191; Mature: 43060
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: PS50835 IG_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRTTAAPPPAAPLAPGEPIACDLFCTVVDNFGDIGVCWRVARQLAHEHGWQVRLFVDDL CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEHHHH RTFARLLPGVDPDAGRQTVDAIVIEHWHAEAGDALEIADVVIEAFACELPGAYLAAMARR HHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH ARRPVWINLEYLSAEDWVADFHLRPSPHPRYPLLKTFFFPGLSAGTGGVLKERDLDARRT HCCCEEEEEEEECCCCHHEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHH AFAADAAARDTWWQRATGGAPPAAGTTVVSLFAYENPAVDALLAQWRDGPSPVVALVPAG HHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCC RVSPAVARFFGVESFGAGTHARSGNLTAHGLAFVPQADYDPLLWVADLNFVRGEDSFVRA CCCHHHHHHHCCHHCCCCCCCCCCCCEECCEEECCCCCCCCEEEEECCCEECCCCHHHHH QWARKPFVWHIYPQADDVHLPKLDAALAHLSAGLADAPRAALERFWHAWNGVGTPDWADF HHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHH WQHRVALDANAARWADALASVGDLAGKLAEYAKSQLK HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PRTTAAPPPAAPLAPGEPIACDLFCTVVDNFGDIGVCWRVARQLAHEHGWQVRLFVDDL CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEHHHH RTFARLLPGVDPDAGRQTVDAIVIEHWHAEAGDALEIADVVIEAFACELPGAYLAAMARR HHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH ARRPVWINLEYLSAEDWVADFHLRPSPHPRYPLLKTFFFPGLSAGTGGVLKERDLDARRT HCCCEEEEEEEECCCCHHEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHH AFAADAAARDTWWQRATGGAPPAAGTTVVSLFAYENPAVDALLAQWRDGPSPVVALVPAG HHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCC RVSPAVARFFGVESFGAGTHARSGNLTAHGLAFVPQADYDPLLWVADLNFVRGEDSFVRA CCCHHHHHHHCCHHCCCCCCCCCCCCEECCEEECCCCCCCCEEEEECCCEECCCCHHHHH QWARKPFVWHIYPQADDVHLPKLDAALAHLSAGLADAPRAALERFWHAWNGVGTPDWADF HHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHH WQHRVALDANAARWADALASVGDLAGKLAEYAKSQLK HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA