| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is yncA [H]
Identifier: 78065730
GI number: 78065730
Start: 1193792
End: 1194340
Strand: Reverse
Name: yncA [H]
Synonym: Bcep18194_A4258
Alternate gene names: 78065730
Gene position: 1194340-1193792 (Counterclockwise)
Preceding gene: 78065731
Following gene: 78065726
Centisome position: 32.33
GC content: 66.85
Gene sequence:
>549_bases ATGAATTCCCCGAAACAGCGCGACGACGTGCGCCTGATCGATTGCAGCGAGGCCGAGCATGCGCCGGCCATTCTCGAGAT CCTGAACGACGCGATCGCGACGTCGACCGCGCTGTACGACTACAAGCCGCGTCCGCCGGAAGCGATGGTCGCGTGGTTCG CGGCGAAGCGCGCGGGCGGGTTCCCGGTCATCGGCGCCGTCGACGCATCGGGCACGCTGCTCGGCTTTGCGAGCTGGGGC ACGTTCCGCGCGTTTCCCGCCTACAAGTACACGGTCGAACACAGCGTGTACGTGCATCGCGACCAGCGCGGCCGCGGGCT TGGCGAGGTGCTGCTGCGCGAAGTGGTCCGGCGCGCGCACGAAGCGCAGGTGCACGTGGTGGTCGGCTGCATCGATGCGA CCAATGCGGGAAGCATCGCACTGCATACGAAGCTCGGATTCGTGCACTCGGGCACGATCACGCAGGCGGGATTCAAGTTC GGCCGGTGGCTCGACGCGGCGTTCTATCAGTTGACGCTCGACACGCCGGCGCAGCCGGTGGATGGTTGA
Upstream 100 bases:
>100_bases GCGATCTGCGATGCGTCCGCCGCCGGCGTGCGGAATCTCTGATGAACGCGTCGTCGCAGCAGCCGTGCGCGCGCCCTACT TACTGCCCACAGGAGCCCGT
Downstream 100 bases:
>100_bases GCGGATGCCGCGACGAACGAGCGACATCGCATAGCCGGTGCGCCCGTTCGCGAATCGCGCTTCAATCGCTGAAAACAAAA GCCCGCACGCAGCGGGCTTT
Product: GCN5-related N-acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MNSPKQRDDVRLIDCSEAEHAPAILEILNDAIATSTALYDYKPRPPEAMVAWFAAKRAGGFPVIGAVDASGTLLGFASWG TFRAFPAYKYTVEHSVYVHRDQRGRGLGEVLLREVVRRAHEAQVHVVVGCIDATNAGSIALHTKLGFVHSGTITQAGFKF GRWLDAAFYQLTLDTPAQPVDG
Sequences:
>Translated_182_residues MNSPKQRDDVRLIDCSEAEHAPAILEILNDAIATSTALYDYKPRPPEAMVAWFAAKRAGGFPVIGAVDASGTLLGFASWG TFRAFPAYKYTVEHSVYVHRDQRGRGLGEVLLREVVRRAHEAQVHVVVGCIDATNAGSIALHTKLGFVHSGTITQAGFKF GRWLDAAFYQLTLDTPAQPVDG >Mature_182_residues MNSPKQRDDVRLIDCSEAEHAPAILEILNDAIATSTALYDYKPRPPEAMVAWFAAKRAGGFPVIGAVDASGTLLGFASWG TFRAFPAYKYTVEHSVYVHRDQRGRGLGEVLLREVVRRAHEAQVHVVVGCIDATNAGSIALHTKLGFVHSGTITQAGFKF GRWLDAAFYQLTLDTPAQPVDG
Specific function: Unknown
COG id: COG1247
COG function: function code M; Sortase and related acyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1787719, Length=169, Percent_Identity=40.2366863905325, Blast_Score=135, Evalue=2e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: 2.3.1.-
Molecular weight: Translated: 19811; Mature: 19811
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSPKQRDDVRLIDCSEAEHAPAILEILNDAIATSTALYDYKPRPPEAMVAWFAAKRAGG CCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCC FPVIGAVDASGTLLGFASWGTFRAFPAYKYTVEHSVYVHRDQRGRGLGEVLLREVVRRAH CCEEEEECCCCEEEEEECCCCEECCCCEEEEEECEEEEEECCCCCCHHHHHHHHHHHHHH EAQVHVVVGCIDATNAGSIALHTKLGFVHSGTITQAGFKFGRWLDAAFYQLTLDTPAQPV CCEEEEEEEEEECCCCCCEEEEEEECEEECCCEEHHHHHHHHHHHEEEEEEEECCCCCCC DG CC >Mature Secondary Structure MNSPKQRDDVRLIDCSEAEHAPAILEILNDAIATSTALYDYKPRPPEAMVAWFAAKRAGG CCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCC FPVIGAVDASGTLLGFASWGTFRAFPAYKYTVEHSVYVHRDQRGRGLGEVLLREVVRRAH CCEEEEECCCCEEEEEECCCCEECCCCEEEEEECEEEEEECCCCCCHHHHHHHHHHHHHH EAQVHVVVGCIDATNAGSIALHTKLGFVHSGTITQAGFKFGRWLDAAFYQLTLDTPAQPV CCEEEEEEEEEECCCCCCEEEEEEECEEECCCEEHHHHHHHHHHHEEEEEEEECCCCCCC DG CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]