| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
Click here to switch to the map view.
The map label for this gene is 78065687
Identifier: 78065687
GI number: 78065687
Start: 1149339
End: 1150769
Strand: Direct
Name: 78065687
Synonym: Bcep18194_A4215
Alternate gene names: NA
Gene position: 1149339-1150769 (Clockwise)
Preceding gene: 78065686
Following gene: 78065688
Centisome position: 31.11
GC content: 65.62
Gene sequence:
>1431_bases ATGAAACGACATGCCGCCTGGGCGGGCATGGCGTCGGGGATCGCGCTTGGCGCCGTTCCCGCGCTTGCATCGGCCGCAAC GCTCGACGGTGCCACGCTGTCTGCACTCTGGGGTATCCCGTTCGCCGGGATCCTGCTGTCCATCGCACTGTTCCCGCTCG TCGCCCCCGTGTTCTGGCATCACCACTTCGGCAAGATTGCGGCCGGGTGGGCGGCCCTGTTCCTGATCCCGTTCGCGTTC GCGTTCGGCGCGGGCACCGCGTTCGGCACGCTCGTGCATGCACTGCTCGAGGAATACATCCCCTTCATCGTGCTGCTCAC CGCGCTCTATACGGTCGCGGGCGGCATCTGCGTGAACGGCAACCTGCACGGCACGCCGAAGCTGAACACCGCGATCCTCG CGCTCGGCACGCTGCTCGCGAGCGTGATGGGCACGACGGGCGCTGCGATGCTGCTGATCCGGCCGCTGCTGCGCGCCAAC GACAACCGCAAGCATGTCGTGCACGTCGTGATCTTCTTCATCTTCCTCGTCGCGAACGCGGGCGGCTCGCTGTCGCCGCT CGGCGATCCGCCGCTGTTCCTCGGTTTCCTGAATGGCGTGAGCTTCTTCTGGACGACCACGCATCTTGCACTGCCGATGC TGTTCATCTGCGTCGTGCTGCTGACGCTGTTCTTCATGCTCGATACGTACTTCTACCGGAAGGGCGGCGAGGAGCGGCCG GCCGTGCTCGACCCGACGCCCGACAACGACAGGCTGTCGATCGACGGCAAGATCAATTTCGTGCTGCTCGTAGCCGTGAT CGGCCTGGTGCTGATGAGCGGCGTATGGAAGCCGGGCATCACGTTCGACGTGTGGGGCACGCACGTCGCGCTGCAGAACC TCGTACGCGACGTCGCGCTCGTGGGCGTCACGCTCGCGTCGCTCGCGCTGACGCCGCGCTCCGCGCGCGAGGGCAACGCG TTCAACTGGGCGCCGATCGAGGAAGTCGCGAAGCTGTTCGCGGGGATCTTCGTGACGATCGCACCGGTGATCGTGATCCT GCGCGCCGGTGCCGACGGCGCATTCGCGCAGATCGTCCATCTCGTCACGGGGCCGGACGGCAAGCCGATCGACGCGATGT ACTTCTGGGCGACGGGCATCCTGTCGTCGTTCCTCGACAACGCGCCGACCTATCTCGTGTTCTTCAACCTCGCGGGTGGC GATGCGCAGTCGCTGATGACGACCGGCGCGTCGACGCTCGCCGCGATTTCCGCGGGCGCGGTGTTCATGGGCGCGAACAG CTATATCGGCAACGCGCCGAACTTCATGGTGAAGGCGATCGCCGAATCGCGCGGCGTGAAGATGCCGAGCTTCTTCGCGT ATCTCGGCTGGGCGCTGGTCGTGCTGATACCGGTATTCCTGCTGACGTCGTGGATCTTCTTCACGGCGTAA
Upstream 100 bases:
>100_bases GTACTGGGCGCGCACGGCCCGTACCGCGTACACGTGATCGTCGTACGGGGCGCATGACGCGCCCGCTGCATCCACTACCA CTCGAACAAGGAAGTTCTGC
Downstream 100 bases:
>100_bases GCTGACGATTTTCAACCTAGAGCGGGCGGTCCCGGCGGCGCATGGCGTGCTGCGATCCGTCCGCGGCATGCGGAGATGGC GATGCAGAAGATCCTGGTCG
Product: Na+/H+ antiporter NhaD and related arsenite permeases-like
Products: NA
Alternate protein names: Transmembrane Protein; Arsenite-Anitmonite Efflux Pump ArsB Family; Na+ Antiporter; Na+/H+ Antiporter; Transporter Uit6 Family; Arsenite Transport Protein ArsB; NA+/H+ Antiporter Permease; Na+/H+ Antiporter NhaD-Like Permease; Na+/H+ Antiporter NhaD And Related Arsenite Permeases-Like; Na+/H+ Antiporter NhaD Or Related Arsenite Permease; Signal Peptide; ArsB Family Arsenate Permease; Na+/H+ Antiporter NhaD And Related Arsenite Permeases; Na+/H+ Antiporter NhaD
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
>476_residues MKRHAAWAGMASGIALGAVPALASAATLDGATLSALWGIPFAGILLSIALFPLVAPVFWHHHFGKIAAGWAALFLIPFAF AFGAGTAFGTLVHALLEEYIPFIVLLTALYTVAGGICVNGNLHGTPKLNTAILALGTLLASVMGTTGAAMLLIRPLLRAN DNRKHVVHVVIFFIFLVANAGGSLSPLGDPPLFLGFLNGVSFFWTTTHLALPMLFICVVLLTLFFMLDTYFYRKGGEERP AVLDPTPDNDRLSIDGKINFVLLVAVIGLVLMSGVWKPGITFDVWGTHVALQNLVRDVALVGVTLASLALTPRSAREGNA FNWAPIEEVAKLFAGIFVTIAPVIVILRAGADGAFAQIVHLVTGPDGKPIDAMYFWATGILSSFLDNAPTYLVFFNLAGG DAQSLMTTGASTLAAISAGAVFMGANSYIGNAPNFMVKAIAESRGVKMPSFFAYLGWALVVLIPVFLLTSWIFFTA
Sequences:
>Translated_476_residues MKRHAAWAGMASGIALGAVPALASAATLDGATLSALWGIPFAGILLSIALFPLVAPVFWHHHFGKIAAGWAALFLIPFAF AFGAGTAFGTLVHALLEEYIPFIVLLTALYTVAGGICVNGNLHGTPKLNTAILALGTLLASVMGTTGAAMLLIRPLLRAN DNRKHVVHVVIFFIFLVANAGGSLSPLGDPPLFLGFLNGVSFFWTTTHLALPMLFICVVLLTLFFMLDTYFYRKGGEERP AVLDPTPDNDRLSIDGKINFVLLVAVIGLVLMSGVWKPGITFDVWGTHVALQNLVRDVALVGVTLASLALTPRSAREGNA FNWAPIEEVAKLFAGIFVTIAPVIVILRAGADGAFAQIVHLVTGPDGKPIDAMYFWATGILSSFLDNAPTYLVFFNLAGG DAQSLMTTGASTLAAISAGAVFMGANSYIGNAPNFMVKAIAESRGVKMPSFFAYLGWALVVLIPVFLLTSWIFFTA >Mature_476_residues MKRHAAWAGMASGIALGAVPALASAATLDGATLSALWGIPFAGILLSIALFPLVAPVFWHHHFGKIAAGWAALFLIPFAF AFGAGTAFGTLVHALLEEYIPFIVLLTALYTVAGGICVNGNLHGTPKLNTAILALGTLLASVMGTTGAAMLLIRPLLRAN DNRKHVVHVVIFFIFLVANAGGSLSPLGDPPLFLGFLNGVSFFWTTTHLALPMLFICVVLLTLFFMLDTYFYRKGGEERP AVLDPTPDNDRLSIDGKINFVLLVAVIGLVLMSGVWKPGITFDVWGTHVALQNLVRDVALVGVTLASLALTPRSAREGNA FNWAPIEEVAKLFAGIFVTIAPVIVILRAGADGAFAQIVHLVTGPDGKPIDAMYFWATGILSSFLDNAPTYLVFFNLAGG DAQSLMTTGASTLAAISAGAVFMGANSYIGNAPNFMVKAIAESRGVKMPSFFAYLGWALVVLIPVFLLTSWIFFTA
Specific function: Unknown
COG id: COG1055
COG function: function code P; Na+/H+ antiporter NhaD and related arsenite permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50410; Mature: 50410
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRHAAWAGMASGIALGAVPALASAATLDGATLSALWGIPFAGILLSIALFPLVAPVFWH CCCCHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH HHFGKIAAGWAALFLIPFAFAFGAGTAFGTLVHALLEEYIPFIVLLTALYTVAGGICVNG HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECC NLHGTPKLNTAILALGTLLASVMGTTGAAMLLIRPLLRANDNRKHVVHVVIFFIFLVANA CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC GGSLSPLGDPPLFLGFLNGVSFFWTTTHLALPMLFICVVLLTLFFMLDTYFYRKGGEERP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AVLDPTPDNDRLSIDGKINFVLLVAVIGLVLMSGVWKPGITFDVWGTHVALQNLVRDVAL CEECCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHH VGVTLASLALTPRSAREGNAFNWAPIEEVAKLFAGIFVTIAPVIVILRAGADGAFAQIVH HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LVTGPDGKPIDAMYFWATGILSSFLDNAPTYLVFFNLAGGDAQSLMTTGASTLAAISAGA HHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHCCHHHHHHHHCCC VFMGANSYIGNAPNFMVKAIAESRGVKMPSFFAYLGWALVVLIPVFLLTSWIFFTA CEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKRHAAWAGMASGIALGAVPALASAATLDGATLSALWGIPFAGILLSIALFPLVAPVFWH CCCCHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH HHFGKIAAGWAALFLIPFAFAFGAGTAFGTLVHALLEEYIPFIVLLTALYTVAGGICVNG HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECC NLHGTPKLNTAILALGTLLASVMGTTGAAMLLIRPLLRANDNRKHVVHVVIFFIFLVANA CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC GGSLSPLGDPPLFLGFLNGVSFFWTTTHLALPMLFICVVLLTLFFMLDTYFYRKGGEERP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AVLDPTPDNDRLSIDGKINFVLLVAVIGLVLMSGVWKPGITFDVWGTHVALQNLVRDVAL CEECCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHH VGVTLASLALTPRSAREGNAFNWAPIEEVAKLFAGIFVTIAPVIVILRAGADGAFAQIVH HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LVTGPDGKPIDAMYFWATGILSSFLDNAPTYLVFFNLAGGDAQSLMTTGASTLAAISAGA HHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHCCHHHHHHHHCCC VFMGANSYIGNAPNFMVKAIAESRGVKMPSFFAYLGWALVVLIPVFLLTSWIFFTA CEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA