| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
Click here to switch to the map view.
The map label for this gene is add [H]
Identifier: 78065603
GI number: 78065603
Start: 1061672
End: 1062697
Strand: Reverse
Name: add [H]
Synonym: Bcep18194_A4131
Alternate gene names: 78065603
Gene position: 1062697-1061672 (Counterclockwise)
Preceding gene: 78065604
Following gene: 78065602
Centisome position: 28.77
GC content: 64.91
Gene sequence:
>1026_bases ATGACCCCGACATTCAAGGACAAGATTGCCCGCGCGCCGAAAGCGGAGCTGCACATCCATATCGAAGGCTCGCTCGAGCC CGAACTGATTTTTGCGCTCGCACAGCGCAACGGCGTGAAGCTCGCGTACGACTCGATCGACGCGCTGCGCGCCGCGTACG CATTCACCGACCTGCAATCGTTCCTCGACATCTATTACGCCGGTGCGAGCGTGCTGCTGACCGAGCAGGATTTCTACGAC ATGACGGCCGCGTACTGCGAACGCGCACTCGCCGACAACGTCGTCCACACCGAGCTGTTCTTCGATCCGCAGACGCACAC CGAACGTGGCGTGCCGATCGACACGGTCGTCGCGGGCATCGAGCGTGCACTCGCCGATGCCGAACAACGCGGGCTGTCGA GCAAGCTGATCCTGTGCTTCCTGCGCCACCTGTCCGAAGAGGACGCGCTCGCGACGTTCGAATCCGCGCTGCCGCTGTTC GAACGCTATCGCCATCGCCTGATCGGCGTGGGCCTCGACTCGTCCGAGCTGGGCCATCCGCCGACGAAGTTCGCCCGCGT GTTCGAGAAGGCACGCGCGCTCGGGCTGAAGCTCGTCGCGCACGCGGGCGAGGAAGGCCCGCCCGCGTACATCTACGAAG CGCTCGACGTGCTGAAGGTCGACCGGATCGACCACGGCGTGCGCAGCATCGAGGACGCGGCACTCGTCGAGCGCCTCGCG AAAACGCGCACGGCGCTCACCGTGTGCCCGCTGTCGAACCTGAAGCTTTGCGTGTTCGACGACATGGCGAAGCACACGCT GAAGGCGCTGCTCGATCGCGGCGTCGCGGTGACGATCAACTCCGACGATCCGGCTTATTTCGGCGGCTACGTCAACGAAA ACTACTTCGCGACGGCCGAAGGGCTGCAACTCACGGATGCCGAAGTCCATGCGGTGATCCGCAACGGCTTCGAGGCGTCG TTCATCGAACCGGCGCAGCGCGACGCACTGTACGCGCGCCTCGACGCGTACTGGCAGGCCGCGTGA
Upstream 100 bases:
>100_bases CGCGATCTCGGTGGCGGCGCAATTGCTGCAGGCCGTCGAGGCAAACGCGAATGCGTCCGCACAGGCTTCCCCTACCTACT GACCGACCAAGAACGACGCC
Downstream 100 bases:
>100_bases CGGCCGGCATCGAGGAACGCTGACAGATGAAACACGGCAACGGCATCCGCTTCGCGACCACCGGCCCGGCCTTGCGCCGG GACGACCGCGCGCGTGAGCG
Product: adenosine deaminase
Products: NA
Alternate protein names: Adenosine aminohydrolase [H]
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MTPTFKDKIARAPKAELHIHIEGSLEPELIFALAQRNGVKLAYDSIDALRAAYAFTDLQSFLDIYYAGASVLLTEQDFYD MTAAYCERALADNVVHTELFFDPQTHTERGVPIDTVVAGIERALADAEQRGLSSKLILCFLRHLSEEDALATFESALPLF ERYRHRLIGVGLDSSELGHPPTKFARVFEKARALGLKLVAHAGEEGPPAYIYEALDVLKVDRIDHGVRSIEDAALVERLA KTRTALTVCPLSNLKLCVFDDMAKHTLKALLDRGVAVTINSDDPAYFGGYVNENYFATAEGLQLTDAEVHAVIRNGFEAS FIEPAQRDALYARLDAYWQAA
Sequences:
>Translated_341_residues MTPTFKDKIARAPKAELHIHIEGSLEPELIFALAQRNGVKLAYDSIDALRAAYAFTDLQSFLDIYYAGASVLLTEQDFYD MTAAYCERALADNVVHTELFFDPQTHTERGVPIDTVVAGIERALADAEQRGLSSKLILCFLRHLSEEDALATFESALPLF ERYRHRLIGVGLDSSELGHPPTKFARVFEKARALGLKLVAHAGEEGPPAYIYEALDVLKVDRIDHGVRSIEDAALVERLA KTRTALTVCPLSNLKLCVFDDMAKHTLKALLDRGVAVTINSDDPAYFGGYVNENYFATAEGLQLTDAEVHAVIRNGFEAS FIEPAQRDALYARLDAYWQAA >Mature_340_residues TPTFKDKIARAPKAELHIHIEGSLEPELIFALAQRNGVKLAYDSIDALRAAYAFTDLQSFLDIYYAGASVLLTEQDFYDM TAAYCERALADNVVHTELFFDPQTHTERGVPIDTVVAGIERALADAEQRGLSSKLILCFLRHLSEEDALATFESALPLFE RYRHRLIGVGLDSSELGHPPTKFARVFEKARALGLKLVAHAGEEGPPAYIYEALDVLKVDRIDHGVRSIEDAALVERLAK TRTALTVCPLSNLKLCVFDDMAKHTLKALLDRGVAVTINSDDPAYFGGYVNENYFATAEGLQLTDAEVHAVIRNGFEASF IEPAQRDALYARLDAYWQAA
Specific function: Unknown
COG id: COG1816
COG function: function code F; Adenosine deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosine and AMP deaminases family [H]
Homologues:
Organism=Homo sapiens, GI47078295, Length=371, Percent_Identity=25.0673854447439, Blast_Score=111, Evalue=1e-24, Organism=Escherichia coli, GI1787910, Length=334, Percent_Identity=28.4431137724551, Blast_Score=130, Evalue=2e-31, Organism=Caenorhabditis elegans, GI32565969, Length=344, Percent_Identity=21.5116279069767, Blast_Score=65, Evalue=7e-11, Organism=Caenorhabditis elegans, GI17538512, Length=344, Percent_Identity=21.5116279069767, Blast_Score=64, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6324188, Length=331, Percent_Identity=43.8066465256798, Blast_Score=281, Evalue=9e-77,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001365 - InterPro: IPR006330 [H]
Pfam domain/function: PF00962 A_deaminase [H]
EC number: =3.5.4.4 [H]
Molecular weight: Translated: 37766; Mature: 37635
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPTFKDKIARAPKAELHIHIEGSLEPELIFALAQRNGVKLAYDSIDALRAAYAFTDLQS CCCCHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHH FLDIYYAGASVLLTEQDFYDMTAAYCERALADNVVHTELFFDPQTHTERGVPIDTVVAGI HHHHHHCCCEEEEECCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHH ERALADAEQRGLSSKLILCFLRHLSEEDALATFESALPLFERYRHRLIGVGLDSSELGHP HHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCC PTKFARVFEKARALGLKLVAHAGEEGPPAYIYEALDVLKVDRIDHGVRSIEDAALVERLA HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KTRTALTVCPLSNLKLCVFDDMAKHTLKALLDRGVAVTINSDDPAYFGGYVNENYFATAE HHHHEEEEECCCCCEEEEEHHHHHHHHHHHHHCCEEEEECCCCCCEECCCCCCCEEEECC GLQLTDAEVHAVIRNGFEASFIEPAQRDALYARLDAYWQAA CCEECHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure TPTFKDKIARAPKAELHIHIEGSLEPELIFALAQRNGVKLAYDSIDALRAAYAFTDLQS CCCHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHH FLDIYYAGASVLLTEQDFYDMTAAYCERALADNVVHTELFFDPQTHTERGVPIDTVVAGI HHHHHHCCCEEEEECCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHH ERALADAEQRGLSSKLILCFLRHLSEEDALATFESALPLFERYRHRLIGVGLDSSELGHP HHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCC PTKFARVFEKARALGLKLVAHAGEEGPPAYIYEALDVLKVDRIDHGVRSIEDAALVERLA HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KTRTALTVCPLSNLKLCVFDDMAKHTLKALLDRGVAVTINSDDPAYFGGYVNENYFATAE HHHHEEEEECCCCCEEEEEHHHHHHHHHHHHHCCEEEEECCCCCCEECCCCCCCEEEECC GLQLTDAEVHAVIRNGFEASFIEPAQRDALYARLDAYWQAA CCEECHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA