| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is yqeB [C]
Identifier: 78065604
GI number: 78065604
Start: 1062716
End: 1063726
Strand: Reverse
Name: yqeB [C]
Synonym: Bcep18194_A4132
Alternate gene names: 78065604
Gene position: 1063726-1062716 (Counterclockwise)
Preceding gene: 78065605
Following gene: 78065603
Centisome position: 28.8
GC content: 69.54
Gene sequence:
>1011_bases ATGGAAGCCTGGCTCGGCGATCTGCAGCAACTGCTCGCGCATGGCGAAGCGGCCGTGCTCGTGACGGTCGCGCACACCGA TGGCTCCGCACCGCGCGAAGCCGGCACCAAGATGCTCGTCACGCGCGACATGGCCCGCCATACGATCGGCGGCGGTCATC TGGAATGGAAGGCGATCGAGATCGCGCGGCATCTGCTGAAGGATGGCGCGCACGTGCCGCACGCGCGCCGGCTCGAACGG CTCGCGCTCGGCCCGAGCCTCGGCCAGTGCTGCGGCGGCGCCGTGGTGCTCGCGTTCGAGCGGCTCGACGTCGGCGATCT CGGCTGGATCATGTCGCTCGCGAAGCGTGTCGCGGCCGGCGCCGCGACCGTGCGTAGCGTATCATTCGGCCCCTCGCCGG GCGCGCCGCTGTTGAGCGAGCCCGAATCGGAAGCCGCGCGTGCCGACTGCCTGCTGTGGGAAACCGGCGGCGTGTCGCTG ATGACCGAAACGATCGCGCCGTTTGCGTTCCCCGTCGTGCTGTTCGGCGCCGGGCACATCGGCACCGCGCTCGTGAAGGT GCTGGCGACGCTGCCGTGCCACGTGCGCTGGATCGACGGGCCCGATGCGGTGTTCCCGCCGGCCGACGCGCTCGCCGGCA TCGGCAACCTCGCGATCGAAGCGGCCGCTGCCCCGGCCGACGCGGTCGACGCCGCACCGCCGCAGTCCTACTTCGTCGTG ATGACGCACGACCACGCACTCGATTTCGTGCTGGCCGAGCGCATCCTGCGACGCGGCGACTATGCGTACTTCGGGATGAC CGGCTCGCACGCGAAACGCGTGCAGTTCGATCATCGCCTCGCAGCGATCGGCTTCGACCCGGCCCAGGTCGCGCGGATGC GCTGCCCGATCGGTGTCGAAGGCATCATCGACAAGGCACCTGAAGTGATCGCGATCTCGGTGGCGGCGCAATTGCTGCAG GCCGTCGAGGCAAACGCGAATGCGTCCGCACAGGCTTCCCCTACCTACTGA
Upstream 100 bases:
>100_bases CGTGCGGCCGGCCCGCTCCGCTCCCGTCCGTCATCGTTGCCGTCACGCTCGCCAGCCCGCGCCGCGTGCCGTGCCACGTC GTCCCGAACGGAGCGTGCTG
Downstream 100 bases:
>100_bases CCGACCAAGAACGACGCCATGACCCCGACATTCAAGGACAAGATTGCCCGCGCGCCGAAAGCGGAGCTGCACATCCATAT CGAAGGCTCGCTCGAGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Molybdenum Cofactor Sulfurylase; Xanthine And Co Dehydrogenase Maturation Factor; Xanthine Dehydrogenase Accessory Factor XdhC; Xanthine Dehydrogenase Protein; Xanthine Dehydrogenase Accessory Protein; Adenosine Deaminase; Xanthine Dehydrogenase Accessory Protein Xdhc; Xanthine Dehydrogenase Accessory Factor; Conserved Domain-Containing Protein; Xanthine Dehydrogenase Cofactor Insertion; XdhC Protein; Xanthine Dehydrogenase Xdh C Protein; Xanthine Dehydrogenase; Xanthine And CO Dehydrogenases Maturation Factor; XANTHINE DEHYDROGENASE Accessory Component; Xanthine Dehydrogenase XdhC; Xanthine Dehydrogenase Chaperone; Dehydrogenase; Chaperone XdhC; Xanthine Dehydrogenase Accessory Factor X; Xanthine Dehydrogenase Maturation Factor; Xanthine/CO Dehydrogenase Maturation Protein; Xanthine Dehydrogenase Protein C Subunit
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MEAWLGDLQQLLAHGEAAVLVTVAHTDGSAPREAGTKMLVTRDMARHTIGGGHLEWKAIEIARHLLKDGAHVPHARRLER LALGPSLGQCCGGAVVLAFERLDVGDLGWIMSLAKRVAAGAATVRSVSFGPSPGAPLLSEPESEAARADCLLWETGGVSL MTETIAPFAFPVVLFGAGHIGTALVKVLATLPCHVRWIDGPDAVFPPADALAGIGNLAIEAAAAPADAVDAAPPQSYFVV MTHDHALDFVLAERILRRGDYAYFGMTGSHAKRVQFDHRLAAIGFDPAQVARMRCPIGVEGIIDKAPEVIAISVAAQLLQ AVEANANASAQASPTY
Sequences:
>Translated_336_residues MEAWLGDLQQLLAHGEAAVLVTVAHTDGSAPREAGTKMLVTRDMARHTIGGGHLEWKAIEIARHLLKDGAHVPHARRLER LALGPSLGQCCGGAVVLAFERLDVGDLGWIMSLAKRVAAGAATVRSVSFGPSPGAPLLSEPESEAARADCLLWETGGVSL MTETIAPFAFPVVLFGAGHIGTALVKVLATLPCHVRWIDGPDAVFPPADALAGIGNLAIEAAAAPADAVDAAPPQSYFVV MTHDHALDFVLAERILRRGDYAYFGMTGSHAKRVQFDHRLAAIGFDPAQVARMRCPIGVEGIIDKAPEVIAISVAAQLLQ AVEANANASAQASPTY >Mature_336_residues MEAWLGDLQQLLAHGEAAVLVTVAHTDGSAPREAGTKMLVTRDMARHTIGGGHLEWKAIEIARHLLKDGAHVPHARRLER LALGPSLGQCCGGAVVLAFERLDVGDLGWIMSLAKRVAAGAATVRSVSFGPSPGAPLLSEPESEAARADCLLWETGGVSL MTETIAPFAFPVVLFGAGHIGTALVKVLATLPCHVRWIDGPDAVFPPADALAGIGNLAIEAAAAPADAVDAAPPQSYFVV MTHDHALDFVLAERILRRGDYAYFGMTGSHAKRVQFDHRLAAIGFDPAQVARMRCPIGVEGIIDKAPEVIAISVAAQLLQ AVEANANASAQASPTY
Specific function: Unknown
COG id: COG1975
COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35240; Mature: 35240
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAWLGDLQQLLAHGEAAVLVTVAHTDGSAPREAGTKMLVTRDMARHTIGGGHLEWKAIE CCHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHCCEEEEEHHHHHHCCCCCCEEHHHHH IARHLLKDGAHVPHARRLERLALGPSLGQCCGGAVVLAFERLDVGDLGWIMSLAKRVAAG HHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHH AATVRSVSFGPSPGAPLLSEPESEAARADCLLWETGGVSLMTETIAPFAFPVVLFGAGHI HHHHEEECCCCCCCCCCCCCCCHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHCCCHH GTALVKVLATLPCHVRWIDGPDAVFPPADALAGIGNLAIEAAAAPADAVDAAPPQSYFVV HHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHCHHHHHHHCCCCCCCCCCCCCCCEEEE MTHDHALDFVLAERILRRGDYAYFGMTGSHAKRVQFDHRLAAIGFDPAQVARMRCPIGVE EECCHHHHHHHHHHHHHCCCEEEEECCCCCCHHEECCCEEEEECCCHHHHHHHCCCCCHH GIIDKAPEVIAISVAAQLLQAVEANANASAQASPTY HHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MEAWLGDLQQLLAHGEAAVLVTVAHTDGSAPREAGTKMLVTRDMARHTIGGGHLEWKAIE CCHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHCCEEEEEHHHHHHCCCCCCEEHHHHH IARHLLKDGAHVPHARRLERLALGPSLGQCCGGAVVLAFERLDVGDLGWIMSLAKRVAAG HHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHH AATVRSVSFGPSPGAPLLSEPESEAARADCLLWETGGVSLMTETIAPFAFPVVLFGAGHI HHHHEEECCCCCCCCCCCCCCCHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHCCCHH GTALVKVLATLPCHVRWIDGPDAVFPPADALAGIGNLAIEAAAAPADAVDAAPPQSYFVV HHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHCHHHHHHHCCCCCCCCCCCCCCCEEEE MTHDHALDFVLAERILRRGDYAYFGMTGSHAKRVQFDHRLAAIGFDPAQVARMRCPIGVE EECCHHHHHHHHHHHHHCCCEEEEECCCCCCHHEECCCEEEEECCCHHHHHHHCCCCCHH GIIDKAPEVIAISVAAQLLQAVEANANASAQASPTY HHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA