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The map label for this gene is yggW [H]

Identifier: 78065575

GI number: 78065575

Start: 1032124

End: 1033338

Strand: Reverse

Name: yggW [H]

Synonym: Bcep18194_A4103

Alternate gene names: 78065575

Gene position: 1033338-1032124 (Counterclockwise)

Preceding gene: 78065576

Following gene: 78065570

Centisome position: 27.97

GC content: 66.26

Gene sequence:

>1215_bases
ATGAGCCAGGCCGCGGAAACCGGCGCGCGCGTTGTCGCGACCTTCACGTCGCCCGGCCAGGTGCGGCTCACGTCGCTGCC
GCCGCTCGCGCTGTACGTGCATTTCCCGTGGTGCGTGCGCAAGTGCCCGTACTGCGATTTCAACTCGCACGAGTGGAAGG
GCGAGCGGTTTCCGGAAACCGAGTATCTCGACGCGCTGCGCGCCGATCTCGAGCAGGCGCTGCCGCTCGTGTGGGGCCGG
CAGGTGCATACGATATTCATCGGCGGCGGCACGCCGAGCCTGCTGTCGGCGGCCGGTCTCGACCGGATGCTGTCCGACGT
GCGCGCGCTGCTGCCGCTCGACGCCGATGCGGAGATCACGCTCGAGGCCAATCCGGGCACGTTCGAGGCCGCGAAGTTCG
CGCAGTTCCGCGCGAGCGGCGTGAATCGCCTGTCGGTCGGCATCCAGAGCTTCAACGAGACGCACCTGAAGGCGCTCGGC
CGGATTCACGACACCACGCAGGCACGCGCCGCTGTCGAGATCGCCGCGAAGAACTTCGACAACTTCAACCTCGACCTGAT
GTTCGCGCTGCCGAACCAGACGCTCGACGAATGCCGCACCGACGTCGAAACCGCGCTGTCGTACGCGCCGCCGCATCTGT
CGCTGTATCACCTGACGCTCGAGCCGAATACGCTGTTCGCGAAGTTCCCGCCGGTCGTGCCCGACGACGACGCGTCGGCC
GACATGCAGGAATGGATTCACGCGCGCACGGCCGAGGCCGGTTACGGACACTACGAAGTCTCCGCGTATGCGAAGCCGAA
TCATCAGTGCAAGCACAACCTGAACTACTGGCGCTTCGGCGACTATCTCGGAATCGGTGCGGGCGCACACACGAAGCTGT
CGTTCCCGAACCGGATCCTGCGGCAGGCACGCTACAAGCATCCGGCAACCTTCATCGAGCAGGCGATGGCCGGCACGGCC
GTGCAGGAAGAGCGTGAAGTCGGCGCGCGCGACCTGCCGTTCGAGTTCATGCTGAACACGCTGCGGCTCGTCGAGGGCTT
CCCCGTGCACAACTTCGCCGAACGCACGGGCCTGCCGATGAGCACGATCGAGCCGGCGCTGCAGGAAGCGGAACGACGCG
GGCTGATCGCGCGCGATTTCGCGCAGATCGCGCCGACGCCGCTGGGCCAGCGTTTCCTCAACGACCTGCAGGAATTGTTC
CTGCGCGACGATTGA

Upstream 100 bases:

>100_bases
AACACGCACAGCCATCGCGCGCTGGCGCTGAAGGCGCTGCTGGCGCGGCTCGCGGAGGAAGCATGAGCATGCCCGATACC
CGTTCGCCGACGGAGGTTGC

Downstream 100 bases:

>100_bases
AGGAATGAACCTCGCGGCATTTCGGTTACAATGCCGCCTCGTGTGGAAGCGTGGCCGAGCGGTTTAAGGCACCGGTCTTG
AAAACCGGCGACGGGAAACT

Product: coproporphyrinogen III oxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 403

Protein sequence:

>404_residues
MSQAAETGARVVATFTSPGQVRLTSLPPLALYVHFPWCVRKCPYCDFNSHEWKGERFPETEYLDALRADLEQALPLVWGR
QVHTIFIGGGTPSLLSAAGLDRMLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVGIQSFNETHLKALG
RIHDTTQARAAVEIAAKNFDNFNLDLMFALPNQTLDECRTDVETALSYAPPHLSLYHLTLEPNTLFAKFPPVVPDDDASA
DMQEWIHARTAEAGYGHYEVSAYAKPNHQCKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAMAGTA
VQEEREVGARDLPFEFMLNTLRLVEGFPVHNFAERTGLPMSTIEPALQEAERRGLIARDFAQIAPTPLGQRFLNDLQELF
LRDD

Sequences:

>Translated_404_residues
MSQAAETGARVVATFTSPGQVRLTSLPPLALYVHFPWCVRKCPYCDFNSHEWKGERFPETEYLDALRADLEQALPLVWGR
QVHTIFIGGGTPSLLSAAGLDRMLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVGIQSFNETHLKALG
RIHDTTQARAAVEIAAKNFDNFNLDLMFALPNQTLDECRTDVETALSYAPPHLSLYHLTLEPNTLFAKFPPVVPDDDASA
DMQEWIHARTAEAGYGHYEVSAYAKPNHQCKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAMAGTA
VQEEREVGARDLPFEFMLNTLRLVEGFPVHNFAERTGLPMSTIEPALQEAERRGLIARDFAQIAPTPLGQRFLNDLQELF
LRDD
>Mature_403_residues
SQAAETGARVVATFTSPGQVRLTSLPPLALYVHFPWCVRKCPYCDFNSHEWKGERFPETEYLDALRADLEQALPLVWGRQ
VHTIFIGGGTPSLLSAAGLDRMLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVGIQSFNETHLKALGR
IHDTTQARAAVEIAAKNFDNFNLDLMFALPNQTLDECRTDVETALSYAPPHLSLYHLTLEPNTLFAKFPPVVPDDDASAD
MQEWIHARTAEAGYGHYEVSAYAKPNHQCKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAMAGTAV
QEEREVGARDLPFEFMLNTLRLVEGFPVHNFAERTGLPMSTIEPALQEAERRGLIARDFAQIAPTPLGQRFLNDLQELFL
RDD

Specific function: Unknown

COG id: COG0635

COG function: function code H; Coproporphyrinogen III oxidase and related Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the anaerobic coproporphyrinogen-III oxidase family [H]

Homologues:

Organism=Homo sapiens, GI8922911, Length=269, Percent_Identity=38.6617100371747, Blast_Score=178, Evalue=1e-44,
Organism=Escherichia coli, GI1789325, Length=383, Percent_Identity=53.0026109660574, Blast_Score=395, Evalue=1e-111,
Organism=Escherichia coli, GI87082341, Length=247, Percent_Identity=30.3643724696356, Blast_Score=120, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR004559
- InterPro:   IPR010723
- InterPro:   IPR007197 [H]

Pfam domain/function: PF06969 HemN_C; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 45138; Mature: 45007

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQAAETGARVVATFTSPGQVRLTSLPPLALYVHFPWCVRKCPYCDFNSHEWKGERFPET
CCCCHHCCCEEEEEECCCCEEEEECCCCEEEEEECHHHHHCCCCCCCCCCCCCCCCCCCH
EYLDALRADLEQALPLVWGRQVHTIFIGGGTPSLLSAAGLDRMLSDVRALLPLDADAEIT
HHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
LEANPGTFEAAKFAQFRASGVNRLSVGIQSFNETHLKALGRIHDTTQARAAVEIAAKNFD
EECCCCCCHHHHHHHHHHCCCCEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NFNLDLMFALPNQTLDECRTDVETALSYAPPHLSLYHLTLEPNTLFAKFPPVVPDDDASA
CCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCH
DMQEWIHARTAEAGYGHYEVSAYAKPNHQCKHNLNYWRFGDYLGIGAGAHTKLSFPNRIL
HHHHHHHHHCCCCCCCEEEEEEECCCCCHHHCCCCEEEECCEEECCCCCCCCCCCHHHHH
RQARYKHPATFIEQAMAGTAVQEEREVGARDLPFEFMLNTLRLVEGFPVHNFAERTGLPM
HHHHCCCHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCH
STIEPALQEAERRGLIARDFAQIAPTPLGQRFLNDLQELFLRDD
HHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SQAAETGARVVATFTSPGQVRLTSLPPLALYVHFPWCVRKCPYCDFNSHEWKGERFPET
CCCHHCCCEEEEEECCCCEEEEECCCCEEEEEECHHHHHCCCCCCCCCCCCCCCCCCCH
EYLDALRADLEQALPLVWGRQVHTIFIGGGTPSLLSAAGLDRMLSDVRALLPLDADAEIT
HHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
LEANPGTFEAAKFAQFRASGVNRLSVGIQSFNETHLKALGRIHDTTQARAAVEIAAKNFD
EECCCCCCHHHHHHHHHHCCCCEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NFNLDLMFALPNQTLDECRTDVETALSYAPPHLSLYHLTLEPNTLFAKFPPVVPDDDASA
CCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCH
DMQEWIHARTAEAGYGHYEVSAYAKPNHQCKHNLNYWRFGDYLGIGAGAHTKLSFPNRIL
HHHHHHHHHCCCCCCCEEEEEEECCCCCHHHCCCCEEEECCEEECCCCCCCCCCCHHHHH
RQARYKHPATFIEQAMAGTAVQEEREVGARDLPFEFMLNTLRLVEGFPVHNFAERTGLPM
HHHHCCCHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCH
STIEPALQEAERRGLIARDFAQIAPTPLGQRFLNDLQELFLRDD
HHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]