| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is yicG [C]
Identifier: 78065547
GI number: 78065547
Start: 1002647
End: 1003270
Strand: Reverse
Name: yicG [C]
Synonym: Bcep18194_A4075
Alternate gene names: 78065547
Gene position: 1003270-1002647 (Counterclockwise)
Preceding gene: 78065548
Following gene: 78065542
Centisome position: 27.16
GC content: 66.51
Gene sequence:
>624_bases GTGCCGCATCCTAGGCTGACGCTCGCGATCGCGATACTGGAGGCGATCGCCACGCTGGCCTTTGCGATCTCGGGCTTCAT CGAGGCGCGCAAGAACCGCCTCGACTCGGTCGGCACGTTCGTCGTCGCGCTCGCCACCGCGTTCGGCGGCGGCACGCTGC GCGACATCCTGCTCGAACGCCGGCCGTTCTACTGGGTCGTGCACGACGACTACGTGATCGCGATCTTCGTGCTCGCGCTG TTCGCGCCGTTCGTGCTGCGAATGCTGTCGCGACTGTCGGCCGAGCGGTTGCTGCTCGTCGCCGATGCGATCGGGCTGGG GATCTTCAGCATCTCGGGCACGGCGATCGCGCTCGATGCCGAGATGCCGCGCTTCATCGCGGTGATGATGGGCGTGATCA CGGGCGTGGTCGGCGGGATCATCCGCGACGTGCTGTGCAACGATATCCCGCTGATCCTGCGCGATTCGCGGCCTTACGCG ACCTGCGCGTTCGTCGGCTGCTGGTTCTACCTGCTGCTCGTGTGGCTGCAGTTCGACTCGGTGTACAGCGTGCTGCTCGC GACCGGCTTCATCCTCGTCGCGCGGCTCGCGACGTTCAAGTTCGACGTGCGGCTGCCGCACTGA
Upstream 100 bases:
>100_bases GAAGTTATCGCGTTCTGCGAGGCACGCGGCAACGACGGCGGCGCGGGCGCGGTTCTGGTGCTGCTGCAACCGTTCGCGGC GCCCGGCGACCGGGGGCCGC
Downstream 100 bases:
>100_bases CTGCCAAAGCAGCGACAGTCGGAGCGCAAAAACAAAGGGGCCGTCCGAAGACGGCCCCTTTTTGCTTCGTTCAGCGCCCG CGCGACATCACGCGATCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MPHPRLTLAIAILEAIATLAFAISGFIEARKNRLDSVGTFVVALATAFGGGTLRDILLERRPFYWVVHDDYVIAIFVLAL FAPFVLRMLSRLSAERLLLVADAIGLGIFSISGTAIALDAEMPRFIAVMMGVITGVVGGIIRDVLCNDIPLILRDSRPYA TCAFVGCWFYLLLVWLQFDSVYSVLLATGFILVARLATFKFDVRLPH
Sequences:
>Translated_207_residues MPHPRLTLAIAILEAIATLAFAISGFIEARKNRLDSVGTFVVALATAFGGGTLRDILLERRPFYWVVHDDYVIAIFVLAL FAPFVLRMLSRLSAERLLLVADAIGLGIFSISGTAIALDAEMPRFIAVMMGVITGVVGGIIRDVLCNDIPLILRDSRPYA TCAFVGCWFYLLLVWLQFDSVYSVLLATGFILVARLATFKFDVRLPH >Mature_206_residues PHPRLTLAIAILEAIATLAFAISGFIEARKNRLDSVGTFVVALATAFGGGTLRDILLERRPFYWVVHDDYVIAIFVLALF APFVLRMLSRLSAERLLLVADAIGLGIFSISGTAIALDAEMPRFIAVMMGVITGVVGGIIRDVLCNDIPLILRDSRPYAT CAFVGCWFYLLLVWLQFDSVYSVLLATGFILVARLATFKFDVRLPH
Specific function: Unknown
COG id: COG2860
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0126 family [H]
Homologues:
Organism=Escherichia coli, GI87082304, Length=162, Percent_Identity=39.5061728395062, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1786352, Length=199, Percent_Identity=38.6934673366834, Blast_Score=93, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005115 [H]
Pfam domain/function: PF03458 UPF0126 [H]
EC number: NA
Molecular weight: Translated: 22780; Mature: 22648
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHPRLTLAIAILEAIATLAFAISGFIEARKNRLDSVGTFVVALATAFGGGTLRDILLER CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHC RPFYWVVHDDYVIAIFVLALFAPFVLRMLSRLSAERLLLVADAIGLGIFSISGTAIALDA CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEECC EMPRFIAVMMGVITGVVGGIIRDVLCNDIPLILRDSRPYATCAFVGCWFYLLLVWLQFDS CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH VYSVLLATGFILVARLATFKFDVRLPH HHHHHHHHHHHHHHHHHHHHEEEECCC >Mature Secondary Structure PHPRLTLAIAILEAIATLAFAISGFIEARKNRLDSVGTFVVALATAFGGGTLRDILLER CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHC RPFYWVVHDDYVIAIFVLALFAPFVLRMLSRLSAERLLLVADAIGLGIFSISGTAIALDA CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEECC EMPRFIAVMMGVITGVVGGIIRDVLCNDIPLILRDSRPYATCAFVGCWFYLLLVWLQFDS CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH VYSVLLATGFILVARLATFKFDVRLPH HHHHHHHHHHHHHHHHHHHHEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10688204 [H]