| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78065501
Identifier: 78065501
GI number: 78065501
Start: 955709
End: 956326
Strand: Reverse
Name: 78065501
Synonym: Bcep18194_A4029
Alternate gene names: NA
Gene position: 956326-955709 (Counterclockwise)
Preceding gene: 78065507
Following gene: 78065498
Centisome position: 25.89
GC content: 66.5
Gene sequence:
>618_bases ATGGACTACCTGCCGATTCCCGCGATCTTCGTCGCCGACGCGCCTGGCCTCGACTTCCTGAACTCCGTCGCAACGCCGGT GGATCAGGAGGTTGACTGGATCCGCGACGGCGAAGGCTTGCTGGCGTGGCTGGAACAGGCCGGCATGGTGCCGGCGGACG CACTCGCGGCACTGCGGTCGCATTCGACGCCGGCCGAGTTCGACGCGGTCGCGGCGCAGGCGCGTGCGCTACGCGAATGG TTCAGGGCATTCGTCCGCGCACGGAAAGGACGGCCGCTGGCTGCCGCGGACCTGAGCGAACTCGAGCGGCTGAATCAGCT GCTGGAGCGGGACGAACGATATGAAGAACTCGTCGCGGACGACGCGAACGGTTTTGCACTTCGGGAAAAACGGCGCTGGC GATCGCCGGAGTCGCTTCTGATGCCGATCGCGCAAGCGCTCACGAAGCTCGTTTGCGACGAGGACTTCACGTATGTGAAG GCATGCGAGGGCCCGCGGTGCACGCTGATGTTCGCGGATCACACGCGCGGGCACGCGCGGCGGTGGTGCAGCATGGCGAT TTGCGGCAATCGCGCGAAAGCGGCCGCGCATCGGAAGCGGGTGAAGGAGCGGGGGTAA
Upstream 100 bases:
>100_bases GCCTTGATATTCACAATCAGGTTACTCAAAGCGAGAGTAACTTGTCAAGGCGGTTTTTAGTGGTTACGATGCGTCATCAC CTTCGCCTGCCTCCCCCGTC
Downstream 100 bases:
>100_bases CGTGGTGCGACCGGAGCCGCCCATCGGGCGATGCCCGTTTATCGGTGAGGCGCCCCCGGCAACCTAAGTAGGAAGTGCCG CTTTACTGCTGCACACGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MDYLPIPAIFVADAPGLDFLNSVATPVDQEVDWIRDGEGLLAWLEQAGMVPADALAALRSHSTPAEFDAVAAQARALREW FRAFVRARKGRPLAAADLSELERLNQLLERDERYEELVADDANGFALREKRRWRSPESLLMPIAQALTKLVCDEDFTYVK ACEGPRCTLMFADHTRGHARRWCSMAICGNRAKAAAHRKRVKERG
Sequences:
>Translated_205_residues MDYLPIPAIFVADAPGLDFLNSVATPVDQEVDWIRDGEGLLAWLEQAGMVPADALAALRSHSTPAEFDAVAAQARALREW FRAFVRARKGRPLAAADLSELERLNQLLERDERYEELVADDANGFALREKRRWRSPESLLMPIAQALTKLVCDEDFTYVK ACEGPRCTLMFADHTRGHARRWCSMAICGNRAKAAAHRKRVKERG >Mature_205_residues MDYLPIPAIFVADAPGLDFLNSVATPVDQEVDWIRDGEGLLAWLEQAGMVPADALAALRSHSTPAEFDAVAAQARALREW FRAFVRARKGRPLAAADLSELERLNQLLERDERYEELVADDANGFALREKRRWRSPESLLMPIAQALTKLVCDEDFTYVK ACEGPRCTLMFADHTRGHARRWCSMAICGNRAKAAAHRKRVKERG
Specific function: Unknown
COG id: COG5516
COG function: function code R; Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23036; Mature: 23036
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYLPIPAIFVADAPGLDFLNSVATPVDQEVDWIRDGEGLLAWLEQAGMVPADALAALRS CCCCCCCEEEEECCCCHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHC HSTPAEFDAVAAQARALREWFRAFVRARKGRPLAAADLSELERLNQLLERDERYEELVAD CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC DANGFALREKRRWRSPESLLMPIAQALTKLVCDEDFTYVKACEGPRCTLMFADHTRGHAR CCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEECCCCCHHHH RWCSMAICGNRAKAAAHRKRVKERG HHHHHHHHCCHHHHHHHHHHHHHCC >Mature Secondary Structure MDYLPIPAIFVADAPGLDFLNSVATPVDQEVDWIRDGEGLLAWLEQAGMVPADALAALRS CCCCCCCEEEEECCCCHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHC HSTPAEFDAVAAQARALREWFRAFVRARKGRPLAAADLSELERLNQLLERDERYEELVAD CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC DANGFALREKRRWRSPESLLMPIAQALTKLVCDEDFTYVKACEGPRCTLMFADHTRGHAR CCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEECCCCCHHHH RWCSMAICGNRAKAAAHRKRVKERG HHHHHHHHCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA