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The map label for this gene is yggA [H]

Identifier: 78065507

GI number: 78065507

Start: 960834

End: 961478

Strand: Reverse

Name: yggA [H]

Synonym: Bcep18194_A4035

Alternate gene names: 78065507

Gene position: 961478-960834 (Counterclockwise)

Preceding gene: 78065508

Following gene: 78065501

Centisome position: 26.03

GC content: 67.6

Gene sequence:

>645_bases
GTGCTCGACACCTCTGCCTTCATCGAAGGCCTGCTGCTTGGCGCCGGACTGTTCACGTCCGTCGGCCCCAAGGACGCATT
CGTCATCAAGCGCTCGATCTCGAGCCCCCATCTGCTTTCCATTGCCCTCGTCTGCGCAGGCAGCGACGCGTTGCTGATCG
CGCTCGGCGCGCACGGGTTGTCGTCGCTGCTATCGCGACATCCCGGCGTGGTGTCGGCCGCGCTGTGGGCCGGCATCGCG
TATCTCGCCGGCTATGGCCTGCTCGCGCTGCGTTCGGCGATCCGACGGCGACAGCCTGAGCACGTCGACGGTCCGCGCAC
GGGCAGCGAACCCACGCGTGCGCGCACGGTGCTCGCGACTGCCGCCGTCTCGTTGCTCAATCCGTATGCGTGGATCGACA
CCGTGCTGCTGCTCGGCACCGTGATCGTGAGCCACACGCCCGCCGCACGTGCGCCGTTTGCGTTTGGCGCGATGACGGCT
TCGCTCGCGTGGTTCCTGATGCTCGCCTATGGCGCGCGTGCGTGCCGCGCATGGTTCGCCCGTACGCTCGCATGGCGCGT
GCTCGATTTCTTCGTCGCGGCGATGATGCTCGGCTTCGCGGTGCGTTTCGCGATCGACGCGCTTCAGGCGTCAGCGGCTC
GATAA

Upstream 100 bases:

>100_bases
GCGGGCATCGGGGAGACATTGACAACGCCCCCCGACGCCCCTTAACGTTGCTCCCATCGTAACCATCACCGGTTCAGCTT
AAGAGGTTGTCGGCCCGCTC

Downstream 100 bases:

>100_bases
CGTGCGAAACACGTCGTGCGCGCCGGCATGCAGTTCGAAGCCGATGCCCGGCGCTTGCGGAACGCGTGCGTATCCGGCGT
CGATGCTTGCGCCGTCGGCC

Product: lysine exporter protein LysE/YggA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MLDTSAFIEGLLLGAGLFTSVGPKDAFVIKRSISSPHLLSIALVCAGSDALLIALGAHGLSSLLSRHPGVVSAALWAGIA
YLAGYGLLALRSAIRRRQPEHVDGPRTGSEPTRARTVLATAAVSLLNPYAWIDTVLLLGTVIVSHTPAARAPFAFGAMTA
SLAWFLMLAYGARACRAWFARTLAWRVLDFFVAAMMLGFAVRFAIDALQASAAR

Sequences:

>Translated_214_residues
MLDTSAFIEGLLLGAGLFTSVGPKDAFVIKRSISSPHLLSIALVCAGSDALLIALGAHGLSSLLSRHPGVVSAALWAGIA
YLAGYGLLALRSAIRRRQPEHVDGPRTGSEPTRARTVLATAAVSLLNPYAWIDTVLLLGTVIVSHTPAARAPFAFGAMTA
SLAWFLMLAYGARACRAWFARTLAWRVLDFFVAAMMLGFAVRFAIDALQASAAR
>Mature_214_residues
MLDTSAFIEGLLLGAGLFTSVGPKDAFVIKRSISSPHLLSIALVCAGSDALLIALGAHGLSSLLSRHPGVVSAALWAGIA
YLAGYGLLALRSAIRRRQPEHVDGPRTGSEPTRARTVLATAAVSLLNPYAWIDTVLLLGTVIVSHTPAARAPFAFGAMTA
SLAWFLMLAYGARACRAWFARTLAWRVLDFFVAAMMLGFAVRFAIDALQASAAR

Specific function: Unknown

COG id: COG1279

COG function: function code R; Lysine efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LysE/ArgO transporter (TC 2.A.75) family [H]

Homologues:

Organism=Escherichia coli, GI1789290, Length=205, Percent_Identity=30.7317073170732, Blast_Score=91, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004777
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 22579; Mature: 22579

Theoretical pI: Translated: 10.92; Mature: 10.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDTSAFIEGLLLGAGLFTSVGPKDAFVIKRSISSPHLLSIALVCAGSDALLIALGAHGL
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEECHHHH
SSLLSRHPGVVSAALWAGIAYLAGYGLLALRSAIRRRQPEHVDGPRTGSEPTRARTVLAT
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
AAVSLLNPYAWIDTVLLLGTVIVSHTPAARAPFAFGAMTASLAWFLMLAYGARACRAWFA
HHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTLAWRVLDFFVAAMMLGFAVRFAIDALQASAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLDTSAFIEGLLLGAGLFTSVGPKDAFVIKRSISSPHLLSIALVCAGSDALLIALGAHGL
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEECHHHH
SSLLSRHPGVVSAALWAGIAYLAGYGLLALRSAIRRRQPEHVDGPRTGSEPTRARTVLAT
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
AAVSLLNPYAWIDTVLLLGTVIVSHTPAARAPFAFGAMTASLAWFLMLAYGARACRAWFA
HHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTLAWRVLDFFVAAMMLGFAVRFAIDALQASAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9286976 [H]