| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78065492
Identifier: 78065492
GI number: 78065492
Start: 944946
End: 945527
Strand: Direct
Name: 78065492
Synonym: Bcep18194_A4020
Alternate gene names: NA
Gene position: 944946-945527 (Clockwise)
Preceding gene: 78065491
Following gene: 78065493
Centisome position: 25.58
GC content: 65.29
Gene sequence:
>582_bases ATGACCGCACCTTGCGCGCCCGGCCGGCGCCGTTTTCTCGCCGCAACCGTCGGCGCCATCGGCGTGACGCTCTCGCTTGC CGCGTGCGCGTCGACGTTCCCGTTCATCCCCGATCACTACACGTTCTCGCGCGGTGACGTGCAGAAAGCCGTCGCGCGCA AGTTCCCGTACCAGAAGACGGTCGCGCAGGTCGTCGACGTGTCGCTCGCGAACCCGGCCGTCAACTTGCTGCCCGACCAG AATCGCGTCGCCGTGCAGCTCGACGCGCATTTCGTGAGCCCGTTCCTGCGTGCGCCCGTCAGCGGCAAGTTCACCGTGTC GGGCCAGCTCGCGTACGACGCGCCCAGCCGCTCGGTCGTGCTGAAGTCGCCGGCCGTCGACAGCCTCGCGCTCGACGGCG ACGCGCAGATGTACGCGCAACAGGTTGGCGCGGCCGCCGGCCTGCTCGCGACGCAGTTGCTGACCAACTATCCGATCTAC ACGTTCAAGCCCGAACAACTGCAATTTGCCGGAGTGAACTACGAACCCGGTACAATTACGATTCTTACAAACGGCATACG CGTGGCGATCGTCGAAAAGTGA
Upstream 100 bases:
>100_bases CGGCCGCGGACATGTGCGGCGCGTCGCGCGACGACGCGCTCGCGTGGCTCACGCGTCTCGAGGCCGCGACGCGGCCGTCG CAACCAGGAGAGTGTTCAGC
Downstream 100 bases:
>100_bases CGACGAACCGCGCTCGGCCGGAGGGGGGCCGCGCGTGGAAGAGTGGCCCATTCATTCGACCATTTCGGAGTTGGGCCACG GATGGACTGGATCCTGATCT
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Lipoprotein
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MTAPCAPGRRRFLAATVGAIGVTLSLAACASTFPFIPDHYTFSRGDVQKAVARKFPYQKTVAQVVDVSLANPAVNLLPDQ NRVAVQLDAHFVSPFLRAPVSGKFTVSGQLAYDAPSRSVVLKSPAVDSLALDGDAQMYAQQVGAAAGLLATQLLTNYPIY TFKPEQLQFAGVNYEPGTITILTNGIRVAIVEK
Sequences:
>Translated_193_residues MTAPCAPGRRRFLAATVGAIGVTLSLAACASTFPFIPDHYTFSRGDVQKAVARKFPYQKTVAQVVDVSLANPAVNLLPDQ NRVAVQLDAHFVSPFLRAPVSGKFTVSGQLAYDAPSRSVVLKSPAVDSLALDGDAQMYAQQVGAAAGLLATQLLTNYPIY TFKPEQLQFAGVNYEPGTITILTNGIRVAIVEK >Mature_192_residues TAPCAPGRRRFLAATVGAIGVTLSLAACASTFPFIPDHYTFSRGDVQKAVARKFPYQKTVAQVVDVSLANPAVNLLPDQN RVAVQLDAHFVSPFLRAPVSGKFTVSGQLAYDAPSRSVVLKSPAVDSLALDGDAQMYAQQVGAAAGLLATQLLTNYPIYT FKPEQLQFAGVNYEPGTITILTNGIRVAIVEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20541; Mature: 20410
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPCAPGRRRFLAATVGAIGVTLSLAACASTFPFIPDHYTFSRGDVQKAVARKFPYQKT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHCCHHHH VAQVVDVSLANPAVNLLPDQNRVAVQLDAHFVSPFLRAPVSGKFTVSGQLAYDAPSRSVV HHHHHHHHCCCCEEEECCCCCCEEEEECHHHHHHHHHCCCCCEEEEECEEEECCCCCEEE LKSPAVDSLALDGDAQMYAQQVGAAAGLLATQLLTNYPIYTFKPEQLQFAGVNYEPGTIT EECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEECCCCCCCEEE ILTNGIRVAIVEK EEECCEEEEEEEC >Mature Secondary Structure TAPCAPGRRRFLAATVGAIGVTLSLAACASTFPFIPDHYTFSRGDVQKAVARKFPYQKT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHCCHHHH VAQVVDVSLANPAVNLLPDQNRVAVQLDAHFVSPFLRAPVSGKFTVSGQLAYDAPSRSVV HHHHHHHHCCCCEEEECCCCCCEEEEECHHHHHHHHHCCCCCEEEEECEEEECCCCCEEE LKSPAVDSLALDGDAQMYAQQVGAAAGLLATQLLTNYPIYTFKPEQLQFAGVNYEPGTIT EECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEECCCCCCCEEE ILTNGIRVAIVEK EEECCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA