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The map label for this gene is amiC [H]

Identifier: 78065486

GI number: 78065486

Start: 939861

End: 941168

Strand: Reverse

Name: amiC [H]

Synonym: Bcep18194_A4014

Alternate gene names: 78065486

Gene position: 941168-939861 (Counterclockwise)

Preceding gene: 78065487

Following gene: 78065485

Centisome position: 25.48

GC content: 64.91

Gene sequence:

>1308_bases
ATGAAACGTCGCAGTCTGTTGAAGTTCGGTTCGATGGCCGGCGCACTCGCGCTCGCGGGCAAGAGCCCGTTCGCTCACGC
GGCCGACGCGGGCACCGGCCCGATCAAGGTCGGCATCCTGCATTCGCTGTCGGGCACGATGGCGATCTCGGAGACGTCGC
TGAAGGACACCGCGCTGATGACGATCGCCGACATCAACAAGAGCGGCGGCGTGATGGGCCGCAAGCTCGAACCCGTGGTG
GTCGATCCCGCGTCGAACTGGCCGCTGTTCGCCGAGAAGGCGCGCCAGCTGCTCACGCAGGACAAGGTCGCGTGCGTGTT
CGGCTGCTGGACGTCGGTGTCGCGCAAGTCGGTGCTGCCGGTGTTCGAGGAGCTGAACGGGCTGCTCTATTACCCGGTGC
AGTACGAAGGCGAGGAAATGTCGCGCAACGTGTTCTACACGGGCGCCGCACCGAACCAGCAGGCGATCCCGGCCGTCGAG
TACCTGATGAGCGCGGAAGGCGGCGGCGCGAAGCGCTTCTTCCTGCTCGGCACCGACTACGTGTATCCGCGCACGACCAA
CAAGATCCTGCGTGCGTTCCTGAAATCGAAGGGCGTGAAGGACGCCGACATTCAGGAGGTCTACACGCCGTTCGGCCACA
GCGATTACCAGACCATCGTCGCGAACATCAAGAACTTCTCGCAAGGCGGCAAGACGACCGTGATCTCGACGATCAACGGC
GACTCGAACGTGCCGTTCTACAAGGAGCTCGGCAACCAGGGGATCAAGGCGACCGACGTGCCGGTCGTCGCGTTCTCGGT
CGGCGAGGAAGAGCTGCGCGGGATCGACACGAAGCCGCTCGTCGGTCACCTCGCCGCGTGGAATTACTTCATGTCGGTGA
AGAACCCGACCAACACGAAGTTCAAGGACCAGTTCGCCGCGTGGGTGAAGGCGAACAACCTGCCCGGCGGCGCGAAGCGC
GTGACCAACGACCCGATGGAAGCGACCTACGTCGGCATCCACATGTGGAAGCAGGCCGTCGAGAAGGCGAAGAGCACCGA
CGTCGACAAGGTGCGCGTCGCGATGGTCGGCCAGACCGTCGCCGCGCCGTCGGGCTTCACGCTCGCGATGGACGGCAACC
ATCACCTGCACAAGCCGGTGATGATCGGCGAGATCCGCGGCGACGGGCAATTCAACGTCGTGTGGAAAACCAAGACCGCG
GTGCGCGCGCAACCGTGGAGCCCGTTCATCGCGGGCAACCAGGGCAAGCCGGACATCGTCACGTCGATCCCGGCCTTCCT
GCGCCGGCAGCGCGCGGCGCTCGCCTGA

Upstream 100 bases:

>100_bases
CACGCCAGACGTGCATCCGCACGACTGGCACATGCCTTGCGTTACCCGTTGGCCAGCGCCTTCAAGGCGCACGCATATCC
AACACGTCAAGGGGAACCCG

Downstream 100 bases:

>100_bases
TGCAGGGTGGCGCGTCGCGCTTCACACGCGACGCGCCGCTCGCGCGCCGATGCCGAACCCGATGTGCCGTCCGCGCTTGC
CGAGATGAACCGCACGCGCC

Product: branched chain amino acid ABC transporter periplasmic ligand-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MKRRSLLKFGSMAGALALAGKSPFAHAADAGTGPIKVGILHSLSGTMAISETSLKDTALMTIADINKSGGVMGRKLEPVV
VDPASNWPLFAEKARQLLTQDKVACVFGCWTSVSRKSVLPVFEELNGLLYYPVQYEGEEMSRNVFYTGAAPNQQAIPAVE
YLMSAEGGGAKRFFLLGTDYVYPRTTNKILRAFLKSKGVKDADIQEVYTPFGHSDYQTIVANIKNFSQGGKTTVISTING
DSNVPFYKELGNQGIKATDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFMSVKNPTNTKFKDQFAAWVKANNLPGGAKR
VTNDPMEATYVGIHMWKQAVEKAKSTDVDKVRVAMVGQTVAAPSGFTLAMDGNHHLHKPVMIGEIRGDGQFNVVWKTKTA
VRAQPWSPFIAGNQGKPDIVTSIPAFLRRQRAALA

Sequences:

>Translated_435_residues
MKRRSLLKFGSMAGALALAGKSPFAHAADAGTGPIKVGILHSLSGTMAISETSLKDTALMTIADINKSGGVMGRKLEPVV
VDPASNWPLFAEKARQLLTQDKVACVFGCWTSVSRKSVLPVFEELNGLLYYPVQYEGEEMSRNVFYTGAAPNQQAIPAVE
YLMSAEGGGAKRFFLLGTDYVYPRTTNKILRAFLKSKGVKDADIQEVYTPFGHSDYQTIVANIKNFSQGGKTTVISTING
DSNVPFYKELGNQGIKATDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFMSVKNPTNTKFKDQFAAWVKANNLPGGAKR
VTNDPMEATYVGIHMWKQAVEKAKSTDVDKVRVAMVGQTVAAPSGFTLAMDGNHHLHKPVMIGEIRGDGQFNVVWKTKTA
VRAQPWSPFIAGNQGKPDIVTSIPAFLRRQRAALA
>Mature_435_residues
MKRRSLLKFGSMAGALALAGKSPFAHAADAGTGPIKVGILHSLSGTMAISETSLKDTALMTIADINKSGGVMGRKLEPVV
VDPASNWPLFAEKARQLLTQDKVACVFGCWTSVSRKSVLPVFEELNGLLYYPVQYEGEEMSRNVFYTGAAPNQQAIPAVE
YLMSAEGGGAKRFFLLGTDYVYPRTTNKILRAFLKSKGVKDADIQEVYTPFGHSDYQTIVANIKNFSQGGKTTVISTING
DSNVPFYKELGNQGIKATDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFMSVKNPTNTKFKDQFAAWVKANNLPGGAKR
VTNDPMEATYVGIHMWKQAVEKAKSTDVDKVRVAMVGQTVAAPSGFTLAMDGNHHLHKPVMIGEIRGDGQFNVVWKTKTA
VRAQPWSPFIAGNQGKPDIVTSIPAFLRRQRAALA

Specific function: Negatively regulates the expression of the aliphatic amidase operon. AmiC functions by inhibiting the action of AmiR at the protein level. It exhibits protein kinase activity [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000709 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47221; Mature: 47221

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRSLLKFGSMAGALALAGKSPFAHAADAGTGPIKVGILHSLSGTMAISETSLKDTALM
CCCHHHHHHHCHHCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCEEEE
TIADINKSGGVMGRKLEPVVVDPASNWPLFAEKARQLLTQDKVACVFGCWTSVSRKSVLP
EEEECCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCEEEEEEHHHHCCCHHHHH
VFEELNGLLYYPVQYEGEEMSRNVFYTGAAPNQQAIPAVEYLMSAEGGGAKRFFLLGTDY
HHHHCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCE
VYPRTTNKILRAFLKSKGVKDADIQEVYTPFGHSDYQTIVANIKNFSQGGKTTVISTING
ECCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECC
DSNVPFYKELGNQGIKATDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFMSVKNPTNTK
CCCCCHHHHHCCCCCEECCCCEEEEECCHHHHCCCCCCCHHHHHHHEEEEEEECCCCCCC
FKDQFAAWVKANNLPGGAKRVTNDPMEATYVGIHMWKQAVEKAKSTDVDKVRVAMVGQTV
HHHHHHHHEECCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCE
AAPSGFTLAMDGNHHLHKPVMIGEIRGDGQFNVVWKTKTAVRAQPWSPFIAGNQGKPDIV
ECCCCCEEEECCCCCCCCCEEEEEEECCCEEEEEEEECCEEECCCCCCCEECCCCCCHHH
TSIPAFLRRQRAALA
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRRSLLKFGSMAGALALAGKSPFAHAADAGTGPIKVGILHSLSGTMAISETSLKDTALM
CCCHHHHHHHCHHCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCEEEE
TIADINKSGGVMGRKLEPVVVDPASNWPLFAEKARQLLTQDKVACVFGCWTSVSRKSVLP
EEEECCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCEEEEEEHHHHCCCHHHHH
VFEELNGLLYYPVQYEGEEMSRNVFYTGAAPNQQAIPAVEYLMSAEGGGAKRFFLLGTDY
HHHHCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCE
VYPRTTNKILRAFLKSKGVKDADIQEVYTPFGHSDYQTIVANIKNFSQGGKTTVISTING
ECCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECC
DSNVPFYKELGNQGIKATDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFMSVKNPTNTK
CCCCCHHHHHCCCCCEECCCCEEEEECCHHHHCCCCCCCHHHHHHHEEEEEEECCCCCCC
FKDQFAAWVKANNLPGGAKRVTNDPMEATYVGIHMWKQAVEKAKSTDVDKVRVAMVGQTV
HHHHHHHHEECCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCE
AAPSGFTLAMDGNHHLHKPVMIGEIRGDGQFNVVWKTKTAVRAQPWSPFIAGNQGKPDIV
ECCCCCEEEECCCCCCCCCEEEEEEECCCEEEEEEEECCEEECCCCCCCEECCCCCCHHH
TSIPAFLRRQRAALA
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1907262; 10984043; 1762155; 7813419; 10508151; 10708652 [H]