| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
Click here to switch to the map view.
The map label for this gene is 78065473
Identifier: 78065473
GI number: 78065473
Start: 927382
End: 928266
Strand: Direct
Name: 78065473
Synonym: Bcep18194_A4001
Alternate gene names: NA
Gene position: 927382-928266 (Clockwise)
Preceding gene: 78065472
Following gene: 78065474
Centisome position: 25.1
GC content: 67.57
Gene sequence:
>885_bases ATGAGCGAATCCCAGATCATCGAAGTCCCGTCCGCCGACTGGAGCGGACACAACCTGTCGGCGCCGCGCGAGCAGCTGCT GGCCGCCGTCGAGGAAGGCAAGGTGCTGTATTTCCCGCACCTGCGCTTCGCGATCGAAGGCGGCGAGGAAGCGCTGCTCG ATCCGGCGCTCGCCGACCCGAAACGCAAGAACATCAGCCTCGCGCCGAACGGCGGCGCGCTCGCCGGCGTGCTCGGCGAC AACGTCACGCAGTCGGCGGTGCGCGCGCTCGTCGCGCGCTTCCAGCAGCAGGCCGGCACGCTCGTCGACGGCCTCTTTCC CGAATACCGCGGCAAGCTGCGCGTCGCGCCGACGAGCCTGCGGCTGATGCAGGTCGAGACGCGCCAGACGTCGTGGCGCA AGGACGACAGCCGGCTGCACGTCGACGCATTCCCGTCGCGGCCCAACTACGGCGAGCGCATCCTGCGCGTGTTCACGAAC GTGAACCCGGTCGGCGTGCCGCGCGTGTGGCGCGTCGGCGAGCCGTTCGAGGACGTCGCGAAGCGCTTCCTGCCGCACAT CAAGCCGCAGTTGCCGGGCGCCGCATGGCTGCTGAACCTGCTGCACGTGACGAAGTCGCCGCGCAGCGCGTACGACCACC TGATGCTGAACCTGCACGACAGCATGAAGGCCGATCTCGACTACCAGAAGACGGCTCCGCAGCAGACGATGCCGTTTCCG CCGGGCTGCGTGTGGATATGTTTCTCGGATCAGACTTCGCACGCTGTGATGTCCGGCCAGTTCATGCTCGAACAGACCTT CTTCCTGCCGGTCGACGCGATGGTGCGCCGCGAATGCGCGCCGCTCGGCATTCTCGAACGCCTGAAGGGCAGGGCGCTGG TTTGA
Upstream 100 bases:
>100_bases AACCCCCGTCGATCGCGCAGGTGAAGTCGGCGCTCGCGGGCTTCGGTCTCCTGTAACGCTGTCACACGTGCGAACCCGCG CGAACCCACGCGAACCGAAC
Downstream 100 bases:
>100_bases GCGCGCCTCTTCTCCGTTGCAACATGAGGGTCGCCGCATGCTGAGGGTGATCTATCGCGCGCTGTGGTGGCTCGTCGCAC CGATCGCCGTCATCCGGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MSESQIIEVPSADWSGHNLSAPREQLLAAVEEGKVLYFPHLRFAIEGGEEALLDPALADPKRKNISLAPNGGALAGVLGD NVTQSAVRALVARFQQQAGTLVDGLFPEYRGKLRVAPTSLRLMQVETRQTSWRKDDSRLHVDAFPSRPNYGERILRVFTN VNPVGVPRVWRVGEPFEDVAKRFLPHIKPQLPGAAWLLNLLHVTKSPRSAYDHLMLNLHDSMKADLDYQKTAPQQTMPFP PGCVWICFSDQTSHAVMSGQFMLEQTFFLPVDAMVRRECAPLGILERLKGRALV
Sequences:
>Translated_294_residues MSESQIIEVPSADWSGHNLSAPREQLLAAVEEGKVLYFPHLRFAIEGGEEALLDPALADPKRKNISLAPNGGALAGVLGD NVTQSAVRALVARFQQQAGTLVDGLFPEYRGKLRVAPTSLRLMQVETRQTSWRKDDSRLHVDAFPSRPNYGERILRVFTN VNPVGVPRVWRVGEPFEDVAKRFLPHIKPQLPGAAWLLNLLHVTKSPRSAYDHLMLNLHDSMKADLDYQKTAPQQTMPFP PGCVWICFSDQTSHAVMSGQFMLEQTFFLPVDAMVRRECAPLGILERLKGRALV >Mature_293_residues SESQIIEVPSADWSGHNLSAPREQLLAAVEEGKVLYFPHLRFAIEGGEEALLDPALADPKRKNISLAPNGGALAGVLGDN VTQSAVRALVARFQQQAGTLVDGLFPEYRGKLRVAPTSLRLMQVETRQTSWRKDDSRLHVDAFPSRPNYGERILRVFTNV NPVGVPRVWRVGEPFEDVAKRFLPHIKPQLPGAAWLLNLLHVTKSPRSAYDHLMLNLHDSMKADLDYQKTAPQQTMPFPP GCVWICFSDQTSHAVMSGQFMLEQTFFLPVDAMVRRECAPLGILERLKGRALV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32796; Mature: 32665
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESQIIEVPSADWSGHNLSAPREQLLAAVEEGKVLYFPHLRFAIEGGEEALLDPALADP CCCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCCEEEECCEEEEEECCCHHHCCCCCCCC KRKNISLAPNGGALAGVLGDNVTQSAVRALVARFQQQAGTLVDGLFPEYRGKLRVAPTSL CCCCEEECCCCCEEEEHHCCCHHHHHHHHHHHHHHHHHCHHHHHCCHHHCCCEEECCCCE RLMQVETRQTSWRKDDSRLHVDAFPSRPNYGERILRVFTNVNPVGVPRVWRVGEPFEDVA EEEEEHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEECCCCHHHHH KRFLPHIKPQLPGAAWLLNLLHVTKSPRSAYDHLMLNLHDSMKADLDYQKTAPQQTMPFP HHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHCCCCHHHCCCCCCCCCC PGCVWICFSDQTSHAVMSGQFMLEQTFFLPVDAMVRRECAPLGILERLKGRALV CCEEEEEECCCCCCHHHCCCEEEHHHCCCCHHHHHHHHCCCHHHHHHHCCCCCC >Mature Secondary Structure SESQIIEVPSADWSGHNLSAPREQLLAAVEEGKVLYFPHLRFAIEGGEEALLDPALADP CCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCCEEEECCEEEEEECCCHHHCCCCCCCC KRKNISLAPNGGALAGVLGDNVTQSAVRALVARFQQQAGTLVDGLFPEYRGKLRVAPTSL CCCCEEECCCCCEEEEHHCCCHHHHHHHHHHHHHHHHHCHHHHHCCHHHCCCEEECCCCE RLMQVETRQTSWRKDDSRLHVDAFPSRPNYGERILRVFTNVNPVGVPRVWRVGEPFEDVA EEEEEHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEECCCCHHHHH KRFLPHIKPQLPGAAWLLNLLHVTKSPRSAYDHLMLNLHDSMKADLDYQKTAPQQTMPFP HHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHCCCCHHHCCCCCCCCCC PGCVWICFSDQTSHAVMSGQFMLEQTFFLPVDAMVRRECAPLGILERLKGRALV CCEEEEEECCCCCCHHHCCCEEEHHHCCCCHHHHHHHHCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA