| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78065421
Identifier: 78065421
GI number: 78065421
Start: 868423
End: 868938
Strand: Direct
Name: 78065421
Synonym: Bcep18194_A3947
Alternate gene names: NA
Gene position: 868423-868938 (Clockwise)
Preceding gene: 78065420
Following gene: 78065428
Centisome position: 23.51
GC content: 70.93
Gene sequence:
>516_bases ATGGCGGAATACCGGTTCTCGACGACCTGGCGCGTGGACGCGCCGCTCGCGGTGGTGTGGGACGCGATCTACCAGGTCGA CCGCTGGCCCGACTGGTGGAAGGGTGCCGTGAGCACCGTCGAGATCGAGCCGGGCGATGCGCGCGGCGTCGGCGCGCTGC ACCGGTACACGTGGAAGGGGGCGCTGCCGTACCGGCTGACCTTCGACATGCGCGTGCGGCGCGTCGAGCCGCCGCATGCG CTCGAAGGTCGTGCGAGCGGCGCGATCGAAGGCGACGGATGCTGGTCGTTCATCGCCGATGGCGCCCGCACGATCGTGCG CTATGACTGGCACATCCGCACGCACGTGCGCTGGATGAACCGGCTGGAGCCGCTCGGTCGCCCGCTGTTCCGATGGAACC ATGACGTCGTGATGCGCGAAGGCGCGAAGGGGCTCGCGCGGCTGCTGGGCGCGGCGGTCGAGACGGAGGGCCGGACGTTC CGGCCGTTGTCGGATGCGGGCTGCGCCGATGCCTGA
Upstream 100 bases:
>100_bases CGCTCGACGACGTCGAGATCGACGTCGCGTTTCCCGAACGCTTCTTCGCGCCCTGAGCGGTGCGCTGACTCATGCCCGTG ACGGGCATGCCGGAGGCTGC
Downstream 100 bases:
>100_bases ACGCGTGTGAACGCGAGCAGCAGCGCGTAAAGCGCGTAGCGGCGTGCCGCGCCGCTCAGCGCGCGTACGCCATGACCGCG CCATCCACCACCAGTGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MAEYRFSTTWRVDAPLAVVWDAIYQVDRWPDWWKGAVSTVEIEPGDARGVGALHRYTWKGALPYRLTFDMRVRRVEPPHA LEGRASGAIEGDGCWSFIADGARTIVRYDWHIRTHVRWMNRLEPLGRPLFRWNHDVVMREGAKGLARLLGAAVETEGRTF RPLSDAGCADA
Sequences:
>Translated_171_residues MAEYRFSTTWRVDAPLAVVWDAIYQVDRWPDWWKGAVSTVEIEPGDARGVGALHRYTWKGALPYRLTFDMRVRRVEPPHA LEGRASGAIEGDGCWSFIADGARTIVRYDWHIRTHVRWMNRLEPLGRPLFRWNHDVVMREGAKGLARLLGAAVETEGRTF RPLSDAGCADA >Mature_170_residues AEYRFSTTWRVDAPLAVVWDAIYQVDRWPDWWKGAVSTVEIEPGDARGVGALHRYTWKGALPYRLTFDMRVRRVEPPHAL EGRASGAIEGDGCWSFIADGARTIVRYDWHIRTHVRWMNRLEPLGRPLFRWNHDVVMREGAKGLARLLGAAVETEGRTFR PLSDAGCADA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19520; Mature: 19389
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEYRFSTTWRVDAPLAVVWDAIYQVDRWPDWWKGAVSTVEIEPGDARGVGALHRYTWKG CCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHEEECC ALPYRLTFDMRVRRVEPPHALEGRASGAIEGDGCWSFIADGARTIVRYDWHIRTHVRWMN CCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEEEEEEHHHHHHHHH RLEPLGRPLFRWNHDVVMREGAKGLARLLGAAVETEGRTFRPLSDAGCADA HHHHCCCHHHHCCCHHEEECCHHHHHHHHHHHHCCCCCEECCCCCCCCCCC >Mature Secondary Structure AEYRFSTTWRVDAPLAVVWDAIYQVDRWPDWWKGAVSTVEIEPGDARGVGALHRYTWKG CCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHEEECC ALPYRLTFDMRVRRVEPPHALEGRASGAIEGDGCWSFIADGARTIVRYDWHIRTHVRWMN CCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEEEEEEHHHHHHHHH RLEPLGRPLFRWNHDVVMREGAKGLARLLGAAVETEGRTFRPLSDAGCADA HHHHCCCHHHHCCCHHEEECCHHHHHHHHHHHHCCCCCEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA