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The map label for this gene is dadA [H]

Identifier: 78065414

GI number: 78065414

Start: 860745

End: 861989

Strand: Direct

Name: dadA [H]

Synonym: Bcep18194_A3940

Alternate gene names: 78065414

Gene position: 860745-861989 (Clockwise)

Preceding gene: 78065413

Following gene: 78065415

Centisome position: 23.3

GC content: 71.73

Gene sequence:

>1245_bases
ATGGATTTCGACGTCATCGTTCTGGGGGCCGGCATCGTCGGCGTGTCGTCGGCGCTGCATCTGCAGGATCGCGGGCTGCG
CGTCGCGCTCGTCGACCGGCGTGCGCCCGGCGAGGAAACGAGCCACGGCAATGCGGGGCTGATCGAGCGCTCGTCGGTCG
TGCCGTACGCGTTTCCGCGCCGGCTCGGCACGCTGCTGCGCTATGCGCGCAACCGCTCGGTCGATCTCTATTGGGACTAC
CGCGCGCTGCCCGCGTATGCGGGCTGGCTTGCGCGCTTCTGGCGCGAATCGTCGCCGCAGCGGCTCGCGGCCGCCGCGCG
CGACCTGTTGCCGCTCGTCGCGGCGAGCGTCGTGGAGCACGACGCGCTGCTCGCGCGCACCGATGCCCAGCCGCTCGTGC
ACGACGGCGGGTGGATCGAGGCGTTCCGTTCGCCCGCGCTGTTCGATGCGGAAACCCGCGCGCAGCAGCGCGTGGCCGAC
GCGCACGGGCTGCGGATGACCGTGCTCGACGCACGTGCGTTGCGGGCGCGCGAGCCCGGCGTCAGCGACGCGTTCTGCGG
CGCATTCCACTGGCAGGACCCGAAGACCGTGTCGAGCCCGGGCGGGCTGACCAAGGCCTACGCGCGGCTGTTCGAGCGCG
ACGGCGGCACGTTCGCGCTTGGCGATGCCAGGACGCTCGTGCAGGTGGATGACGGCTGGCAGGTCGGTACCGAACACGGG
CCGATTTCGGCGCGCTCCGCCGTGGTTGCGCTCGGGCCGTGGTCCGATCACGTCTTTGAGCCGCTCGGCTACCGGATTCC
GCTGCGCGCGAAGCGCGGCTACCACATGCATTACCGGCCGACGCGCGCACCGTTGAACGTGCCCGTGTGCGATACCGAGG
AAGGTTTCGTCGTCGCGCCGATGGAAGGCGGCCGCCTGCGGCTCACGACCGGCGTCGAGATCGCGCTGCGCGGCGCACCG
CCGACCGGCGTGCAGCTCGCGCGCGCCGAGCCGCTGGCACGCGATGCGTTCGGGATCGGCGAGCGGCTCGATCCCGAGCC
GTGGCTCGGGATGCGGCCGTGCACGCCTGACATGCGCCCGGTGATCGGGCCCGCGCCTCGCCATCGCCACCTGTGGTTTG
CGTTCGGCCATTGTCATCACGGGCTCACGCTCGGGCCCGCAACCGGACGCCTGCTCGCCGAAATGATGACGGGCGCACCG
ACCTATATCGATCCCCATCCGTACCGCCCCGCGCGCTTCGGCTGA

Upstream 100 bases:

>100_bases
AAGTACTTCAAGCGCGACATCGTTTCGAAGTAGTCACCGCCGTGCGCCGGCCGCCGCGCCGGCGCGTGTCGCATCGAATC
TCGACGCAGTACGGAGAACC

Downstream 100 bases:

>100_bases
TCCGGCGGCGCGCGCCGCGTCGCGCGTGCCGGCCTTCACAGTGTTTCAGTCTGCTATCCGAATTATCGGAAATCACGCAA
TCGGAAATGATCTGCGTAAT

Product: D-amino-acid dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MDFDVIVLGAGIVGVSSALHLQDRGLRVALVDRRAPGEETSHGNAGLIERSSVVPYAFPRRLGTLLRYARNRSVDLYWDY
RALPAYAGWLARFWRESSPQRLAAAARDLLPLVAASVVEHDALLARTDAQPLVHDGGWIEAFRSPALFDAETRAQQRVAD
AHGLRMTVLDARALRAREPGVSDAFCGAFHWQDPKTVSSPGGLTKAYARLFERDGGTFALGDARTLVQVDDGWQVGTEHG
PISARSAVVALGPWSDHVFEPLGYRIPLRAKRGYHMHYRPTRAPLNVPVCDTEEGFVVAPMEGGRLRLTTGVEIALRGAP
PTGVQLARAEPLARDAFGIGERLDPEPWLGMRPCTPDMRPVIGPAPRHRHLWFAFGHCHHGLTLGPATGRLLAEMMTGAP
TYIDPHPYRPARFG

Sequences:

>Translated_414_residues
MDFDVIVLGAGIVGVSSALHLQDRGLRVALVDRRAPGEETSHGNAGLIERSSVVPYAFPRRLGTLLRYARNRSVDLYWDY
RALPAYAGWLARFWRESSPQRLAAAARDLLPLVAASVVEHDALLARTDAQPLVHDGGWIEAFRSPALFDAETRAQQRVAD
AHGLRMTVLDARALRAREPGVSDAFCGAFHWQDPKTVSSPGGLTKAYARLFERDGGTFALGDARTLVQVDDGWQVGTEHG
PISARSAVVALGPWSDHVFEPLGYRIPLRAKRGYHMHYRPTRAPLNVPVCDTEEGFVVAPMEGGRLRLTTGVEIALRGAP
PTGVQLARAEPLARDAFGIGERLDPEPWLGMRPCTPDMRPVIGPAPRHRHLWFAFGHCHHGLTLGPATGRLLAEMMTGAP
TYIDPHPYRPARFG
>Mature_414_residues
MDFDVIVLGAGIVGVSSALHLQDRGLRVALVDRRAPGEETSHGNAGLIERSSVVPYAFPRRLGTLLRYARNRSVDLYWDY
RALPAYAGWLARFWRESSPQRLAAAARDLLPLVAASVVEHDALLARTDAQPLVHDGGWIEAFRSPALFDAETRAQQRVAD
AHGLRMTVLDARALRAREPGVSDAFCGAFHWQDPKTVSSPGGLTKAYARLFERDGGTFALGDARTLVQVDDGWQVGTEHG
PISARSAVVALGPWSDHVFEPLGYRIPLRAKRGYHMHYRPTRAPLNVPVCDTEEGFVVAPMEGGRLRLTTGVEIALRGAP
PTGVQLARAEPLARDAFGIGERLDPEPWLGMRPCTPDMRPVIGPAPRHRHLWFAFGHCHHGLTLGPATGRLLAEMMTGAP
TYIDPHPYRPARFG

Specific function: Oxidative deamination of D-amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=419, Percent_Identity=25.7756563245823, Blast_Score=99, Evalue=6e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 45387; Mature: 45387

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFDVIVLGAGIVGVSSALHLQDRGLRVALVDRRAPGEETSHGNAGLIERSSVVPYAFPR
CCCEEEEEECCHHHHCCEEEEECCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCCHHHH
RLGTLLRYARNRSVDLYWDYRALPAYAGWLARFWRESSPQRLAAAARDLLPLVAASVVEH
HHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
DALLARTDAQPLVHDGGWIEAFRSPALFDAETRAQQRVADAHGLRMTVLDARALRAREPG
HHHEEECCCCCEEECCCHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEECHHHHHCCCCC
VSDAFCGAFHWQDPKTVSSPGGLTKAYARLFERDGGTFALGDARTLVQVDDGWQVGTEHG
CCCHHHCEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCEEEEEECCCEEECCCCC
PISARSAVVALGPWSDHVFEPLGYRIPLRAKRGYHMHYRPTRAPLNVPVCDTEEGFVVAP
CCCCCCEEEEECCCCHHHHCCCCCEEEEECCCCCEEEECCCCCCCCCCEECCCCCEEEEE
MEGGRLRLTTGVEIALRGAPPTGVQLARAEPLARDAFGIGERLDPEPWLGMRPCTPDMRP
CCCCEEEEEECEEEEEECCCCCCEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC
VIGPAPRHRHLWFAFGHCHHGLTLGPATGRLLAEMMTGAPTYIDPHPYRPARFG
CCCCCCCCCEEEEEEEECCCCCEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDFDVIVLGAGIVGVSSALHLQDRGLRVALVDRRAPGEETSHGNAGLIERSSVVPYAFPR
CCCEEEEEECCHHHHCCEEEEECCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCCHHHH
RLGTLLRYARNRSVDLYWDYRALPAYAGWLARFWRESSPQRLAAAARDLLPLVAASVVEH
HHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
DALLARTDAQPLVHDGGWIEAFRSPALFDAETRAQQRVADAHGLRMTVLDARALRAREPG
HHHEEECCCCCEEECCCHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEECHHHHHCCCCC
VSDAFCGAFHWQDPKTVSSPGGLTKAYARLFERDGGTFALGDARTLVQVDDGWQVGTEHG
CCCHHHCEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCEEEEEECCCEEECCCCC
PISARSAVVALGPWSDHVFEPLGYRIPLRAKRGYHMHYRPTRAPLNVPVCDTEEGFVVAP
CCCCCCEEEEECCCCHHHHCCCCCEEEEECCCCCEEEECCCCCCCCCCEECCCCCEEEEE
MEGGRLRLTTGVEIALRGAPPTGVQLARAEPLARDAFGIGERLDPEPWLGMRPCTPDMRP
CCCCEEEEEECEEEEEECCCCCCEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC
VIGPAPRHRHLWFAFGHCHHGLTLGPATGRLLAEMMTGAPTYIDPHPYRPARFG
CCCCCCCCCEEEEEEEECCCCCEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA