| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78065407
Identifier: 78065407
GI number: 78065407
Start: 851954
End: 853789
Strand: Direct
Name: 78065407
Synonym: Bcep18194_A3933
Alternate gene names: NA
Gene position: 851954-853789 (Clockwise)
Preceding gene: 78065406
Following gene: 78065413
Centisome position: 23.06
GC content: 66.01
Gene sequence:
>1836_bases ATGACGACACGGAAGTCCTTGAAAGACGGTTTCGCGCTATTCGGAACGACACTGAGCGTGCCGCTCGCTGCAGCCGCGGC CGCCGCGCTGCTCGTCACGGGGTGCGGTGGCGACGACGGGTCGGGCCCGGCCGCTTCGGCCGCCGCCGCGGCCGCGACGT CGGCCGGCGCCAGCACGTCGGCCAACACCAACGCAACGGCCGCCGCGGCCGACCAGCCTTACGTCGACAACGACGTGTAC GGCACCGGGCCGAACGACGCGGTCACGGATTCCACGGAAGGGGCGGCTGTCGTGCACCGCACGGTCACGATCGGCGGCAA GACCATCAAGTACACGGCTACCACGGGCCACCTGACGACGATCGATCCGACCACGTCGGCGCCGAACGCGAAGATGTTCT ACGTCGCGTACACGCAGGACAATCCGGACCCGTCGAAGCCGCGCCCGGTCACGTTCTTCTACAACGGCGGCCCGGGCTCG TCGTCGGTCTACCTGCTGCTCGGCTCGTACGGGCCGAAGCGCCTGCAGTCGTCGTTCCCGAACTTCACGCCGCCCGCGCC GTACAAGCTGCTCGACAACCCGGACAGCCTGCTCGACCGCACCGACCTCGTGTTCATCAACCCGGTCGGCACCGGTTACT CGACGGCGATCGCCCCGGCGAAGAACAAGGACTTCTGGGGCACCGACCAGGACGCCCGCTCGATCGACCGCTTCATCCAG CGCTACCTGACCAAGTACTCGCGCTGGAATTCGCCGAAGTTCCTGTACGGCGAGTCGTACGGCACCGCGCGCAGCGCAGT CGTGTCGTGGGTGCTGCATGAAGACGGCATCGACCTGAACGGGATCACGCTGCAGTCGTCGATCCTCGACTACGCGAACG CGCTGTCCGCGCCGGGCACGTTCCCGACGCTCGCGGCCGACGCGTTCTACTGGAAGAAGACGACGCTCAACCCGACGCCG ACCGATCTCGACGCGTACATGATCCAGGCCCGCAACTATGCGGACAACACGCTCGCGCCGCTCGCGCAGAAGCCGAACCC GCAGGACGGCGGCTTCGTGAACGTGCGCCTGAACCTGAACCTTCAGACCGCGCAGCAGATGGGCTCGTACATCGGCACGG ATCCGACGTCGCTGATCCAGACGTTCGGCAACCCGGCCGCGCTCGGCAACGTGCCGTCGTCGGATGACAACCCGCCGTAC ACGTTCTTCCTGACGCTCGTGCCGGGCACGCAGATCGGCCAGTACGACGGTCGCGCGAACTTCACGGGCAAGGGCATCGC GCCGTACATCCTGCCGAACTCGGGCAGCAACGATCCGTCGATCACGAACGTCGGCGGCGCGTACACGGTGCTGTGGAACA GCTATATCAACACCGACCTCAAGTACACGTCGACGTCGTCGTTCGTGGACCTGAACGACCAGGTCTTCAACAACTGGGAC TTCAGCCACACGGACCCGACCGGCGCGAACAAGGGCGGCGGCAATACGCTGTACACGGCCGGCGACCTGGCGTCGACGAT GAGCGTGAACCCGGACCTGAAGGTGCTGTCGGCCAACGGCTATTTCGACGCCGTCACGCCGTTCCACCAGACGGAGCTGA CGCTCGCGCAGATGCCGCTCGACCCGACGCTCAAGGCGCAGAACCTGACGATCAAGAACTACCCGTCGGGCCACATGATC TACCTGAACGACGCGTCGCGGACCGCGCTGAAGGGCGATCTCGCCAACTTCTACGACGGCATCCTGGCCAACCGCACTGC GCTGCAGCGCGTGCTGAAGCTGCAGATGCGCACGCAGCAGCTCAAGCAGCAGAAGTTGCAGCAGCAGGGGCAGTAA
Upstream 100 bases:
>100_bases TCGGAGTGCGTCGCATAACGAATGCATTCCCGGTGCGGAGCGCCGGCGCAAATGATCCTTTGCGACCGGCGGTATTTATC GTTCTGTTCGAGAGGCAATA
Downstream 100 bases:
>100_bases GCGACGGGGGCAGCTTGCGCCGCCTGTCATGACGTAAAGGTGTCGCCGGGTCACGTGCGCCCGCTTTTCGCGTGACGTAT GTCGACGTCGATGCCGTTGT
Product: carboxypeptidase C (cathepsin A)-like
Products: NA
Alternate protein names: Serine Carboxypeptidase Family Protein; Carboxypeptidase-Related Protein; Serine Carboxypeptidase; Carboxypeptidase C; Serine-Type Carboxypeptidase Family Protein; Carboxypeptidase; S10 Family Peptidase; S10 Family Carboxypeptidase; Carboxypeptidase-Like Protein; Peptidase S; Serine Carboxypeptidase Superfamily
Number of amino acids: Translated: 611; Mature: 610
Protein sequence:
>611_residues MTTRKSLKDGFALFGTTLSVPLAAAAAAALLVTGCGGDDGSGPAASAAAAAATSAGASTSANTNATAAAADQPYVDNDVY GTGPNDAVTDSTEGAAVVHRTVTIGGKTIKYTATTGHLTTIDPTTSAPNAKMFYVAYTQDNPDPSKPRPVTFFYNGGPGS SSVYLLLGSYGPKRLQSSFPNFTPPAPYKLLDNPDSLLDRTDLVFINPVGTGYSTAIAPAKNKDFWGTDQDARSIDRFIQ RYLTKYSRWNSPKFLYGESYGTARSAVVSWVLHEDGIDLNGITLQSSILDYANALSAPGTFPTLAADAFYWKKTTLNPTP TDLDAYMIQARNYADNTLAPLAQKPNPQDGGFVNVRLNLNLQTAQQMGSYIGTDPTSLIQTFGNPAALGNVPSSDDNPPY TFFLTLVPGTQIGQYDGRANFTGKGIAPYILPNSGSNDPSITNVGGAYTVLWNSYINTDLKYTSTSSFVDLNDQVFNNWD FSHTDPTGANKGGGNTLYTAGDLASTMSVNPDLKVLSANGYFDAVTPFHQTELTLAQMPLDPTLKAQNLTIKNYPSGHMI YLNDASRTALKGDLANFYDGILANRTALQRVLKLQMRTQQLKQQKLQQQGQ
Sequences:
>Translated_611_residues MTTRKSLKDGFALFGTTLSVPLAAAAAAALLVTGCGGDDGSGPAASAAAAAATSAGASTSANTNATAAAADQPYVDNDVY GTGPNDAVTDSTEGAAVVHRTVTIGGKTIKYTATTGHLTTIDPTTSAPNAKMFYVAYTQDNPDPSKPRPVTFFYNGGPGS SSVYLLLGSYGPKRLQSSFPNFTPPAPYKLLDNPDSLLDRTDLVFINPVGTGYSTAIAPAKNKDFWGTDQDARSIDRFIQ RYLTKYSRWNSPKFLYGESYGTARSAVVSWVLHEDGIDLNGITLQSSILDYANALSAPGTFPTLAADAFYWKKTTLNPTP TDLDAYMIQARNYADNTLAPLAQKPNPQDGGFVNVRLNLNLQTAQQMGSYIGTDPTSLIQTFGNPAALGNVPSSDDNPPY TFFLTLVPGTQIGQYDGRANFTGKGIAPYILPNSGSNDPSITNVGGAYTVLWNSYINTDLKYTSTSSFVDLNDQVFNNWD FSHTDPTGANKGGGNTLYTAGDLASTMSVNPDLKVLSANGYFDAVTPFHQTELTLAQMPLDPTLKAQNLTIKNYPSGHMI YLNDASRTALKGDLANFYDGILANRTALQRVLKLQMRTQQLKQQKLQQQGQ >Mature_610_residues TTRKSLKDGFALFGTTLSVPLAAAAAAALLVTGCGGDDGSGPAASAAAAAATSAGASTSANTNATAAAADQPYVDNDVYG TGPNDAVTDSTEGAAVVHRTVTIGGKTIKYTATTGHLTTIDPTTSAPNAKMFYVAYTQDNPDPSKPRPVTFFYNGGPGSS SVYLLLGSYGPKRLQSSFPNFTPPAPYKLLDNPDSLLDRTDLVFINPVGTGYSTAIAPAKNKDFWGTDQDARSIDRFIQR YLTKYSRWNSPKFLYGESYGTARSAVVSWVLHEDGIDLNGITLQSSILDYANALSAPGTFPTLAADAFYWKKTTLNPTPT DLDAYMIQARNYADNTLAPLAQKPNPQDGGFVNVRLNLNLQTAQQMGSYIGTDPTSLIQTFGNPAALGNVPSSDDNPPYT FFLTLVPGTQIGQYDGRANFTGKGIAPYILPNSGSNDPSITNVGGAYTVLWNSYINTDLKYTSTSSFVDLNDQVFNNWDF SHTDPTGANKGGGNTLYTAGDLASTMSVNPDLKVLSANGYFDAVTPFHQTELTLAQMPLDPTLKAQNLTIKNYPSGHMIY LNDASRTALKGDLANFYDGILANRTALQRVLKLQMRTQQLKQQKLQQQGQ
Specific function: Unknown
COG id: COG2939
COG function: function code E; Carboxypeptidase C (cathepsin A)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65243; Mature: 65112
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRKSLKDGFALFGTTLSVPLAAAAAAALLVTGCGGDDGSGPAASAAAAAATSAGASTS CCCHHHHHCCCEEHHHHHHHHHHHHHHEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCC ANTNATAAAADQPYVDNDVYGTGPNDAVTDSTEGAAVVHRTVTIGGKTIKYTATTGHLTT CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCEEEEEEEECCEEEE IDPTTSAPNAKMFYVAYTQDNPDPSKPRPVTFFYNGGPGSSSVYLLLGSYGPKRLQSSFP ECCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCHHHHHHCCC NFTPPAPYKLLDNPDSLLDRTDLVFINPVGTGYSTAIAPAKNKDFWGTDQDARSIDRFIQ CCCCCCCCCCCCCCHHHHCCCCEEEEECCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHH RYLTKYSRWNSPKFLYGESYGTARSAVVSWVLHEDGIDLNGITLQSSILDYANALSAPGT HHHHHHHCCCCCCEEECCCCCHHHHHHHEEEECCCCCCCCCEEEHHHHHHHHHHHCCCCC FPTLAADAFYWKKTTLNPTPTDLDAYMIQARNYADNTLAPLAQKPNPQDGGFVNVRLNLN CCHHHHCCEEEEECCCCCCCCCCHHHEEEECCCCCCCHHHHHCCCCCCCCCEEEEEEEEE LQTAQQMGSYIGTDPTSLIQTFGNPAALGNVPSSDDNPPYTFFLTLVPGTQIGQYDGRAN HHHHHHHHHHCCCCHHHHHHHCCCCCEECCCCCCCCCCCEEEEEEECCCCEECCCCCCCC FTGKGIAPYILPNSGSNDPSITNVGGAYTVLWNSYINTDLKYTSTSSFVDLNDQVFNNWD CCCCCCCEEEECCCCCCCCCEEECCCEEEEEEHHHHCCCEEECCCCCEEECCHHHHCCCC FSHTDPTGANKGGGNTLYTAGDLASTMSVNPDLKVLSANGYFDAVTPFHQTELTLAQMPL CCCCCCCCCCCCCCCEEEECCCCHHHEECCCCEEEEECCCCCCCCCCCCCCCEEEEECCC DPTLKAQNLTIKNYPSGHMIYLNDASRTALKGDLANFYDGILANRTALQRVLKLQMRTQQ CCCCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKQQKLQQQGQ HHHHHHHHCCC >Mature Secondary Structure TTRKSLKDGFALFGTTLSVPLAAAAAAALLVTGCGGDDGSGPAASAAAAAATSAGASTS CCHHHHHCCCEEHHHHHHHHHHHHHHEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCC ANTNATAAAADQPYVDNDVYGTGPNDAVTDSTEGAAVVHRTVTIGGKTIKYTATTGHLTT CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCEEEEEEEECCEEEE IDPTTSAPNAKMFYVAYTQDNPDPSKPRPVTFFYNGGPGSSSVYLLLGSYGPKRLQSSFP ECCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCHHHHHHCCC NFTPPAPYKLLDNPDSLLDRTDLVFINPVGTGYSTAIAPAKNKDFWGTDQDARSIDRFIQ CCCCCCCCCCCCCCHHHHCCCCEEEEECCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHH RYLTKYSRWNSPKFLYGESYGTARSAVVSWVLHEDGIDLNGITLQSSILDYANALSAPGT HHHHHHHCCCCCCEEECCCCCHHHHHHHEEEECCCCCCCCCEEEHHHHHHHHHHHCCCCC FPTLAADAFYWKKTTLNPTPTDLDAYMIQARNYADNTLAPLAQKPNPQDGGFVNVRLNLN CCHHHHCCEEEEECCCCCCCCCCHHHEEEECCCCCCCHHHHHCCCCCCCCCEEEEEEEEE LQTAQQMGSYIGTDPTSLIQTFGNPAALGNVPSSDDNPPYTFFLTLVPGTQIGQYDGRAN HHHHHHHHHHCCCCHHHHHHHCCCCCEECCCCCCCCCCCEEEEEEECCCCEECCCCCCCC FTGKGIAPYILPNSGSNDPSITNVGGAYTVLWNSYINTDLKYTSTSSFVDLNDQVFNNWD CCCCCCCEEEECCCCCCCCCEEECCCEEEEEEHHHHCCCEEECCCCCEEECCHHHHCCCC FSHTDPTGANKGGGNTLYTAGDLASTMSVNPDLKVLSANGYFDAVTPFHQTELTLAQMPL CCCCCCCCCCCCCCCEEEECCCCHHHEECCCCEEEEECCCCCCCCCCCCCCCEEEEECCC DPTLKAQNLTIKNYPSGHMIYLNDASRTALKGDLANFYDGILANRTALQRVLKLQMRTQQ CCCCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKQQKLQQQGQ HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA