| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is cutS [H]
Identifier: 78065398
GI number: 78065398
Start: 839928
End: 841478
Strand: Direct
Name: cutS [H]
Synonym: Bcep18194_A3924
Alternate gene names: 78065398
Gene position: 839928-841478 (Clockwise)
Preceding gene: 78065396
Following gene: 78065399
Centisome position: 22.74
GC content: 69.31
Gene sequence:
>1551_bases ATGAGTGAGCCGATCCGCTTCTACCATCGTCACGCGATCCGCGAAGTCAGCGGCGCGGACGTTACCCGCACCGTGCTGCA ATACCTGCGCGAGGACGCGCATTGCACCGGCACCAAGGAAGGCTGCGCGGAAGGCGACTGCGGCGCGTGCACGGTCGTCG TCGGCGAGCTGACCGATGCCGGCGCGGTCGAGTTCAAGGCCGTCAACGCATGCATCCAGTTCCTGCCGACGCTGGACGGC AAGGCGCTGCTCACGGTCGAGGACCTGCGTCAGCCGGACGGCGCGCTGCATCCGGTGCAGCAGGCGATGGTCGACTGCCA CGGTTCGCAATGCGGGTTCTGCACGCCCGGCTTCGTGATGTCGATGTGGGCGCTGTACGAGAAGCACGGCCACGAAGGTT GCGGCAGCGCCGGCACGTGCGCGAAGGCGAAGGACGTGCCGACGCGCACCGAGATCGCCGATGCGCTGACCGGCAACCTG TGCCGCTGCACCGGCTATCGCCCGATCGTCGATGCGGCCGTGCAGATGTTCGATGCGCCCGCACCGTCGGCGCCGGTCGA CACCGCCGCGCTGGCTCGCACACTCGCGTCGCTCAAGCGCGACGATACGTTCGACTACACGACGATCAACGGCGCGCGCT TCGCGGCGCCGCGCACGCTCGACGCACTGGCCGCGCTGAAGGTCGAGCGGCCCGACGCGCGCATTCTCGCGGGCAGCACC GACATCGGCCTGTGGGTCACCAAGCAGATGCGCCGGCTCGACGACCTGATCTACGTCGGCCAGATCGCCGAACTGCAGCG CCTCATGGAGCGCGGCGACTGGATCGAGATCGGCGCGGGCGTGACGGTCGAGAAGGCGTATGCGGCGCTGGCCGGCCAGT ATCCGGAACTGACCGAGATGTGGAAGCGCTTCGCGTCGCTGCCGATCCGCAACGCGGGCACGATCGGCGGCAACGTCGCG AACGGCTCGCCGATCGGCGATTCGATGCCGGGCCTGATCGCGCTCGGCGCGCGCGTGGTGCTGCGCGGCGGCGACACGGT GCGCGAGCTGCCGCTCGAGGCACTGTACACGGGCTACCAGCAGAAGGACATGGCGCCGCACGAATTCGTCATCGGCCTGA AGGTGCCGACCCGCACCGGCGCGCGCGAGAAGCTGCAGTTCCGCACGTACAAGCTGTCGAAGCGGTTCGACTCCGACATC TCGGCCGTGTGCGCGGCGTTCGCGTTCATCGCGGACGGCGACACGATCCGCGAGCCGCGCATCGCGTTCGGCGGGATGGC CGCGACGCCGAAGCGTGCAACGCACACGGAAGCCGTGCTCGACGGCGCGCAGTGGCACGAAGCCACCGCACAGGCCGCGA TGCAGGCGCTCGAGCGCGACTACCAGCCGCTGTCCGACATGCGCGCGACGAGCACGTACCGCCTCGATACCGCGAAGAAC CTGATGTACCGATTCTGGCTGGAGACGCGCCCGCACGACCCGCTGCCGCCGCAAGCCCTGAATGTGCGTGAAGTGGCCGC CGAACTCGGCACCGACGCGGCGCGCGTCTGA
Upstream 100 bases:
>100_bases TTGCGGAATTTGATGGTGATAGCGTGCAAACTGTCAGAAAAACGTCGGTCGAGCGCACTGCGCGGGCCGCCTTGCCCCCC ATTTGAAGAACCATCGAGAC
Downstream 100 bases:
>100_bases AGACGGAGAACACCGAACATGAACCAGCAAGCAGAACCGTTCCTGAGCACCCTCGACCCGCAAGCCGACGCGGCGCAGGT CCACGTATCGCGCGCGCACG
Product: molybdopterin dehydrogenase, FAD-binding
Products: NA
Alternate protein names: CO dehydrogenase subunit S; CO-DH S [H]
Number of amino acids: Translated: 516; Mature: 515
Protein sequence:
>516_residues MSEPIRFYHRHAIREVSGADVTRTVLQYLREDAHCTGTKEGCAEGDCGACTVVVGELTDAGAVEFKAVNACIQFLPTLDG KALLTVEDLRQPDGALHPVQQAMVDCHGSQCGFCTPGFVMSMWALYEKHGHEGCGSAGTCAKAKDVPTRTEIADALTGNL CRCTGYRPIVDAAVQMFDAPAPSAPVDTAALARTLASLKRDDTFDYTTINGARFAAPRTLDALAALKVERPDARILAGST DIGLWVTKQMRRLDDLIYVGQIAELQRLMERGDWIEIGAGVTVEKAYAALAGQYPELTEMWKRFASLPIRNAGTIGGNVA NGSPIGDSMPGLIALGARVVLRGGDTVRELPLEALYTGYQQKDMAPHEFVIGLKVPTRTGAREKLQFRTYKLSKRFDSDI SAVCAAFAFIADGDTIREPRIAFGGMAATPKRATHTEAVLDGAQWHEATAQAAMQALERDYQPLSDMRATSTYRLDTAKN LMYRFWLETRPHDPLPPQALNVREVAAELGTDAARV
Sequences:
>Translated_516_residues MSEPIRFYHRHAIREVSGADVTRTVLQYLREDAHCTGTKEGCAEGDCGACTVVVGELTDAGAVEFKAVNACIQFLPTLDG KALLTVEDLRQPDGALHPVQQAMVDCHGSQCGFCTPGFVMSMWALYEKHGHEGCGSAGTCAKAKDVPTRTEIADALTGNL CRCTGYRPIVDAAVQMFDAPAPSAPVDTAALARTLASLKRDDTFDYTTINGARFAAPRTLDALAALKVERPDARILAGST DIGLWVTKQMRRLDDLIYVGQIAELQRLMERGDWIEIGAGVTVEKAYAALAGQYPELTEMWKRFASLPIRNAGTIGGNVA NGSPIGDSMPGLIALGARVVLRGGDTVRELPLEALYTGYQQKDMAPHEFVIGLKVPTRTGAREKLQFRTYKLSKRFDSDI SAVCAAFAFIADGDTIREPRIAFGGMAATPKRATHTEAVLDGAQWHEATAQAAMQALERDYQPLSDMRATSTYRLDTAKN LMYRFWLETRPHDPLPPQALNVREVAAELGTDAARV >Mature_515_residues SEPIRFYHRHAIREVSGADVTRTVLQYLREDAHCTGTKEGCAEGDCGACTVVVGELTDAGAVEFKAVNACIQFLPTLDGK ALLTVEDLRQPDGALHPVQQAMVDCHGSQCGFCTPGFVMSMWALYEKHGHEGCGSAGTCAKAKDVPTRTEIADALTGNLC RCTGYRPIVDAAVQMFDAPAPSAPVDTAALARTLASLKRDDTFDYTTINGARFAAPRTLDALAALKVERPDARILAGSTD IGLWVTKQMRRLDDLIYVGQIAELQRLMERGDWIEIGAGVTVEKAYAALAGQYPELTEMWKRFASLPIRNAGTIGGNVAN GSPIGDSMPGLIALGARVVLRGGDTVRELPLEALYTGYQQKDMAPHEFVIGLKVPTRTGAREKLQFRTYKLSKRFDSDIS AVCAAFAFIADGDTIREPRIAFGGMAATPKRATHTEAVLDGAQWHEATAQAAMQALERDYQPLSDMRATSTYRLDTAKNL MYRFWLETRPHDPLPPQALNVREVAAELGTDAARV
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG4630
COG function: function code F; Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI91823271, Length=525, Percent_Identity=29.3333333333333, Blast_Score=166, Evalue=5e-41, Organism=Homo sapiens, GI71773480, Length=104, Percent_Identity=46.1538461538462, Blast_Score=100, Evalue=3e-21, Organism=Escherichia coli, GI1789231, Length=290, Percent_Identity=26.8965517241379, Blast_Score=93, Evalue=5e-20, Organism=Escherichia coli, GI1786480, Length=155, Percent_Identity=38.0645161290323, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1789232, Length=149, Percent_Identity=36.9127516778523, Blast_Score=83, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17540638, Length=549, Percent_Identity=26.9581056466302, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI17539860, Length=482, Percent_Identity=26.5560165975104, Blast_Score=122, Evalue=4e-28, Organism=Caenorhabditis elegans, GI32566215, Length=481, Percent_Identity=25.5717255717256, Blast_Score=121, Evalue=1e-27, Organism=Drosophila melanogaster, GI17737937, Length=506, Percent_Identity=31.0276679841897, Blast_Score=212, Evalue=4e-55, Organism=Drosophila melanogaster, GI24647197, Length=522, Percent_Identity=27.9693486590038, Blast_Score=160, Evalue=1e-39, Organism=Drosophila melanogaster, GI24647199, Length=501, Percent_Identity=27.9441117764471, Blast_Score=158, Evalue=7e-39, Organism=Drosophila melanogaster, GI24647201, Length=502, Percent_Identity=25.8964143426295, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI24647193, Length=501, Percent_Identity=27.9441117764471, Blast_Score=149, Evalue=5e-36, Organism=Drosophila melanogaster, GI24647195, Length=338, Percent_Identity=31.3609467455621, Blast_Score=143, Evalue=3e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 55997; Mature: 55866
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: PS00197 2FE2S_FER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPIRFYHRHAIREVSGADVTRTVLQYLREDAHCTGTKEGCAEGDCGACTVVVGELTDA CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCC GAVEFKAVNACIQFLPTLDGKALLTVEDLRQPDGALHPVQQAMVDCHGSQCGFCTPGFVM CCHHHHHHHHHHHHHCCCCCCEEEEHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHH SMWALYEKHGHEGCGSAGTCAKAKDVPTRTEIADALTGNLCRCTGYRPIVDAAVQMFDAP HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCC APSAPVDTAALARTLASLKRDDTFDYTTINGARFAAPRTLDALAALKVERPDARILAGST CCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEECCC DIGLWVTKQMRRLDDLIYVGQIAELQRLMERGDWIEIGAGVTVEKAYAALAGQYPELTEM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCHHHHHH WKRFASLPIRNAGTIGGNVANGSPIGDSMPGLIALGARVVLRGGDTVRELPLEALYTGYQ HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEECCCHHHHCCHHHHHCCCH QKDMAPHEFVIGLKVPTRTGAREKLQFRTYKLSKRFDSDISAVCAAFAFIADGDTIREPR HCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCC IAFGGMAATPKRATHTEAVLDGAQWHEATAQAAMQALERDYQPLSDMRATSTYRLDTAKN HHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCEEECHHHHH LMYRFWLETRPHDPLPPQALNVREVAAELGTDAARV HHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHHCCC >Mature Secondary Structure SEPIRFYHRHAIREVSGADVTRTVLQYLREDAHCTGTKEGCAEGDCGACTVVVGELTDA CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCC GAVEFKAVNACIQFLPTLDGKALLTVEDLRQPDGALHPVQQAMVDCHGSQCGFCTPGFVM CCHHHHHHHHHHHHHCCCCCCEEEEHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHH SMWALYEKHGHEGCGSAGTCAKAKDVPTRTEIADALTGNLCRCTGYRPIVDAAVQMFDAP HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCC APSAPVDTAALARTLASLKRDDTFDYTTINGARFAAPRTLDALAALKVERPDARILAGST CCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEECCC DIGLWVTKQMRRLDDLIYVGQIAELQRLMERGDWIEIGAGVTVEKAYAALAGQYPELTEM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCHHHHHH WKRFASLPIRNAGTIGGNVANGSPIGDSMPGLIALGARVVLRGGDTVRELPLEALYTGYQ HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEECCCHHHHCCHHHHHCCCH QKDMAPHEFVIGLKVPTRTGAREKLQFRTYKLSKRFDSDISAVCAAFAFIADGDTIREPR HCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCC IAFGGMAATPKRATHTEAVLDGAQWHEATAQAAMQALERDYQPLSDMRATSTYRLDTAKN HHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCEEECHHHHH LMYRFWLETRPHDPLPPQALNVREVAAELGTDAARV HHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]