| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
Click here to switch to the map view.
The map label for this gene is 78065382
Identifier: 78065382
GI number: 78065382
Start: 820830
End: 821240
Strand: Direct
Name: 78065382
Synonym: Bcep18194_A3908
Alternate gene names: NA
Gene position: 820830-821240 (Clockwise)
Preceding gene: 78065381
Following gene: 78065384
Centisome position: 22.22
GC content: 64.96
Gene sequence:
>411_bases ATGTCTCACGCAGAAGCGATGGAAGGCGGATGCGCATGCGGCGCGATCCGGTACCGGATCGTCCATGTTCCGACCGACGC CGGTTTTTGCCACTGCCGGCTCTGCCAGCGCACGACAGGCGCGGCGGTCGTCGCGTCGGCATCGGTGCCGATCGACGCGT TCGAATACCTGCAAGGTGAGCCGACGGTCTATGCGTCGAGCGCGTGGGGCGAGCGGCGTTTCTGCGGCCGTTGTGGTGCG CAGCTCGAATACCGGCTCATCGATGCCCCCAAGACGGTCGAGATCAATTCCGCGACGCTCGACGAGCCGTCGCAGCTGCG TCCGGCCTGGCATGTCTGGTATGGAGATCGCTTCCCGGGCATCGAGATCGGCGACGATCTGCCCAAGTATGACGATGGCG GAAGGGCGTAA
Upstream 100 bases:
>100_bases TCGGGTGAAAACGCACGAGCGCGACACGGCCGCGGCCGGTTGTGCCACCGGCGAACCGCGCGCATGATCGTTCGCCAGCT CACCGACGCAGAGGGTTGCC
Downstream 100 bases:
>100_bases GCGGTAGATAACCGCCGACACCGACACCGACACCGACACCGACACCGACATCGAGGCGCGTGCGCGCCCGCGAAGCCGCT CTTTCCACGAGGCCGGCAAC
Product: glutathione-dependent formaldehyde-activating, GFA
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MSHAEAMEGGCACGAIRYRIVHVPTDAGFCHCRLCQRTTGAAVVASASVPIDAFEYLQGEPTVYASSAWGERRFCGRCGA QLEYRLIDAPKTVEINSATLDEPSQLRPAWHVWYGDRFPGIEIGDDLPKYDDGGRA
Sequences:
>Translated_136_residues MSHAEAMEGGCACGAIRYRIVHVPTDAGFCHCRLCQRTTGAAVVASASVPIDAFEYLQGEPTVYASSAWGERRFCGRCGA QLEYRLIDAPKTVEINSATLDEPSQLRPAWHVWYGDRFPGIEIGDDLPKYDDGGRA >Mature_135_residues SHAEAMEGGCACGAIRYRIVHVPTDAGFCHCRLCQRTTGAAVVASASVPIDAFEYLQGEPTVYASSAWGERRFCGRCGAQ LEYRLIDAPKTVEINSATLDEPSQLRPAWHVWYGDRFPGIEIGDDLPKYDDGGRA
Specific function: Unknown
COG id: COG3791
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14854; Mature: 14723
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 5.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHAEAMEGGCACGAIRYRIVHVPTDAGFCHCRLCQRTTGAAVVASASVPIDAFEYLQGE CCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEECCCCCCCEEEEECCCCCHHHHHHCCC PTVYASSAWGERRFCGRCGAQLEYRLIDAPKTVEINSATLDEPSQLRPAWHVWYGDRFPG CCEEECCCCCCCHHHHHCCCEEEEEEECCCCEEEECCCCCCCCCCCCCEEEEEECCCCCC IEIGDDLPKYDDGGRA CCCCCCCCCCCCCCCC >Mature Secondary Structure SHAEAMEGGCACGAIRYRIVHVPTDAGFCHCRLCQRTTGAAVVASASVPIDAFEYLQGE CCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEECCCCCCCEEEEECCCCCHHHHHHCCC PTVYASSAWGERRFCGRCGAQLEYRLIDAPKTVEINSATLDEPSQLRPAWHVWYGDRFPG CCEEECCCCCCCHHHHHCCCEEEEEEECCCCEEEECCCCCCCCCCCCCEEEEEECCCCCC IEIGDDLPKYDDGGRA CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA