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The map label for this gene is ydfG [C]

Identifier: 78065345

GI number: 78065345

Start: 782312

End: 783103

Strand: Direct

Name: ydfG [C]

Synonym: Bcep18194_A3871

Alternate gene names: 78065345

Gene position: 782312-783103 (Clockwise)

Preceding gene: 78065344

Following gene: 78065346

Centisome position: 21.18

GC content: 59.72

Gene sequence:

>792_bases
ATGGTTAAACACATGCCAAGTAATGTCGTCATCACGGGCGCCAGTGCGGGAATTGGCCGCGCGCTCGCGATTGCCTATGC
GTCGCCGGGTGTTGTGCTGGGGCTTATCGGCCGTGATGTCGCGCGGCTCGAATCATGCGCAGCGGACTGCCGCGCGCGTG
GCGCCGTGGTCGTCTTGAATTCGATCGACGTACGTGATGCCGAGGCGATGCGGGTATGGCTCGACTGCTTCGATGACGAA
CATCCGATCGACTTGCTTATCGCGAATGCGGGCGTTGCGAGCACCCTTGCGAATTCGCGCGACTGGGAGGGGCGGGAGCG
TACCGTGCGCATAGTCGATACCAACTTCTACGGCGTAATCCATGCGGTGTTGCCGGTGATTGACCGGATGAAAGCACGCA
AGCGCGGTCACGTCGCCATGGTGGCGTCGCTTGCAGCGCTGCGCGGTATGGCGATTTCGCCAGCCTATTGCGCGAGCAAA
TCCGCAATCAAGGCGTACGCTGATTCAGTGCGTCCACTTCTGAGGCGCGATGGTATTCGCATCGCCGTGATCTTGCCCGG
CTTCGTCAAGACTGCAATGAGCGATGTGTTCCCTGGAGATAAATTATTCATGTGGAGTGCTGACCAGGCAGCTTCCTATA
TCCGCCGCAAGCTTGGAGCTGGCCGAGCGGAGATCGCATTTCCGGGGTTGCTTGCGTTCGGTATGCGTTTGCTGCCGCTG
CTGCCTATCGCGCTTGCGGATGCAATCCTGGACCGGTTGTCGTATCTGCCGTCCGAGGAAGATCCTTCGTGA

Upstream 100 bases:

>100_bases
GATTACGTGGTGCACCACACACAGATCAACGGTGATTTCTATACAAAGACGGGCATCGAAATGGCTGTTGGCGGGGTGGT
CGCTCGCCTCGAGGGCGAGC

Downstream 100 bases:

>100_bases
TCGTCGAGTTTGGTTTCGCGTGTGCATTTGCGGCAGGGATCTCGTTTCTGCCGGACCGCCTCGCTGTTCCGCGCGGAGCA
GTACGACGTCCGGTGCGTGC

Product: Short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MVKHMPSNVVITGASAGIGRALAIAYASPGVVLGLIGRDVARLESCAADCRARGAVVVLNSIDVRDAEAMRVWLDCFDDE
HPIDLLIANAGVASTLANSRDWEGRERTVRIVDTNFYGVIHAVLPVIDRMKARKRGHVAMVASLAALRGMAISPAYCASK
SAIKAYADSVRPLLRRDGIRIAVILPGFVKTAMSDVFPGDKLFMWSADQAASYIRRKLGAGRAEIAFPGLLAFGMRLLPL
LPIALADAILDRLSYLPSEEDPS

Sequences:

>Translated_263_residues
MVKHMPSNVVITGASAGIGRALAIAYASPGVVLGLIGRDVARLESCAADCRARGAVVVLNSIDVRDAEAMRVWLDCFDDE
HPIDLLIANAGVASTLANSRDWEGRERTVRIVDTNFYGVIHAVLPVIDRMKARKRGHVAMVASLAALRGMAISPAYCASK
SAIKAYADSVRPLLRRDGIRIAVILPGFVKTAMSDVFPGDKLFMWSADQAASYIRRKLGAGRAEIAFPGLLAFGMRLLPL
LPIALADAILDRLSYLPSEEDPS
>Mature_263_residues
MVKHMPSNVVITGASAGIGRALAIAYASPGVVLGLIGRDVARLESCAADCRARGAVVVLNSIDVRDAEAMRVWLDCFDDE
HPIDLLIANAGVASTLANSRDWEGRERTVRIVDTNFYGVIHAVLPVIDRMKARKRGHVAMVASLAALRGMAISPAYCASK
SAIKAYADSVRPLLRRDGIRIAVILPGFVKTAMSDVFPGDKLFMWSADQAASYIRRKLGAGRAEIAFPGLLAFGMRLLPL
LPIALADAILDRLSYLPSEEDPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI7657478, Length=190, Percent_Identity=31.0526315789474, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI20149619, Length=199, Percent_Identity=28.643216080402, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI210032110, Length=258, Percent_Identity=25.1937984496124, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI31542939, Length=192, Percent_Identity=30.2083333333333, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI40807363, Length=262, Percent_Identity=28.6259541984733, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI4503817, Length=188, Percent_Identity=28.1914893617021, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI19743808, Length=223, Percent_Identity=24.6636771300448, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI7706318, Length=194, Percent_Identity=27.8350515463918, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI150247226, Length=215, Percent_Identity=28.8372093023256, Blast_Score=65, Evalue=4e-11,
Organism=Escherichia coli, GI1787820, Length=200, Percent_Identity=29, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI87082100, Length=200, Percent_Identity=32, Blast_Score=68, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17538486, Length=218, Percent_Identity=33.4862385321101, Blast_Score=85, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI72000259, Length=236, Percent_Identity=29.6610169491525, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17563726, Length=204, Percent_Identity=28.4313725490196, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17560220, Length=199, Percent_Identity=27.1356783919598, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17567345, Length=194, Percent_Identity=26.2886597938144, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17565030, Length=205, Percent_Identity=29.7560975609756, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17562990, Length=201, Percent_Identity=26.865671641791, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17559104, Length=196, Percent_Identity=29.0816326530612, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=193, Percent_Identity=34.1968911917098, Blast_Score=86, Evalue=6e-18,
Organism=Drosophila melanogaster, GI24580925, Length=205, Percent_Identity=30.7317073170732, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24644339, Length=189, Percent_Identity=29.1005291005291, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI23397609, Length=187, Percent_Identity=34.2245989304813, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI281364892, Length=246, Percent_Identity=27.6422764227642, Blast_Score=71, Evalue=9e-13,
Organism=Drosophila melanogaster, GI21358495, Length=208, Percent_Identity=25.9615384615385, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24649181, Length=256, Percent_Identity=23.4375, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28571526, Length=185, Percent_Identity=25.9459459459459, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI21357041, Length=191, Percent_Identity=26.7015706806283, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 28239; Mature: 28239

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKHMPSNVVITGASAGIGRALAIAYASPGVVLGLIGRDVARLESCAADCRARGAVVVLN
CCCCCCCCEEEECCCCCCCHHEEEEECCCCEEEEHHHHHHHHHHHHHHHHHCCCEEEEEE
SIDVRDAEAMRVWLDCFDDEHPIDLLIANAGVASTLANSRDWEGRERTVRIVDTNFYGVI
CCCCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHCCCCCCCCCCCEEEEEECCHHHHH
HAVLPVIDRMKARKRGHVAMVASLAALRGMAISPAYCASKSAIKAYADSVRPLLRRDGIR
HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCE
IAVILPGFVKTAMSDVFPGDKLFMWSADQAASYIRRKLGAGRAEIAFPGLLAFGMRLLPL
EEEEECHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LPIALADAILDRLSYLPSEEDPS
HHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MVKHMPSNVVITGASAGIGRALAIAYASPGVVLGLIGRDVARLESCAADCRARGAVVVLN
CCCCCCCCEEEECCCCCCCHHEEEEECCCCEEEEHHHHHHHHHHHHHHHHHCCCEEEEEE
SIDVRDAEAMRVWLDCFDDEHPIDLLIANAGVASTLANSRDWEGRERTVRIVDTNFYGVI
CCCCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHCCCCCCCCCCCEEEEEECCHHHHH
HAVLPVIDRMKARKRGHVAMVASLAALRGMAISPAYCASKSAIKAYADSVRPLLRRDGIR
HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCE
IAVILPGFVKTAMSDVFPGDKLFMWSADQAASYIRRKLGAGRAEIAFPGLLAFGMRLLPL
EEEEECHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LPIALADAILDRLSYLPSEEDPS
HHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1730672 [H]