Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
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Accession | NC_007510 |
Length | 3,694,126 |
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The map label for this gene is rkpI [H]
Identifier: 78065346
GI number: 78065346
Start: 783100
End: 784629
Strand: Direct
Name: rkpI [H]
Synonym: Bcep18194_A3872
Alternate gene names: 78065346
Gene position: 783100-784629 (Clockwise)
Preceding gene: 78065345
Following gene: 78065347
Centisome position: 21.2
GC content: 55.75
Gene sequence:
>1530_bases GTGATCGTCGAGTTTGGTTTCGCGTGTGCATTTGCGGCAGGGATCTCGTTTCTGCCGGACCGCCTCGCTGTTCCGCGCGG AGCAGTACGACGTCCGGTGCGTGCATATCTGCTTCACTCATTGGCGGTAGTTTTTCTTACGTCAGTCTTTCTGCTAGTCA CTGCCCGTCCAATTTTTTCGGCGTCCATGGCTATTGCAGTCGTCGCACTCGTTGCGCTCGTGAGTAATGCAAAATACGAG TCGCTTCGTGAGCCGTTCGTATTCAGTGATCTCAGTCTCTTTAGTCAGCTGTTTTCGCATCCGCGTCTGTACCTGCCATT TCTGAGCGCTGGCAAAGTAGCGGCAATTGGCGTTGGCCTGCTGGCCGTAGTTGGCTGGTATCTTGCGGAGCTGCCTGTAG CTCCCCGCCCAGCAATCGTGTCGTTGATCGCAGCTAGCTTCGCATTTGTGTTGACACGGCACTATTCAAGGGCGCTGCCG CTGACGCTTGATCCAGGCATTGACCAGCAACGCCATGGCTTTTTTACCGTGTTTGTTGCGTATTTGCTGAATGGCCTGCG TCCCGCGACGTTTGACGCGTTCAGGCGTGCAACTGAGGCGAGTCCATTTGCGTTTGGTATGCGGTCAACGCGCCCCGACG TCATCGTGATCCAGAGCGAATCGTTTTTTGATGCAACGCGCATTTCACCGAGCGTTGTGCCCACATTGTTTGCGAACTTT GATCGCGCATGCAGCGAGGCGGCCAGTTACGGCGCGCTTGCGGTTCCTGCTTGGGGCGCAAATACGATGCGGACCGAGTT CGCAGTGCTGACGGGCGTACCTTCGAGTCAGCTTGGCTACGCGCGCTTTTACCCATACGCTTTTGTACGGCGCGCTTGTG GGTCGATCGCCGCTTGGTTTCGGCAGGAGGGTTATAAAACTGTCGCGGTCCATCCGTACTATGGCGATTTCTTTGGCAGG CGCCGTGTCTTCCCTTTGCTCGGATTTGAGCAATTCCTGGACATCGCATCCTTTGGCGGTGCTCCACGAGCAGGTCCGTA TATCGCGGACGCGGCAGTGTTGGACACAGTGATCAACGAACTGGAGGCGCCTCGCGACACGCCGCTGTTCGTATTTGCTA TGACGATGGAAAACCACGGGCCGCTGCACCTCGAGCAGGTTTTGCCTGGTGAATCGTCTTCAAGGCATACTCTCGGCGAA GATGCCTCCTGGCGCGATCTGACAGCATATCTGCGACATATTGAAAACGCAGACGCGATGATCGGGCGCTTACTAGATTA TTTACGCACCAGCGATCGTGAAACAGTCGTTTGCTTTTACGGCGACCACGTTCCCGCTTTACACCATGTTTTCGAGAAAC TAGGCGTTTCTCCGCAGCACAGCGACTACTTCATTTGGCGAAATTACGGCGTAGATACCCCTGAATGCCGGGACTTGGCA GCCGAGGAACTGGGGACGGCACTGCTGAGTGTGGTACAAGACGACGGAAATCGCACGGAACAGCCGTGCGCATCCGAGAA AGCGACATAA
Upstream 100 bases:
>100_bases TGCTTGCGTTCGGTATGCGTTTGCTGCCGCTGCTGCCTATCGCGCTTGCGGATGCAATCCTGGACCGGTTGTCGTATCTG CCGTCCGAGGAAGATCCTTC
Downstream 100 bases:
>100_bases AAGATGAACAGTAAGATTGCAATAATTGGGATAGCGTGTCGATTTCCCGGGGGCGCAAACAACCCTGGCGATTTCTGGCA ACTGCTGCGCGACGAACGCG
Product: sulfatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 509; Mature: 509
Protein sequence:
>509_residues MIVEFGFACAFAAGISFLPDRLAVPRGAVRRPVRAYLLHSLAVVFLTSVFLLVTARPIFSASMAIAVVALVALVSNAKYE SLREPFVFSDLSLFSQLFSHPRLYLPFLSAGKVAAIGVGLLAVVGWYLAELPVAPRPAIVSLIAASFAFVLTRHYSRALP LTLDPGIDQQRHGFFTVFVAYLLNGLRPATFDAFRRATEASPFAFGMRSTRPDVIVIQSESFFDATRISPSVVPTLFANF DRACSEAASYGALAVPAWGANTMRTEFAVLTGVPSSQLGYARFYPYAFVRRACGSIAAWFRQEGYKTVAVHPYYGDFFGR RRVFPLLGFEQFLDIASFGGAPRAGPYIADAAVLDTVINELEAPRDTPLFVFAMTMENHGPLHLEQVLPGESSSRHTLGE DASWRDLTAYLRHIENADAMIGRLLDYLRTSDRETVVCFYGDHVPALHHVFEKLGVSPQHSDYFIWRNYGVDTPECRDLA AEELGTALLSVVQDDGNRTEQPCASEKAT
Sequences:
>Translated_509_residues MIVEFGFACAFAAGISFLPDRLAVPRGAVRRPVRAYLLHSLAVVFLTSVFLLVTARPIFSASMAIAVVALVALVSNAKYE SLREPFVFSDLSLFSQLFSHPRLYLPFLSAGKVAAIGVGLLAVVGWYLAELPVAPRPAIVSLIAASFAFVLTRHYSRALP LTLDPGIDQQRHGFFTVFVAYLLNGLRPATFDAFRRATEASPFAFGMRSTRPDVIVIQSESFFDATRISPSVVPTLFANF DRACSEAASYGALAVPAWGANTMRTEFAVLTGVPSSQLGYARFYPYAFVRRACGSIAAWFRQEGYKTVAVHPYYGDFFGR RRVFPLLGFEQFLDIASFGGAPRAGPYIADAAVLDTVINELEAPRDTPLFVFAMTMENHGPLHLEQVLPGESSSRHTLGE DASWRDLTAYLRHIENADAMIGRLLDYLRTSDRETVVCFYGDHVPALHHVFEKLGVSPQHSDYFIWRNYGVDTPECRDLA AEELGTALLSVVQDDGNRTEQPCASEKAT >Mature_509_residues MIVEFGFACAFAAGISFLPDRLAVPRGAVRRPVRAYLLHSLAVVFLTSVFLLVTARPIFSASMAIAVVALVALVSNAKYE SLREPFVFSDLSLFSQLFSHPRLYLPFLSAGKVAAIGVGLLAVVGWYLAELPVAPRPAIVSLIAASFAFVLTRHYSRALP LTLDPGIDQQRHGFFTVFVAYLLNGLRPATFDAFRRATEASPFAFGMRSTRPDVIVIQSESFFDATRISPSVVPTLFANF DRACSEAASYGALAVPAWGANTMRTEFAVLTGVPSSQLGYARFYPYAFVRRACGSIAAWFRQEGYKTVAVHPYYGDFFGR RRVFPLLGFEQFLDIASFGGAPRAGPYIADAAVLDTVINELEAPRDTPLFVFAMTMENHGPLHLEQVLPGESSSRHTLGE DASWRDLTAYLRHIENADAMIGRLLDYLRTSDRETVVCFYGDHVPALHHVFEKLGVSPQHSDYFIWRNYGVDTPECRDLA AEELGTALLSVVQDDGNRTEQPCASEKAT
Specific function: Involved in antigen K (capsular polysaccharide) biosynthesis [H]
COG id: COG1368
COG function: function code M; Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: NA
Molecular weight: Translated: 56026; Mature: 56026
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVEFGFACAFAAGISFLPDRLAVPRGAVRRPVRAYLLHSLAVVFLTSVFLLVTARPIFS CEEEEHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH ASMAIAVVALVALVSNAKYESLREPFVFSDLSLFSQLFSHPRLYLPFLSAGKVAAIGVGL HHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHH LAVVGWYLAELPVAPRPAIVSLIAASFAFVLTRHYSRALPLTLDPGIDQQRHGFFTVFVA HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHH YLLNGLRPATFDAFRRATEASPFAFGMRSTRPDVIVIQSESFFDATRISPSVVPTLFANF HHHHCCCCHHHHHHHHHHCCCCCEECCCCCCCCEEEEECCCCCHHHCCCHHHHHHHHHHH DRACSEAASYGALAVPAWGANTMRTEFAVLTGVPSSQLGYARFYPYAFVRRACGSIAAWF HHHHHHHHCCCCEEECCCCCCHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH RQEGYKTVAVHPYYGDFFGRRRVFPLLGFEQFLDIASFGGAPRAGPYIADAAVLDTVINE HHCCCEEEEECCCHHHHHCCCCCCHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH LEAPRDTPLFVFAMTMENHGPLHLEQVLPGESSSRHTLGEDASWRDLTAYLRHIENADAM HCCCCCCCEEEEEEEECCCCCEEHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHH IGRLLDYLRTSDRETVVCFYGDHVPALHHVFEKLGVSPQHSDYFIWRNYGVDTPECRDLA HHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHH AEELGTALLSVVQDDGNRTEQPCASEKAT HHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MIVEFGFACAFAAGISFLPDRLAVPRGAVRRPVRAYLLHSLAVVFLTSVFLLVTARPIFS CEEEEHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH ASMAIAVVALVALVSNAKYESLREPFVFSDLSLFSQLFSHPRLYLPFLSAGKVAAIGVGL HHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHH LAVVGWYLAELPVAPRPAIVSLIAASFAFVLTRHYSRALPLTLDPGIDQQRHGFFTVFVA HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHH YLLNGLRPATFDAFRRATEASPFAFGMRSTRPDVIVIQSESFFDATRISPSVVPTLFANF HHHHCCCCHHHHHHHHHHCCCCCEECCCCCCCCEEEEECCCCCHHHCCCHHHHHHHHHHH DRACSEAASYGALAVPAWGANTMRTEFAVLTGVPSSQLGYARFYPYAFVRRACGSIAAWF HHHHHHHHCCCCEEECCCCCCHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH RQEGYKTVAVHPYYGDFFGRRRVFPLLGFEQFLDIASFGGAPRAGPYIADAAVLDTVINE HHCCCEEEEECCCHHHHHCCCCCCHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH LEAPRDTPLFVFAMTMENHGPLHLEQVLPGESSSRHTLGEDASWRDLTAYLRHIENADAM HCCCCCCCEEEEEEEECCCCCEEHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHH IGRLLDYLRTSDRETVVCFYGDHVPALHHVFEKLGVSPQHSDYFIWRNYGVDTPECRDLA HHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHH AEELGTALLSVVQDDGNRTEQPCASEKAT HHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9079896; 11481430 [H]