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The map label for this gene is bexD [H]

Identifier: 78065333

GI number: 78065333

Start: 768567

End: 769763

Strand: Direct

Name: bexD [H]

Synonym: Bcep18194_A3859

Alternate gene names: 78065333

Gene position: 768567-769763 (Clockwise)

Preceding gene: 78065328

Following gene: 78065334

Centisome position: 20.81

GC content: 57.31

Gene sequence:

>1197_bases
ATGACGGGATTGGATCAGCAAAAAATGTCAATTTTATACCGCAGTACGTGGGTGACCATTATTGTTGGTGGCGTAATTGC
GTTGAGCGCCTGCTCGACGGTGCCAACCTCGGGACCCAGCCGCTCTCAGATCAACAGTGCTGGTGCACAGAGTAATCCTG
ATGGGATCCAGGTTGTCGACGTAACCGACGAGGTCGCCAGAAAGCTATACGCCGAGCGCGGCCGCACGGATTTTTCCGCG
ATATTGGGAAGCGACACCGCCTTCCGCCAGCAGCTTGGCGTGGGCGATGGCGTGGAAATCTCGATTTGGGAGGCGCCGCC
TGCGACGTTGTTCGGCGGCGGTGCTGCTGAAACTTCGGTAACTAGCGCGCCAAGCGGTGCGCGTGTGACCACGCTGCCGG
CACAAGTGGTGGATGGCGACGGCAATATCAACGTGCCGTTCGTCGGAGCAGTGAGGGCCGCGGGCCGTACGCCGACGCAA
CTGCAGAACTACATCGTCTCGCAACTCAAGAACAAGGCGCATGACCCGCAGGTGCTGGTCCGGCTTGCAAAGAACGAAAC
GTCGTATGTGACAGTTGTCGGAGACGTACCTGGGAGCACCCGCATGCAATTGAGCGCGCGTGGCGAGCGATTGCTGGATG
CTCTGGCTGCTGCGGGGGGCGTACGTCAGCCGATCGACAAGATCACGCTTCAGGTAACGCGCGGAAATACCGTTGCGTCA
CTGCCACTGGAATCGGTGATTCGCAACCCGCGCGAAAATGTGCCGTTGCGTGCGGGAGATGTTGTGACGGTGTTGTTCCA
ACCGTACAGCTTTACAGCGCTCGGAGCGACGGGCAAGAACGAAGAGGTCAATTTCGAGGCCCAAGGGATAACGTTGGCCC
AAGCGTTGGGGCGCTCCGGGGGGCTTCAGGATTCTCGTTCGGACGCTCAAGGCGTGTTCGTTTTCCGCCTGGAAAATGCC
AGTGCGCTCAATTGGCCGAATCAACCCGTGCGTACGACGGTTGATGGCAAAGTCCCGGTCATCTATCGCATCAATCTGCG
AGATCCGAATTCGTTTTTTGTGGCGCAGAGCTTCATGATGGATAACAAGGACTTGTTGTATGTGTCGAATGCGCCGGTGA
CGGAGATCCAGAAGGTATTGAACTTGGTGTTCTCGGTGGCCTATCCAGTTGTCACTGGTGTGCAAACATTTAAGTAA

Upstream 100 bases:

>100_bases
CATTACGTGCCCGAGCGATTCGCGGCAGAGGGGGCGTGGATCCCTGCCGATAAAACGCATATTTGATTCTACATCGTGCG
ACAATCCATGCCGCGTTTGA

Downstream 100 bases:

>100_bases
TACGTTCGATCCTGATAAGATCGTGTGTATGGCAATAGCAAGGTGAGCATGAAACGCGTCATCGCAATTGACGGTCATAA
CCTAGCACTCCAGCATGGAA

Product: polysaccharide export protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MTGLDQQKMSILYRSTWVTIIVGGVIALSACSTVPTSGPSRSQINSAGAQSNPDGIQVVDVTDEVARKLYAERGRTDFSA
ILGSDTAFRQQLGVGDGVEISIWEAPPATLFGGGAAETSVTSAPSGARVTTLPAQVVDGDGNINVPFVGAVRAAGRTPTQ
LQNYIVSQLKNKAHDPQVLVRLAKNETSYVTVVGDVPGSTRMQLSARGERLLDALAAAGGVRQPIDKITLQVTRGNTVAS
LPLESVIRNPRENVPLRAGDVVTVLFQPYSFTALGATGKNEEVNFEAQGITLAQALGRSGGLQDSRSDAQGVFVFRLENA
SALNWPNQPVRTTVDGKVPVIYRINLRDPNSFFVAQSFMMDNKDLLYVSNAPVTEIQKVLNLVFSVAYPVVTGVQTFK

Sequences:

>Translated_398_residues
MTGLDQQKMSILYRSTWVTIIVGGVIALSACSTVPTSGPSRSQINSAGAQSNPDGIQVVDVTDEVARKLYAERGRTDFSA
ILGSDTAFRQQLGVGDGVEISIWEAPPATLFGGGAAETSVTSAPSGARVTTLPAQVVDGDGNINVPFVGAVRAAGRTPTQ
LQNYIVSQLKNKAHDPQVLVRLAKNETSYVTVVGDVPGSTRMQLSARGERLLDALAAAGGVRQPIDKITLQVTRGNTVAS
LPLESVIRNPRENVPLRAGDVVTVLFQPYSFTALGATGKNEEVNFEAQGITLAQALGRSGGLQDSRSDAQGVFVFRLENA
SALNWPNQPVRTTVDGKVPVIYRINLRDPNSFFVAQSFMMDNKDLLYVSNAPVTEIQKVLNLVFSVAYPVVTGVQTFK
>Mature_397_residues
TGLDQQKMSILYRSTWVTIIVGGVIALSACSTVPTSGPSRSQINSAGAQSNPDGIQVVDVTDEVARKLYAERGRTDFSAI
LGSDTAFRQQLGVGDGVEISIWEAPPATLFGGGAAETSVTSAPSGARVTTLPAQVVDGDGNINVPFVGAVRAAGRTPTQL
QNYIVSQLKNKAHDPQVLVRLAKNETSYVTVVGDVPGSTRMQLSARGERLLDALAAAGGVRQPIDKITLQVTRGNTVASL
PLESVIRNPRENVPLRAGDVVTVLFQPYSFTALGATGKNEEVNFEAQGITLAQALGRSGGLQDSRSDAQGVFVFRLENAS
ALNWPNQPVRTTVDGKVPVIYRINLRDPNSFFVAQSFMMDNKDLLYVSNAPVTEIQKVLNLVFSVAYPVVTGVQTFK

Specific function: May form an ATP-driven capsule polysaccharide export apparatus, in association with the BexA, BexB and BexC proteins. May function as a membrane anchor for capsular polysaccharides. Possible porin properties [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1787218, Length=388, Percent_Identity=25.7731958762887, Blast_Score=125, Evalue=4e-30,
Organism=Escherichia coli, GI1788376, Length=382, Percent_Identity=25.130890052356, Blast_Score=106, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715 [H]

Pfam domain/function: PF02563 Poly_export [H]

EC number: NA

Molecular weight: Translated: 42360; Mature: 42229

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGLDQQKMSILYRSTWVTIIVGGVIALSACSTVPTSGPSRSQINSAGAQSNPDGIQVVD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCEEEEE
VTDEVARKLYAERGRTDFSAILGSDTAFRQQLGVGDGVEISIWEAPPATLFGGGAAETSV
CHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHCCCCCCCEEEEECCCCCEEECCCCCCCCC
TSAPSGARVTTLPAQVVDGDGNINVPFVGAVRAAGRTPTQLQNYIVSQLKNKAHDPQVLV
CCCCCCCEEEECCCEEECCCCCCCCCEEEHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHH
RLAKNETSYVTVVGDVPGSTRMQLSARGERLLDALAAAGGVRQPIDKITLQVTRGNTVAS
EECCCCCEEEEEEECCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEE
LPLESVIRNPRENVPLRAGDVVTVLFQPYSFTALGATGKNEEVNFEAQGITLAQALGRSG
CCHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCEEEEECCCHHHHHHCCCC
GLQDSRSDAQGVFVFRLENASALNWPNQPVRTTVDGKVPVIYRINLRDPNSFFVAQSFMM
CCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCEEEEHHHHC
DNKDLLYVSNAPVTEIQKVLNLVFSVAYPVVTGVQTFK
CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCHHCCC
>Mature Secondary Structure 
TGLDQQKMSILYRSTWVTIIVGGVIALSACSTVPTSGPSRSQINSAGAQSNPDGIQVVD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCEEEEE
VTDEVARKLYAERGRTDFSAILGSDTAFRQQLGVGDGVEISIWEAPPATLFGGGAAETSV
CHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHCCCCCCCEEEEECCCCCEEECCCCCCCCC
TSAPSGARVTTLPAQVVDGDGNINVPFVGAVRAAGRTPTQLQNYIVSQLKNKAHDPQVLV
CCCCCCCEEEECCCEEECCCCCCCCCEEEHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHH
RLAKNETSYVTVVGDVPGSTRMQLSARGERLLDALAAAGGVRQPIDKITLQVTRGNTVAS
EECCCCCEEEEEEECCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEE
LPLESVIRNPRENVPLRAGDVVTVLFQPYSFTALGATGKNEEVNFEAQGITLAQALGRSG
CCHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCEEEEECCCHHHHHHCCCC
GLQDSRSDAQGVFVFRLENASALNWPNQPVRTTVDGKVPVIYRINLRDPNSFFVAQSFMM
CCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCEEEEHHHHC
DNKDLLYVSNAPVTEIQKVLNLVFSVAYPVVTGVQTFK
CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2082145 [H]