| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is yceI [C]
Identifier: 78065279
GI number: 78065279
Start: 697766
End: 698326
Strand: Direct
Name: yceI [C]
Synonym: Bcep18194_A3803
Alternate gene names: 78065279
Gene position: 697766-698326 (Clockwise)
Preceding gene: 78065278
Following gene: 78065280
Centisome position: 18.89
GC content: 62.75
Gene sequence:
>561_bases ATGAAAGTGTCTTTCTCCCGCTCCATGCTGACCGCGTTCGCCGCGGTGTCACTTGTCGCGTCGGGCGCGGCGCTCGCCGA TGTCGATCTCGCGAAGAGCAAGGTGTCCGCCGTGTCGAAGCAGATGAACGTGCCGACCGAAGGCGCGTTCAAGAAGTTTT CCGCGCAGGTGAAGTTCGATCCGGCGAAAGCCGCGCAGGGCAGTGCCCAGATGACGATCGACGTCGCGAGCTATGACCTC GGCGACAAGATGTACAACGACCAGGTTGCCGGCAAGGACTGGTTCGACGCGAAGGCGTATCCGCAGGCCACGTTCGTATC GTCGGCGATCGCGCCGGCGGGCGGCAACAAGTACAACGTGACCGGCAAGCTGACGATCAAGGGCAAGTCCGAGAACGTCA CGGTGCCCGTCACGGTCACGCAGAGCGGCGCGACGCAGACCTTCGACGGCGTGCTGCCAATCAAGCGTTCGGCCTTCAAC GTCGGCACCGGCGAATGGAAGGACACGTCGGTCGTCGCGGACGAAGTGCAGATCAAGTTCCACCTCGTCGCCACCAAGTA A
Upstream 100 bases:
>100_bases CGCTCGTTTCGCTGCACGTGGTCGCGGCGCTCAAGCACCAGTTGTTGGACCGCGACGGCCTGCTGTCGCGGATGCTCCCC TTTGCCAAATGAAGGATCCC
Downstream 100 bases:
>100_bases GCGGCGGGCTGTTGCCTCACCCGAACGCCGCGCGAGGGCGCGGCGCCGTTCCAAGGAGAAAGAGTTTGAAAAAGCAACTG ATCATCGCCGCGGGCGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Cytochrome B; Signal Peptide Protein; YceI Like Family; Ycei Family Protein; Signal Peptide; YceI-Like Family Protein; YceI/Cytochrome
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MKVSFSRSMLTAFAAVSLVASGAALADVDLAKSKVSAVSKQMNVPTEGAFKKFSAQVKFDPAKAAQGSAQMTIDVASYDL GDKMYNDQVAGKDWFDAKAYPQATFVSSAIAPAGGNKYNVTGKLTIKGKSENVTVPVTVTQSGATQTFDGVLPIKRSAFN VGTGEWKDTSVVADEVQIKFHLVATK
Sequences:
>Translated_186_residues MKVSFSRSMLTAFAAVSLVASGAALADVDLAKSKVSAVSKQMNVPTEGAFKKFSAQVKFDPAKAAQGSAQMTIDVASYDL GDKMYNDQVAGKDWFDAKAYPQATFVSSAIAPAGGNKYNVTGKLTIKGKSENVTVPVTVTQSGATQTFDGVLPIKRSAFN VGTGEWKDTSVVADEVQIKFHLVATK >Mature_186_residues MKVSFSRSMLTAFAAVSLVASGAALADVDLAKSKVSAVSKQMNVPTEGAFKKFSAQVKFDPAKAAQGSAQMTIDVASYDL GDKMYNDQVAGKDWFDAKAYPQATFVSSAIAPAGGNKYNVTGKLTIKGKSENVTVPVTVTQSGATQTFDGVLPIKRSAFN VGTGEWKDTSVVADEVQIKFHLVATK
Specific function: Unknown
COG id: COG2353
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19582; Mature: 19582
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVSFSRSMLTAFAAVSLVASGAALADVDLAKSKVSAVSKQMNVPTEGAFKKFSAQVKFD CCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCCCCHHHHEEEEEEC PAKAAQGSAQMTIDVASYDLGDKMYNDQVAGKDWFDAKAYPQATFVSSAIAPAGGNKYNV HHHCCCCCCEEEEEEECCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEE TGKLTIKGKSENVTVPVTVTQSGATQTFDGVLPIKRSAFNVGTGEWKDTSVVADEVQIKF EEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEEEEEEE HLVATK EEEEEC >Mature Secondary Structure MKVSFSRSMLTAFAAVSLVASGAALADVDLAKSKVSAVSKQMNVPTEGAFKKFSAQVKFD CCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCCCCHHHHEEEEEEC PAKAAQGSAQMTIDVASYDLGDKMYNDQVAGKDWFDAKAYPQATFVSSAIAPAGGNKYNV HHHCCCCCCEEEEEEECCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEE TGKLTIKGKSENVTVPVTVTQSGATQTFDGVLPIKRSAFNVGTGEWKDTSVVADEVQIKF EEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEEEEEEE HLVATK EEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA