| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is yceI [C]
Identifier: 78065280
GI number: 78065280
Start: 698338
End: 698973
Strand: Direct
Name: yceI [C]
Synonym: Bcep18194_A3804
Alternate gene names: 78065280
Gene position: 698338-698973 (Clockwise)
Preceding gene: 78065279
Following gene: 78065281
Centisome position: 18.9
GC content: 63.05
Gene sequence:
>636_bases TTGCCTCACCCGAACGCCGCGCGAGGGCGCGGCGCCGTTCCAAGGAGAAAGAGTTTGAAAAAGCAACTGATCATCGCCGC GGGCGCGCTGGCAGCGTCGCTGTCGTTCTCGGCCTTTGCCGAAAGCGTCACGTACCAGTTCGACCCGAGCCACACGTACC CGAGCTTCGAGGCTGACCACATGGGCGGCCTGTCGGTCTGGCGCGGCAAGTTCGACAAGTCGAGCGGCTCCGTGACGCTC GACCGCGCGGCGAAGACGGGTACCGTCGACGTGACGACCGACATCGCGTCGATCCACACCGGCAGCGCGAAGCTCGACGA GCATCTGCAGACGGCCGAATTCTTCGACGTCGCCAAGTTCCCGCAGGCGAACTACAAGGGCGCGATCAAGTTCGACGGCG ACAAGCCGGTGTCGGTGGTCGGCAACCTGACGCTGCATGGCGTCACGAAGCCGGTCACGCTGAAGATCGATTCGTTCAAG TGCATGCCGCACCCGATGCTCAAGCGTGAAGTGTGCGGTGTCGACGCCGTCGGCGAATTCGACCGCAGCGATTTCGGCCT CGACTACGGCAAGCAGTACGGCTTCAAGATGAAGACGAAGCTGCTGATCACGGCCGAAGCGCTCAAGCAGCAGTAA
Upstream 100 bases:
>100_bases CCTTCAACGTCGGCACCGGCGAATGGAAGGACACGTCGGTCGTCGCGGACGAAGTGCAGATCAAGTTCCACCTCGTCGCC ACCAAGTAAGCGGCGGGCTG
Downstream 100 bases:
>100_bases GCCCGCCGGCCGGGCCGGCCTTCGCGCCGGCCCGCTGCGAGCCCGCCGCCGCGTTCCCGTCAGGGGGCGCGGCGGTTTTT ATTTGCGCGCCTATAATCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MPHPNAARGRGAVPRRKSLKKQLIIAAGALAASLSFSAFAESVTYQFDPSHTYPSFEADHMGGLSVWRGKFDKSSGSVTL DRAAKTGTVDVTTDIASIHTGSAKLDEHLQTAEFFDVAKFPQANYKGAIKFDGDKPVSVVGNLTLHGVTKPVTLKIDSFK CMPHPMLKREVCGVDAVGEFDRSDFGLDYGKQYGFKMKTKLLITAEALKQQ
Sequences:
>Translated_211_residues MPHPNAARGRGAVPRRKSLKKQLIIAAGALAASLSFSAFAESVTYQFDPSHTYPSFEADHMGGLSVWRGKFDKSSGSVTL DRAAKTGTVDVTTDIASIHTGSAKLDEHLQTAEFFDVAKFPQANYKGAIKFDGDKPVSVVGNLTLHGVTKPVTLKIDSFK CMPHPMLKREVCGVDAVGEFDRSDFGLDYGKQYGFKMKTKLLITAEALKQQ >Mature_210_residues PHPNAARGRGAVPRRKSLKKQLIIAAGALAASLSFSAFAESVTYQFDPSHTYPSFEADHMGGLSVWRGKFDKSSGSVTLD RAAKTGTVDVTTDIASIHTGSAKLDEHLQTAEFFDVAKFPQANYKGAIKFDGDKPVSVVGNLTLHGVTKPVTLKIDSFKC MPHPMLKREVCGVDAVGEFDRSDFGLDYGKQYGFKMKTKLLITAEALKQQ
Specific function: Unknown
COG id: COG2353
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0312 family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787295, Length=200, Percent_Identity=33.5, Blast_Score=82, Evalue=2e-17,
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007372 [H]
Pfam domain/function: PF04264 YceI [H]
EC number: NA
Molecular weight: Translated: 22898; Mature: 22767
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHPNAARGRGAVPRRKSLKKQLIIAAGALAASLSFSAFAESVTYQFDPSHTYPSFEADH CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCC MGGLSVWRGKFDKSSGSVTLDRAAKTGTVDVTTDIASIHTGSAKLDEHLQTAEFFDVAKF CCCHHHHCCCCCCCCCCEEEECCCCCCEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHCC PQANYKGAIKFDGDKPVSVVGNLTLHGVTKPVTLKIDSFKCMPHPMLKREVCGVDAVGEF CCCCCCEEEEECCCCCEEEEECEEEECCCCEEEEEECCEECCCCHHHHHHHCCCCCCCCC DRSDFGLDYGKQYGFKMKTKLLITAEALKQQ CCCCCCCCCHHHCCCEEEEEEEEEHHHHHCC >Mature Secondary Structure PHPNAARGRGAVPRRKSLKKQLIIAAGALAASLSFSAFAESVTYQFDPSHTYPSFEADH CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCC MGGLSVWRGKFDKSSGSVTLDRAAKTGTVDVTTDIASIHTGSAKLDEHLQTAEFFDVAKF CCCHHHHCCCCCCCCCCEEEECCCCCCEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHCC PQANYKGAIKFDGDKPVSVVGNLTLHGVTKPVTLKIDSFKCMPHPMLKREVCGVDAVGEF CCCCCCEEEEECCCCCEEEEECEEEECCCCEEEEEECCEECCCCHHHHHHHCCCCCCCCC DRSDFGLDYGKQYGFKMKTKLLITAEALKQQ CCCCCCCCCHHHCCCEEEEEEEEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA