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The map label for this gene is dcd [H]

Identifier: 78048448

GI number: 78048448

Start: 3286054

End: 3286623

Strand: Reverse

Name: dcd [H]

Synonym: XCV2892

Alternate gene names: 78048448

Gene position: 3286623-3286054 (Counterclockwise)

Preceding gene: 78048449

Following gene: 78048443

Centisome position: 63.47

GC content: 61.23

Gene sequence:

>570_bases
ATGAGCATCAAGAGCGACCGCTGGATCAAGCGCATGGCCGAACAGCACGCGATGATCGAGCCGTTCGAACCCGGCCAGGT
CAAGCACGATGCTGCCGGGCAGCGCATCGTCAGCTTCGGCACTTCCAGCTACGGGTACGACGTACGCTGCTCGCGCGAGT
TCAAGGTCTTTACCAACATCAACTCGACGATCGTCGATCCGAAGCACTTCGATCCCGGCAGCTTTGTCGATATCGAATCG
GATGTCTGCATCATTCCGCCGAACAGCTTCGCGCTGGCGCGTACGGTGGAATATTTCCGCATCCCGCGCGACACGCTGGT
GGTATGCCTGGGCAAGAGCACCTACGCACGTTGCGGCATCATCGTCAACGTGACCCCGCTGGAGCCGGAGTGGGAAGGCC
ACGTGACCCTGGAATTCAGCAATACCACGCCGCTGCCGGCGCGCATCTATGCCAACGAAGGCGTGGCGCAGATGCTGTTT
TTCCAGTCCGACGAAGTGTGCGAAACCTCGTACAAGGACCGCGGCGGCAAGTACCAGGGCCAGACCGGCGTGACCCTGCC
GCGGACCTGA

Upstream 100 bases:

>100_bases
CTGCTGTAGCGCATCGGGCCGGCGATGCCGGCCGCTGGTAGAATTCGCCGTCTTCGCGCGGGCCGCTCGGCCCGCCGCCT
TCCGTCTTCAAGGAACACGC

Downstream 100 bases:

>100_bases
TGGGTGGCGCGGCCGTGGCCTTCAGCAGGTCACAGCCGCCTTCTCGCGGTAGCGCAGCAATTGGCGCACACCGGCGGCGA
TCAGGAACACCGGCCACCAG

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase [H]

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MSIKSDRWIKRMAEQHAMIEPFEPGQVKHDAAGQRIVSFGTSSYGYDVRCSREFKVFTNINSTIVDPKHFDPGSFVDIES
DVCIIPPNSFALARTVEYFRIPRDTLVVCLGKSTYARCGIIVNVTPLEPEWEGHVTLEFSNTTPLPARIYANEGVAQMLF
FQSDEVCETSYKDRGGKYQGQTGVTLPRT

Sequences:

>Translated_189_residues
MSIKSDRWIKRMAEQHAMIEPFEPGQVKHDAAGQRIVSFGTSSYGYDVRCSREFKVFTNINSTIVDPKHFDPGSFVDIES
DVCIIPPNSFALARTVEYFRIPRDTLVVCLGKSTYARCGIIVNVTPLEPEWEGHVTLEFSNTTPLPARIYANEGVAQMLF
FQSDEVCETSYKDRGGKYQGQTGVTLPRT
>Mature_188_residues
SIKSDRWIKRMAEQHAMIEPFEPGQVKHDAAGQRIVSFGTSSYGYDVRCSREFKVFTNINSTIVDPKHFDPGSFVDIESD
VCIIPPNSFALARTVEYFRIPRDTLVVCLGKSTYARCGIIVNVTPLEPEWEGHVTLEFSNTTPLPARIYANEGVAQMLFF
QSDEVCETSYKDRGGKYQGQTGVTLPRT

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011962
- InterPro:   IPR008180 [H]

Pfam domain/function: PF00692 dUTPase [H]

EC number: =3.5.4.13 [H]

Molecular weight: Translated: 21266; Mature: 21135

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKSDRWIKRMAEQHAMIEPFEPGQVKHDAAGQRIVSFGTSSYGYDVRCSREFKVFTNI
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCEEEEECC
NSTIVDPKHFDPGSFVDIESDVCIIPPNSFALARTVEYFRIPRDTLVVCLGKSTYARCGI
CCEEECCCCCCCCCEEEECCCEEEECCCCCCHHHHHHHHCCCCCCEEEEECCCCCCEEEE
IVNVTPLEPEWEGHVTLEFSNTTPLPARIYANEGVAQMLFFQSDEVCETSYKDRGGKYQG
EEEEECCCCCCCCEEEEEECCCCCCCEEEECCCCCEEEEEECCCCHHHHHHHCCCCCCCC
QTGVTLPRT
CCCCCCCCC
>Mature Secondary Structure 
SIKSDRWIKRMAEQHAMIEPFEPGQVKHDAAGQRIVSFGTSSYGYDVRCSREFKVFTNI
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCEEEEECC
NSTIVDPKHFDPGSFVDIESDVCIIPPNSFALARTVEYFRIPRDTLVVCLGKSTYARCGI
CCEEECCCCCCCCCEEEECCCEEEECCCCCCHHHHHHHHCCCCCCEEEEECCCCCCEEEE
IVNVTPLEPEWEGHVTLEFSNTTPLPARIYANEGVAQMLFFQSDEVCETSYKDRGGKYQG
EEEEECCCCCCCCEEEEEECCCCCCCEEEECCCCCEEEEEECCCCHHHHHHHCCCCCCCC
QTGVTLPRT
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA