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The map label for this gene is rimP [H]

Identifier: 78048395

GI number: 78048395

Start: 3230778

End: 3231368

Strand: Reverse

Name: rimP [H]

Synonym: XCV2839

Alternate gene names: 78048395

Gene position: 3231368-3230778 (Counterclockwise)

Preceding gene: 78048396

Following gene: 78048394

Centisome position: 62.4

GC content: 61.76

Gene sequence:

>591_bases
GTGAGCGAAAAAGCGACCGAAATCGCGAATCTGCTGAGTCCAACGGTTGAGTCCCTGGGCTTGGAACTGCTGGGCGTGGA
ATATCTTCCCGCTCCAGGCGGCGCCACATTGCGCCTATATATCGACGTGCCGCTGGCCGAACAGCCCGAGCGTGTCATCA
ATGTCGACGACTGCGAGCGCGTGAGCCGCGAAGTCTCCGCCCAGCTCGACGTCGAAGACCCGATCAGCGGTAACTACACG
TTGGAAGTGTCATCGCCGGGTGTGGATCGTCCGCTGTTCACGCTGGAACAGTTCGCGCGCCACACCGGTGAGTCGGCAAA
GATCGTCTTGAAGCTGGCGCAGGATGGTCGGCGCCGCTTCCAGGGCGAGATCCTGCGCATCGATGCCGAGGCAGAGGCGG
TGGTGTTCGCTGTCGATGGCAAGGACGTGCAGATCGGCTACGACAATATCGACAAAGCGCGCATCGTGCCGGATTGGGTT
GCGCTGGGTCTGGCACCGCAGAAACCGAACAAGCCCGGCCCGAAAAAACCCGGGCACGAAAAGAAGAAACCATCCAACGA
GTCGGCGGCTGGCAAGCCGCGCGCGGAGTGA

Upstream 100 bases:

>100_bases
TCACGCAAGGGGCCCATCGGGCCCCTTGTTTTTTCCGGAACCGGAAAGTTTGCTGCCGGTTGCCGGGGTTCTACTGGCAA
TCATCTGATCAGGGCAGTCT

Downstream 100 bases:

>100_bases
CGAAATGAGCAAGGAACTTTTGCTGGTAGTGGATGCGGTCGCCAATGAAAAGGGCGTGCCGCGCGAAGTGATCTTCGAAG
CGATCGAGGCCGCGCTGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MSEKATEIANLLSPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPERVINVDDCERVSREVSAQLDVEDPISGNYT
LEVSSPGVDRPLFTLEQFARHTGESAKIVLKLAQDGRRRFQGEILRIDAEAEAVVFAVDGKDVQIGYDNIDKARIVPDWV
ALGLAPQKPNKPGPKKPGHEKKKPSNESAAGKPRAE

Sequences:

>Translated_196_residues
MSEKATEIANLLSPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPERVINVDDCERVSREVSAQLDVEDPISGNYT
LEVSSPGVDRPLFTLEQFARHTGESAKIVLKLAQDGRRRFQGEILRIDAEAEAVVFAVDGKDVQIGYDNIDKARIVPDWV
ALGLAPQKPNKPGPKKPGHEKKKPSNESAAGKPRAE
>Mature_195_residues
SEKATEIANLLSPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPERVINVDDCERVSREVSAQLDVEDPISGNYTL
EVSSPGVDRPLFTLEQFARHTGESAKIVLKLAQDGRRRFQGEILRIDAEAEAVVFAVDGKDVQIGYDNIDKARIVPDWVA
LGLAPQKPNKPGPKKPGHEKKKPSNESAAGKPRAE

Specific function: Required for maturation of 30S ribosomal subunits [H]

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family [H]

Homologues:

Organism=Escherichia coli, GI226510978, Length=159, Percent_Identity=46.5408805031447, Blast_Score=136, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003728 [H]

Pfam domain/function: PF02576 DUF150 [H]

EC number: NA

Molecular weight: Translated: 21317; Mature: 21186

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEKATEIANLLSPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPERVINVDDCER
CCHHHHHHHHHHHHHHHHCCEEEECEEEECCCCCCEEEEEEECCCCCCCCCEECCHHHHH
VSREVSAQLDVEDPISGNYTLEVSSPGVDRPLFTLEQFARHTGESAKIVLKLAQDGRRRF
HHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHC
QGEILRIDAEAEAVVFAVDGKDVQIGYDNIDKARIVPDWVALGLAPQKPNKPGPKKPGHE
CCEEEEEECCCCEEEEEECCCEEEECCCCCCCCEECCHHHHCCCCCCCCCCCCCCCCCCC
KKKPSNESAAGKPRAE
CCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SEKATEIANLLSPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPERVINVDDCER
CHHHHHHHHHHHHHHHHCCEEEECEEEECCCCCCEEEEEEECCCCCCCCCEECCHHHHH
VSREVSAQLDVEDPISGNYTLEVSSPGVDRPLFTLEQFARHTGESAKIVLKLAQDGRRRF
HHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHC
QGEILRIDAEAEAVVFAVDGKDVQIGYDNIDKARIVPDWVALGLAPQKPNKPGPKKPGHE
CCEEEEEECCCCEEEEEECCCEEEECCCCCCCCEECCHHHHCCCCCCCCCCCCCCCCCCC
KKKPSNESAAGKPRAE
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]