Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
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Accession | NC_007508 |
Length | 5,178,466 |
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The map label for this gene is gumN
Identifier: 78048330
GI number: 78048330
Start: 3153085
End: 3153486
Strand: Reverse
Name: gumN
Synonym: XCV2774
Alternate gene names: NA
Gene position: 3153486-3153085 (Counterclockwise)
Preceding gene: 78048331
Following gene: 78048329
Centisome position: 60.9
GC content: 64.68
Gene sequence:
>402_bases ATGGGTTTGATGCTGGTGTCGCTGCTGGCGACCGCCGGGGAAGCCGTGCCGCCCAAGTTGGCGACGCCGGCACCAGCAGT GGTGGATCTGGAGGCCATGGTCGTGCGCGGCGTGCAGCCCGGGCCGGGCTTGTGGAAGGTCAGCAAGGGCGATCATGTGT TGTGGATCCTGGGTACCTTGTCGCCCTTGCCGAAGCGGCTGCAGTGGCAGTCGACCGAAGTGGAAACCATCATCGGCCAG TCCCAGCAGGTGCTGGCAGCGCCAACCGTGCAGGTAGATGCGGACATGGGATTCTTCGGCAAGCTGACCTTGCTCCCGTC GGCCATGAAAGCGATGAAGAACGAAGACGGGCGCGAGCTGCGCGACATCTTGCCGGCCGACCTGTATGCGCGCTGGAGCT GA
Upstream 100 bases:
>100_bases CGTCCGAACGCTTCCCTAACGCGGCTGCTGCCGGCTTGGCGTACTGTCCGCCTCAAACAGGGGGCAAGACACCATGCAAC GCAAGGTCGCGGGATGGGGA
Downstream 100 bases:
>100_bases CCTGCCCCCACTGAGCCGTACCAGCTGAAGCTATAAAGTCCGTGAACCCAAGAGGACGGACATGAAGAAGAGCAGATTCA GCACCGAGCAGATCATCGGG
Product: GumN protein (fragment)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MGLMLVSLLATAGEAVPPKLATPAPAVVDLEAMVVRGVQPGPGLWKVSKGDHVLWILGTLSPLPKRLQWQSTEVETIIGQ SQQVLAAPTVQVDADMGFFGKLTLLPSAMKAMKNEDGRELRDILPADLYARWS
Sequences:
>Translated_133_residues MGLMLVSLLATAGEAVPPKLATPAPAVVDLEAMVVRGVQPGPGLWKVSKGDHVLWILGTLSPLPKRLQWQSTEVETIIGQ SQQVLAAPTVQVDADMGFFGKLTLLPSAMKAMKNEDGRELRDILPADLYARWS >Mature_132_residues GLMLVSLLATAGEAVPPKLATPAPAVVDLEAMVVRGVQPGPGLWKVSKGDHVLWILGTLSPLPKRLQWQSTEVETIIGQS QQVLAAPTVQVDADMGFFGKLTLLPSAMKAMKNEDGRELRDILPADLYARWS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14314; Mature: 14183
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLMLVSLLATAGEAVPPKLATPAPAVVDLEAMVVRGVQPGPGLWKVSKGDHVLWILGTL CHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHCCCCCCCCEEEECCCCEEEEEECCC SPLPKRLQWQSTEVETIIGQSQQVLAAPTVQVDADMGFFGKLTLLPSAMKAMKNEDGREL CCCCHHHCCCCCHHHHHHCCCCCEEECCCEEEECCCCCHHHHHHHHHHHHHHCCCCCHHH RDILPADLYARWS HHHCCCCCEECCC >Mature Secondary Structure GLMLVSLLATAGEAVPPKLATPAPAVVDLEAMVVRGVQPGPGLWKVSKGDHVLWILGTL HHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHCCCCCCCCEEEECCCCEEEEEECCC SPLPKRLQWQSTEVETIIGQSQQVLAAPTVQVDADMGFFGKLTLLPSAMKAMKNEDGREL CCCCHHHCCCCCHHHHHHCCCCCEEECCCEEEECCCCCHHHHHHHHHHHHHHCCCCCHHH RDILPADLYARWS HHHCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA