Click here to switch to the map view.

The map label for this gene is ykvY [H]

Identifier: 78048298

GI number: 78048298

Start: 3121567

End: 3122766

Strand: Reverse

Name: ykvY [H]

Synonym: XCV2742

Alternate gene names: 78048298

Gene position: 3122766-3121567 (Counterclockwise)

Preceding gene: 78048299

Following gene: 78048297

Centisome position: 60.3

GC content: 67.17

Gene sequence:

>1200_bases
ATGAGCAGCCAGATCGGCGGGCTGTCGCTTGCGCAAGCGCGTGCGCAACTGACGCCGTGGACACAATGCGCCGCGCCGAT
CGCCACGGACGAATACGAGCGCCGCATCGAGCGTGCGCGCACCCTCATGCGCGCGCATGGCGTGGATGCGCTGTTGATCG
GTGCCGGCACGTCGCTGCGCTATTTCACCGGCGGGCCGTGGGGGGCGAGCGAGCGTCTGGTGGCCCTGCTGCTGACGCTG
GATGGCGAGCCGGTGCTGATCTGCCCGATGTTCGAGGAAGGCTCGCTGGATGCGGTGCTGAAGATCCCGGTGACCAAATA
CCTGTGGGAAGAGCACGACGACCCGTACGCACTGGTGGTACAGGCCATGGACGAGCGCCATGCGCATGCCCTGGCGCTGG
ACCCGGGCATTGCGTTCGCCGTGCATACCGGTCTGCGTGCGCATCTGGGCAAGGCCATTCGTGATGCCGGCGCGATCATC
GATGGCTGCCGCATGTGCAAGTCGCCGGCCGAGCTGGCATTGATGCAGCAGGCTTGCGATATGACCTTGCTGGTGCAGCG
GCTGGCGGCCGGTATCGCACACGAGGGCATCGGGACCGATGAACTGGTGCGCTTCATCGACCAGGCGCACCGCGCGCTGG
GCGCCGACAACGGATCGACCTTCTGCATCGTGCAGTACGGCCACGCCACTGCGTTTCCGCACGGCATCCCGGGTGTCCAG
CACCTGCGCGAAGGCGAACTGGTGTTGATCGACACCGGCTGCACCGTGCAGGGCTACCACTCCGACATCACCCGCACCTG
GATCTATGGCGCGGCCAACGACGCGCAGCAGCGCATCTGGGACCTGGAGCAGGCCGCGCAGGCGGCGGCATTCGCAGCGA
TCCGCCCGGGCGTGGCATGCGAGGCGGTGGATCAGGCTGCGCGCAAGGTGCTGGAGGCAGCCGGGCTCGGCCCCGACTAT
CGATTGCCCGGGTTGCCGCATCGCACCGGTCATGGCTGCGGCCTGGCGATTCATGAGGCGCCTTACCTGGTGCGCGGCAA
TGCGCTGCCGTTGCAGCCGGGCATGTGTGCCAGCAACGAGCCGATGATCGTGGTGCCGGAACAGTTCGGCGTGCGCCTGG
AAGACCATTTCCACGTGACCGACGATGGCGCGCAGTGGTTCACGCCGCCGTCGGTGGCGATCGATCAACCGTTTGCGTGA

Upstream 100 bases:

>100_bases
CCGATGCACTGCTGCCTGCCGAACTGCGCCAGCGCAATCCGGGCGGCGTGGCACGTCTGGTCGATGGGCAATGGAGCACG
GCCGATCTTGGAGCCGGCGC

Downstream 100 bases:

>100_bases
GCCGTTACAGGTTCACGCACGCGTAGGAGCGCACCCGGGCGCGACGGGCAGTCCCGATGAAGCCGTCGCGCTCAGGCGCG
CTCCTGCAGCCGCCATTGCA

Product: putative proline dipeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MSSQIGGLSLAQARAQLTPWTQCAAPIATDEYERRIERARTLMRAHGVDALLIGAGTSLRYFTGGPWGASERLVALLLTL
DGEPVLICPMFEEGSLDAVLKIPVTKYLWEEHDDPYALVVQAMDERHAHALALDPGIAFAVHTGLRAHLGKAIRDAGAII
DGCRMCKSPAELALMQQACDMTLLVQRLAAGIAHEGIGTDELVRFIDQAHRALGADNGSTFCIVQYGHATAFPHGIPGVQ
HLREGELVLIDTGCTVQGYHSDITRTWIYGAANDAQQRIWDLEQAAQAAAFAAIRPGVACEAVDQAARKVLEAAGLGPDY
RLPGLPHRTGHGCGLAIHEAPYLVRGNALPLQPGMCASNEPMIVVPEQFGVRLEDHFHVTDDGAQWFTPPSVAIDQPFA

Sequences:

>Translated_399_residues
MSSQIGGLSLAQARAQLTPWTQCAAPIATDEYERRIERARTLMRAHGVDALLIGAGTSLRYFTGGPWGASERLVALLLTL
DGEPVLICPMFEEGSLDAVLKIPVTKYLWEEHDDPYALVVQAMDERHAHALALDPGIAFAVHTGLRAHLGKAIRDAGAII
DGCRMCKSPAELALMQQACDMTLLVQRLAAGIAHEGIGTDELVRFIDQAHRALGADNGSTFCIVQYGHATAFPHGIPGVQ
HLREGELVLIDTGCTVQGYHSDITRTWIYGAANDAQQRIWDLEQAAQAAAFAAIRPGVACEAVDQAARKVLEAAGLGPDY
RLPGLPHRTGHGCGLAIHEAPYLVRGNALPLQPGMCASNEPMIVVPEQFGVRLEDHFHVTDDGAQWFTPPSVAIDQPFA
>Mature_398_residues
SSQIGGLSLAQARAQLTPWTQCAAPIATDEYERRIERARTLMRAHGVDALLIGAGTSLRYFTGGPWGASERLVALLLTLD
GEPVLICPMFEEGSLDAVLKIPVTKYLWEEHDDPYALVVQAMDERHAHALALDPGIAFAVHTGLRAHLGKAIRDAGAIID
GCRMCKSPAELALMQQACDMTLLVQRLAAGIAHEGIGTDELVRFIDQAHRALGADNGSTFCIVQYGHATAFPHGIPGVQH
LREGELVLIDTGCTVQGYHSDITRTWIYGAANDAQQRIWDLEQAAQAAAFAAIRPGVACEAVDQAARKVLEAAGLGPDYR
LPGLPHRTGHGCGLAIHEAPYLVRGNALPLQPGMCASNEPMIVVPEQFGVRLEDHFHVTDDGAQWFTPPSVAIDQPFA

Specific function: Unknown

COG id: COG0006

COG function: function code E; Xaa-Pro aminopeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M24B family [H]

Homologues:

Organism=Escherichia coli, GI1788728, Length=230, Percent_Identity=35.6521739130435, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI1789275, Length=258, Percent_Identity=27.1317829457364, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1786364, Length=210, Percent_Identity=24.7619047619048, Blast_Score=70, Evalue=2e-13,
Organism=Drosophila melanogaster, GI19920384, Length=259, Percent_Identity=27.7992277992278, Blast_Score=80, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000587
- InterPro:   IPR001714
- InterPro:   IPR000994
- InterPro:   IPR001131 [H]

Pfam domain/function: PF01321 Creatinase_N; PF00557 Peptidase_M24 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 42932; Mature: 42801

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSQIGGLSLAQARAQLTPWTQCAAPIATDEYERRIERARTLMRAHGVDALLIGAGTSLR
CCCCCCCHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCEEE
YFTGGPWGASERLVALLLTLDGEPVLICPMFEEGSLDAVLKIPVTKYLWEEHDDPYALVV
EEECCCCCCHHHEEEEEEEECCCCEEEEECCCCCCCCEEEECCHHHHHHHCCCCCCEEHH
QAMDERHAHALALDPGIAFAVHTGLRAHLGKAIRDAGAIIDGCRMCKSPAELALMQQACD
HHHHCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
MTLLVQRLAAGIAHEGIGTDELVRFIDQAHRALGADNGSTFCIVQYGHATAFPHGIPGVQ
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHH
HLREGELVLIDTGCTVQGYHSDITRTWIYGAANDAQQRIWDLEQAAQAAAFAAIRPGVAC
HHCCCCEEEEECCCEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHH
EAVDQAARKVLEAAGLGPDYRLPGLPHRTGHGCGLAIHEAPYLVRGNALPLQPGMCASNE
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCC
PMIVVPEQFGVRLEDHFHVTDDGAQWFTPPSVAIDQPFA
CEEEECHHHCCEEECCEEEECCCCCEECCCCCCCCCCCC
>Mature Secondary Structure 
SSQIGGLSLAQARAQLTPWTQCAAPIATDEYERRIERARTLMRAHGVDALLIGAGTSLR
CCCCCCHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCEEE
YFTGGPWGASERLVALLLTLDGEPVLICPMFEEGSLDAVLKIPVTKYLWEEHDDPYALVV
EEECCCCCCHHHEEEEEEEECCCCEEEEECCCCCCCCEEEECCHHHHHHHCCCCCCEEHH
QAMDERHAHALALDPGIAFAVHTGLRAHLGKAIRDAGAIIDGCRMCKSPAELALMQQACD
HHHHCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
MTLLVQRLAAGIAHEGIGTDELVRFIDQAHRALGADNGSTFCIVQYGHATAFPHGIPGVQ
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHH
HLREGELVLIDTGCTVQGYHSDITRTWIYGAANDAQQRIWDLEQAAQAAAFAAIRPGVAC
HHCCCCEEEEECCCEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHH
EAVDQAARKVLEAAGLGPDYRLPGLPHRTGHGCGLAIHEAPYLVRGNALPLQPGMCASNE
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCC
PMIVVPEQFGVRLEDHFHVTDDGAQWFTPPSVAIDQPFA
CEEEECHHHCCEEECCEEEECCCCCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]