| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78048296
Identifier: 78048296
GI number: 78048296
Start: 3117772
End: 3119637
Strand: Reverse
Name: 78048296
Synonym: XCV2740
Alternate gene names: NA
Gene position: 3119637-3117772 (Counterclockwise)
Preceding gene: 78048297
Following gene: 78048295
Centisome position: 60.24
GC content: 64.79
Gene sequence:
>1866_bases ATGAGCACCACCAGCGCGTTACGCGCAAGCACATTGACCCTGTTGATTGCGGCCTGCCTGGGCGGGCTGGCCTTGCCTGT GCACGCGGCCGAGGCTGCGGCTGCGGCCACGCAGAACACTGCAGCGGCACGCTTCAAGGCCTTGTACACACGCGAGTGGC GCTGGCGCCAGGCGCAGGCGTCGGGCGCGGTGGATGAAGACAACCAGGCCACGCAGGAGCAACAGGCCGACCATCTGCCC AAGGTCGATGTCGCCACGCAGAACCAGCGCACGGCGTATTGGCAACAGGTGTTGAAGGAACTGGATGCCATCCCGCAGGC ACAGTTGTCGGCCGAAGATCAGGTGAGCTACCAAGTGTATCGGCAGCAATTGCAGGTACTGCTGGACCAGCAGCATTTTC GCGCCTGGGAAATGCCGTTCAATAGCGACTCGGCGTTCTGGAGCGATCTGGGCTTCAGCGCCGAGGCCACGCTGCGCACG CGCGAGGATTACCAGCGTTATCTGAAGATGTTGGCCGACATCCCGCGCTATTTCGCCGAGCACACCCACAATATGCGCGC CGGGCTGGCGCGCGGTTTCACCCAGCCGCGGGTCACGATGACCGGGCGCGACCAGTCCATCGCCGATGTGGCGCAGGCCA AAGGCGAGGCCAACCCGTTCTACGCGCCGTTCAAGCAGATGCCGGCGACGCTGCCGGCCGATGTGCAGGCGCAACTGCGC CAGCAGGCAGTCAAGGCCATCGATACACAGGTGGTGCCGGCATACGCCAAGCTGCTGGATTTCATCCGCAATGACTACCA GCCGCGCGCACGCACCACGCTGGCCGGCGAAGCGTTGCCGGACGGCCAGGCGTATTACCGTGCGCAGATTCGCGAGTTCA CTACGCTGGATTTGAGCCCTGACCAGATCCATCAGATCGGCTTGCAGGAGGTGGCCAAGCTGCGCACGCAGATGGACCAG ACCATCGTGGCCAGCGGCTTCAAGCCGCCGGCCGGGCAGGCGGTATTCCCGGCGTTTCTGCACTTCCTGCGGACCGACCC GCAGTTCTACGCCAAGACGCCGGAAGAGTTGCTCAAGCAGGCGGCCTGGATCGCCAAGCGCGTGGACGCCAAGGTGGGCG ATTACATCGGCCGGCTGCCGCGCCGTCGCTTCGCCATCGAGCCGGTGCCGCCGGAGCTGGCGCCGTTCTACACCGGCGGT CGCGGTGGGCCGGGCATCTATCTGGTCAATACCTACAACCTGCCGTCGCGGCCGCTGTACAACCTGACCGCGCTGACACT GCATGAGTCCTCGCCGGGCCACGCATTGCAGATGCCGCTCGCGGCAGAGGCGCAAGGCTTGCCGGAGTTCCGTCGCTACG GCTTCATCTCCGCCTACGGTGAAGGTTGGGCGCTATATTCGGAGTATCTGGGCCAGGAAATGGGCATGTACGACACGCCC TATGACCGCTTCGGTTACCTGACCTACCAGATGTGGCGCGCCTGCCGCCTGGTGATCGATACCGGCATCCACCACAAGGG CTGGACGCGCGAGCAGGCGCAGGCCTACCTGCGCGACAACACTGCGCTCAGCGAGCACGAAGTCACCACCGAGGTGGACC GCTACATCGCCTGGCCGGGGCAGGCGCTGTCGTATTACCTGGGCGAGCTGAAAATACTGGAGCTACGCCGCAAGGCAGAA GCTGCGCTTGGCGAAAAGTTCGACCTGCGCAACTTCCACGATGCGGTGCTGCAGACCGGTTCGGTGCCATTACCGGTGCT GGAAGCGCGCATCGACCGCTTCATCGCCGATGGCGGCGTGTCGCCATACCCGCCGGATGACCAGGCAGAGGCATCGGCAG AGGCGAAGGCCTCTGCCAGCGACTGA
Upstream 100 bases:
>100_bases ACGATGCGGTGCTGGGCGGAGGCGCGATGCCGCTGACACTGTTGCAGCAACGGGTGCGGCAGTGGATTGCGCAGGCCAAG GCGGCGCCGGAGGCACACCC
Downstream 100 bases:
>100_bases CACGTGCGCGCACGTGATGCTCTAATTGCAGTAACCGCGCTTTCCACACTTCGGGGCGACGTATGACCACACACGCTGCG ACCACGCAAGGCAAGTTCCA
Product: putative secreted protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 621; Mature: 620
Protein sequence:
>621_residues MSTTSALRASTLTLLIAACLGGLALPVHAAEAAAAATQNTAAARFKALYTREWRWRQAQASGAVDEDNQATQEQQADHLP KVDVATQNQRTAYWQQVLKELDAIPQAQLSAEDQVSYQVYRQQLQVLLDQQHFRAWEMPFNSDSAFWSDLGFSAEATLRT REDYQRYLKMLADIPRYFAEHTHNMRAGLARGFTQPRVTMTGRDQSIADVAQAKGEANPFYAPFKQMPATLPADVQAQLR QQAVKAIDTQVVPAYAKLLDFIRNDYQPRARTTLAGEALPDGQAYYRAQIREFTTLDLSPDQIHQIGLQEVAKLRTQMDQ TIVASGFKPPAGQAVFPAFLHFLRTDPQFYAKTPEELLKQAAWIAKRVDAKVGDYIGRLPRRRFAIEPVPPELAPFYTGG RGGPGIYLVNTYNLPSRPLYNLTALTLHESSPGHALQMPLAAEAQGLPEFRRYGFISAYGEGWALYSEYLGQEMGMYDTP YDRFGYLTYQMWRACRLVIDTGIHHKGWTREQAQAYLRDNTALSEHEVTTEVDRYIAWPGQALSYYLGELKILELRRKAE AALGEKFDLRNFHDAVLQTGSVPLPVLEARIDRFIADGGVSPYPPDDQAEASAEAKASASD
Sequences:
>Translated_621_residues MSTTSALRASTLTLLIAACLGGLALPVHAAEAAAAATQNTAAARFKALYTREWRWRQAQASGAVDEDNQATQEQQADHLP KVDVATQNQRTAYWQQVLKELDAIPQAQLSAEDQVSYQVYRQQLQVLLDQQHFRAWEMPFNSDSAFWSDLGFSAEATLRT REDYQRYLKMLADIPRYFAEHTHNMRAGLARGFTQPRVTMTGRDQSIADVAQAKGEANPFYAPFKQMPATLPADVQAQLR QQAVKAIDTQVVPAYAKLLDFIRNDYQPRARTTLAGEALPDGQAYYRAQIREFTTLDLSPDQIHQIGLQEVAKLRTQMDQ TIVASGFKPPAGQAVFPAFLHFLRTDPQFYAKTPEELLKQAAWIAKRVDAKVGDYIGRLPRRRFAIEPVPPELAPFYTGG RGGPGIYLVNTYNLPSRPLYNLTALTLHESSPGHALQMPLAAEAQGLPEFRRYGFISAYGEGWALYSEYLGQEMGMYDTP YDRFGYLTYQMWRACRLVIDTGIHHKGWTREQAQAYLRDNTALSEHEVTTEVDRYIAWPGQALSYYLGELKILELRRKAE AALGEKFDLRNFHDAVLQTGSVPLPVLEARIDRFIADGGVSPYPPDDQAEASAEAKASASD >Mature_620_residues STTSALRASTLTLLIAACLGGLALPVHAAEAAAAATQNTAAARFKALYTREWRWRQAQASGAVDEDNQATQEQQADHLPK VDVATQNQRTAYWQQVLKELDAIPQAQLSAEDQVSYQVYRQQLQVLLDQQHFRAWEMPFNSDSAFWSDLGFSAEATLRTR EDYQRYLKMLADIPRYFAEHTHNMRAGLARGFTQPRVTMTGRDQSIADVAQAKGEANPFYAPFKQMPATLPADVQAQLRQ QAVKAIDTQVVPAYAKLLDFIRNDYQPRARTTLAGEALPDGQAYYRAQIREFTTLDLSPDQIHQIGLQEVAKLRTQMDQT IVASGFKPPAGQAVFPAFLHFLRTDPQFYAKTPEELLKQAAWIAKRVDAKVGDYIGRLPRRRFAIEPVPPELAPFYTGGR GGPGIYLVNTYNLPSRPLYNLTALTLHESSPGHALQMPLAAEAQGLPEFRRYGFISAYGEGWALYSEYLGQEMGMYDTPY DRFGYLTYQMWRACRLVIDTGIHHKGWTREQAQAYLRDNTALSEHEVTTEVDRYIAWPGQALSYYLGELKILELRRKAEA ALGEKFDLRNFHDAVLQTGSVPLPVLEARIDRFIADGGVSPYPPDDQAEASAEAKASASD
Specific function: Unknown
COG id: COG4805
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69625; Mature: 69494
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTSALRASTLTLLIAACLGGLALPVHAAEAAAAATQNTAAARFKALYTREWRWRQAQA CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGAVDEDNQATQEQQADHLPKVDVATQNQRTAYWQQVLKELDAIPQAQLSAEDQVSYQVY CCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHH RQQLQVLLDQQHFRAWEMPFNSDSAFWSDLGFSAEATLRTREDYQRYLKMLADIPRYFAE HHHHHHHHHHHHHHEECCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH HTHNMRAGLARGFTQPRVTMTGRDQSIADVAQAKGEANPFYAPFKQMPATLPADVQAQLR HHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHCCCCCCCCCCHHHCCCCCCHHHHHHHH QQAVKAIDTQVVPAYAKLLDFIRNDYQPRARTTLAGEALPDGQAYYRAQIREFTTLDLSP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHEECCCCH DQIHQIGLQEVAKLRTQMDQTIVASGFKPPAGQAVFPAFLHFLRTDPQFYAKTPEELLKQ HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHCCHHHHHHH AAWIAKRVDAKVGDYIGRLPRRRFAIEPVPPELAPFYTGGRGGPGIYLVNTYNLPSRPLY HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC NLTALTLHESSPGHALQMPLAAEAQGLPEFRRYGFISAYGEGWALYSEYLGQEMGMYDTP CEEEEEEECCCCCCEEECCCHHHHCCCHHHHHCCCCEECCCCHHHHHHHHHHHCCCCCCC YDRFGYLTYQMWRACRLVIDTGIHHKGWTREQAQAYLRDNTALSEHEVTTEVDRYIAWPG HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCH QALSYYLGELKILELRRKAEAALGEKFDLRNFHDAVLQTGSVPLPVLEARIDRFIADGGV HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC SPYPPDDQAEASAEAKASASD CCCCCCCCHHHHHHCCCCCCC >Mature Secondary Structure STTSALRASTLTLLIAACLGGLALPVHAAEAAAAATQNTAAARFKALYTREWRWRQAQA CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGAVDEDNQATQEQQADHLPKVDVATQNQRTAYWQQVLKELDAIPQAQLSAEDQVSYQVY CCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHH RQQLQVLLDQQHFRAWEMPFNSDSAFWSDLGFSAEATLRTREDYQRYLKMLADIPRYFAE HHHHHHHHHHHHHHEECCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH HTHNMRAGLARGFTQPRVTMTGRDQSIADVAQAKGEANPFYAPFKQMPATLPADVQAQLR HHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHCCCCCCCCCCHHHCCCCCCHHHHHHHH QQAVKAIDTQVVPAYAKLLDFIRNDYQPRARTTLAGEALPDGQAYYRAQIREFTTLDLSP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHEECCCCH DQIHQIGLQEVAKLRTQMDQTIVASGFKPPAGQAVFPAFLHFLRTDPQFYAKTPEELLKQ HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHCCHHHHHHH AAWIAKRVDAKVGDYIGRLPRRRFAIEPVPPELAPFYTGGRGGPGIYLVNTYNLPSRPLY HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC NLTALTLHESSPGHALQMPLAAEAQGLPEFRRYGFISAYGEGWALYSEYLGQEMGMYDTP CEEEEEEECCCCCCEEECCCHHHHCCCHHHHHCCCCEECCCCHHHHHHHHHHHCCCCCCC YDRFGYLTYQMWRACRLVIDTGIHHKGWTREQAQAYLRDNTALSEHEVTTEVDRYIAWPG HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCH QALSYYLGELKILELRRKAEAALGEKFDLRNFHDAVLQTGSVPLPVLEARIDRFIADGGV HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC SPYPPDDQAEASAEAKASASD CCCCCCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA