| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is yveA [H]
Identifier: 78048295
GI number: 78048295
Start: 3116123
End: 3117709
Strand: Reverse
Name: yveA [H]
Synonym: XCV2739
Alternate gene names: 78048295
Gene position: 3117709-3116123 (Counterclockwise)
Preceding gene: 78048296
Following gene: 78048294
Centisome position: 60.21
GC content: 64.46
Gene sequence:
>1587_bases ATGACCACACACGCTGCGACCACGCAAGGCAAGTTCCACAAGCGCCTCAGCCTCACCGACCTGACCTTTATCGGGCTGGG TTCGATCTTCGGTTCCGGGTGGTTGTTTTCGGCCAGCCACGTCTCATCGATCGCGGGGCCGGCCGGCATCGTGTCGTGGA TACTCGGCGGTATCGCGGTGCTGCTGCTTGGGCTGGTGTATTGCGAACTCGGCGCGGCATTGCCGCGCGCCGGCGGAGTG GTGCGCTACCCGGAGTATTCGCATGGCGCCTTGCTCGGTTCGTTGACCGGCTTCATCACCTTGATCGCATTCTCCAGCCT GATCGCGATCGAAGTGGAGGCGGCGCGGCAATACGCAGCGGCGTGGTTCCCGTGGTTGAGCCAGCCGCACAGCACCCATC CCAGCGTGGCGGGTTGGCTGGTGCAGTTGGCCTTGCTGGTGCTGTTCTTCGTACTCAACTATTTCAGCGTCAAGACCTTC GCGCTGGCCAACAACATCGTCAGCATCTTCAAGTTTCTGGTGCCGATCCTGGTGATCGTGCTGCTGATGCAGCACTTCGA TGCCGGCAATCTGAGCGTGCATGGGTTCGCGCCCTCTGGCATGGCCGGTGTGGAAGCAGCGATCTCGGCCGGCGGCATCA TCTTCGCGTATCTGGGGTTGACGCCGATCGTGTCGGTGGCCAGTGAGGTGCGCGACCCGCAGCGCAATATTCCGATTGCG CTGATCCTGTCGGTGGCGCTGTCCACGGTGATTTACGTGCTGCTGCAGCTGGCGTTCCTGGGCAGCATCCCGGCCGCGCA GCTCGCGCAAGGCTGGGCGTGCATCGACAAGGCCTTCTCGCTGCCGTATCACGACATCGCCCTGGCCTTGGGCATGGCGT GGCTGGCTGCGCTGGTGATCTGCGATGCGATGGTCTCGCCCAGCGGCACCGGCAACATCTACATGAATGCCACGCCGCGC GTGGTGTACGGCTGGGCGCGCAGTGGCGGGTTCTTGCCGGTGCTGACGCGGGTGGACCCGGCTTCGGGTATCCCGCGTCC GGCACTGTGGTTGAGCCTGGGGTTGTCGATCTTCTGGACGCTGCCGTTCCCCTCGTGGGAAACGCTGATCGGGGTGGTGT CGGCCGCCTTGGTGCTGAGCTATGCGGTGGCGCCGATCACGGTGGCGGCCCTGCGCCGCAGCGCGCCGGACTTGCCACGC CCATTTTTCGTGCGTGGCCTGCCGGTGATGGGGCCGCTGTCGTTCATGGTTGCGGCGTTGATCGTGTACTGGTCCACCTG GCCGACCTTGTCGTGGTTGCTCGGCTTGCAGGTGCTGGCGTTCGTGCTGTACGTGCTATTTCGCCTGCCTTTGCGCCAGG GCCGCGCGCGCCTGGTGCGGCAGGTACGCGCGTCGCTGTGGCTGATCGTGTTCTTCGTGCTGGTGATGCTGGTGTCGTGG GCGGGCACGTTCGGTGGACATGGCTGGATTGCGCATCCCTTCGATACGTTGAGCGTGGCGGTCATCGCGTTCTGCATCTA TCACTGGGGCGCACGCAGCGGTTTGCGCAGCGACGAGCTTGCGCTGGAGGAGGACGATGGTGAGTGA
Upstream 100 bases:
>100_bases AGGCATCGGCAGAGGCGAAGGCCTCTGCCAGCGACTGACACGTGCGCGCACGTGATGCTCTAATTGCAGTAACCGCGCTT TCCACACTTCGGGGCGACGT
Downstream 100 bases:
>100_bases TGCGCGCCGCCGCGCATTTGGTTTGCGTCGATGGTCTGCGCTGGCCGGGTACATGATGGTGTTGTCGGGTGCTGTGCAGG CTGCGCCCAGCGTTGCCGAT
Product: amino acid-polyamine-organocation superfamily protein
Products: D-glycine [Cytoplasm]; D-alanine [Cytoplasm]; Proton [Cytoplasm]; D-serine [Cytoplasm] [C]
Alternate protein names: L-aspartate transporter [H]
Number of amino acids: Translated: 528; Mature: 527
Protein sequence:
>528_residues MTTHAATTQGKFHKRLSLTDLTFIGLGSIFGSGWLFSASHVSSIAGPAGIVSWILGGIAVLLLGLVYCELGAALPRAGGV VRYPEYSHGALLGSLTGFITLIAFSSLIAIEVEAARQYAAAWFPWLSQPHSTHPSVAGWLVQLALLVLFFVLNYFSVKTF ALANNIVSIFKFLVPILVIVLLMQHFDAGNLSVHGFAPSGMAGVEAAISAGGIIFAYLGLTPIVSVASEVRDPQRNIPIA LILSVALSTVIYVLLQLAFLGSIPAAQLAQGWACIDKAFSLPYHDIALALGMAWLAALVICDAMVSPSGTGNIYMNATPR VVYGWARSGGFLPVLTRVDPASGIPRPALWLSLGLSIFWTLPFPSWETLIGVVSAALVLSYAVAPITVAALRRSAPDLPR PFFVRGLPVMGPLSFMVAALIVYWSTWPTLSWLLGLQVLAFVLYVLFRLPLRQGRARLVRQVRASLWLIVFFVLVMLVSW AGTFGGHGWIAHPFDTLSVAVIAFCIYHWGARSGLRSDELALEEDDGE
Sequences:
>Translated_528_residues MTTHAATTQGKFHKRLSLTDLTFIGLGSIFGSGWLFSASHVSSIAGPAGIVSWILGGIAVLLLGLVYCELGAALPRAGGV VRYPEYSHGALLGSLTGFITLIAFSSLIAIEVEAARQYAAAWFPWLSQPHSTHPSVAGWLVQLALLVLFFVLNYFSVKTF ALANNIVSIFKFLVPILVIVLLMQHFDAGNLSVHGFAPSGMAGVEAAISAGGIIFAYLGLTPIVSVASEVRDPQRNIPIA LILSVALSTVIYVLLQLAFLGSIPAAQLAQGWACIDKAFSLPYHDIALALGMAWLAALVICDAMVSPSGTGNIYMNATPR VVYGWARSGGFLPVLTRVDPASGIPRPALWLSLGLSIFWTLPFPSWETLIGVVSAALVLSYAVAPITVAALRRSAPDLPR PFFVRGLPVMGPLSFMVAALIVYWSTWPTLSWLLGLQVLAFVLYVLFRLPLRQGRARLVRQVRASLWLIVFFVLVMLVSW AGTFGGHGWIAHPFDTLSVAVIAFCIYHWGARSGLRSDELALEEDDGE >Mature_527_residues TTHAATTQGKFHKRLSLTDLTFIGLGSIFGSGWLFSASHVSSIAGPAGIVSWILGGIAVLLLGLVYCELGAALPRAGGVV RYPEYSHGALLGSLTGFITLIAFSSLIAIEVEAARQYAAAWFPWLSQPHSTHPSVAGWLVQLALLVLFFVLNYFSVKTFA LANNIVSIFKFLVPILVIVLLMQHFDAGNLSVHGFAPSGMAGVEAAISAGGIIFAYLGLTPIVSVASEVRDPQRNIPIAL ILSVALSTVIYVLLQLAFLGSIPAAQLAQGWACIDKAFSLPYHDIALALGMAWLAALVICDAMVSPSGTGNIYMNATPRV VYGWARSGGFLPVLTRVDPASGIPRPALWLSLGLSIFWTLPFPSWETLIGVVSAALVLSYAVAPITVAALRRSAPDLPRP FFVRGLPVMGPLSFMVAALIVYWSTWPTLSWLLGLQVLAFVLYVLFRLPLRQGRARLVRQVRASLWLIVFFVLVMLVSWA GTFGGHGWIAHPFDTLSVAVIAFCIYHWGARSGLRSDELALEEDDGE
Specific function: Uptake of L-aspartate with the concomitant import of a proton. Can also transport aspartate hydroxamate and L-glutamate with lower affinity and efficiency [H]
COG id: COG0531
COG function: function code E; Amino acid transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. AGT (TC 2.A.3.11) family [H]
Homologues:
Organism=Homo sapiens, GI187423910, Length=437, Percent_Identity=24.4851258581236, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI7657591, Length=437, Percent_Identity=24.4851258581236, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI4507047, Length=435, Percent_Identity=23.6781609195402, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI33286428, Length=404, Percent_Identity=25.4950495049505, Blast_Score=80, Evalue=4e-15, Organism=Homo sapiens, GI186910308, Length=421, Percent_Identity=24.2280285035629, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI186910306, Length=421, Percent_Identity=24.2280285035629, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI186910304, Length=421, Percent_Identity=24.2280285035629, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI110347453, Length=359, Percent_Identity=25.3481894150418, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI258614005, Length=434, Percent_Identity=22.8110599078341, Blast_Score=76, Evalue=6e-14, Organism=Homo sapiens, GI258614003, Length=434, Percent_Identity=22.1198156682028, Blast_Score=76, Evalue=9e-14, Organism=Homo sapiens, GI71979932, Length=428, Percent_Identity=24.7663551401869, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI258645169, Length=380, Percent_Identity=22.6315789473684, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI115648063, Length=424, Percent_Identity=21.9339622641509, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI115648022, Length=424, Percent_Identity=21.9339622641509, Blast_Score=70, Evalue=5e-12, Organism=Escherichia coli, GI1790653, Length=384, Percent_Identity=23.9583333333333, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1788480, Length=361, Percent_Identity=24.9307479224377, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1786789, Length=415, Percent_Identity=24.0963855421687, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1786602, Length=351, Percent_Identity=25.3561253561254, Blast_Score=66, Evalue=4e-12, Organism=Escherichia coli, GI2367353, Length=345, Percent_Identity=26.0869565217391, Blast_Score=65, Evalue=2e-11, Organism=Escherichia coli, GI87081915, Length=402, Percent_Identity=21.1442786069652, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1786302, Length=401, Percent_Identity=22.1945137157107, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI87082250, Length=358, Percent_Identity=24.8603351955307, Blast_Score=63, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17540018, Length=426, Percent_Identity=25.1173708920188, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17532491, Length=415, Percent_Identity=26.5060240963855, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17531343, Length=454, Percent_Identity=25.9911894273128, Blast_Score=82, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17568033, Length=415, Percent_Identity=24.578313253012, Blast_Score=72, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17533459, Length=413, Percent_Identity=23.728813559322, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI24667468, Length=405, Percent_Identity=25.679012345679, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI24651635, Length=413, Percent_Identity=24.2130750605327, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI24651633, Length=413, Percent_Identity=24.2130750605327, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI221512776, Length=427, Percent_Identity=22.7166276346604, Blast_Score=80, Evalue=4e-15, Organism=Drosophila melanogaster, GI24666159, Length=427, Percent_Identity=22.7166276346604, Blast_Score=80, Evalue=4e-15, Organism=Drosophila melanogaster, GI45550968, Length=418, Percent_Identity=25.3588516746411, Blast_Score=80, Evalue=5e-15, Organism=Drosophila melanogaster, GI19921172, Length=418, Percent_Identity=25.3588516746411, Blast_Score=80, Evalue=5e-15, Organism=Drosophila melanogaster, GI21357367, Length=419, Percent_Identity=24.1050119331742, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI221331183, Length=367, Percent_Identity=25.0681198910082, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI17647653, Length=367, Percent_Identity=25.0681198910082, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI24664379, Length=367, Percent_Identity=25.0681198910082, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI24641995, Length=397, Percent_Identity=24.6851385390428, Blast_Score=73, Evalue=6e-13, Organism=Drosophila melanogaster, GI24641993, Length=397, Percent_Identity=24.6851385390428, Blast_Score=73, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 56742; Mature: 56610
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTHAATTQGKFHKRLSLTDLTFIGLGSIFGSGWLFSASHVSSIAGPAGIVSWILGGIAV CCCCCCCCCCHHHHHHCHHHHHHHHHHHHHCCCCEEEHHHHHHHCCHHHHHHHHHHHHHH LLLGLVYCELGAALPRAGGVVRYPEYSHGALLGSLTGFITLIAFSSLIAIEVEAARQYAA HHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWFPWLSQPHSTHPSVAGWLVQLALLVLFFVLNYFSVKTFALANNIVSIFKFLVPILVIV HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLMQHFDAGNLSVHGFAPSGMAGVEAAISAGGIIFAYLGLTPIVSVASEVRDPQRNIPIA HHHHHCCCCCEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHH LILSVALSTVIYVLLQLAFLGSIPAAQLAQGWACIDKAFSLPYHDIALALGMAWLAALVI HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH CDAMVSPSGTGNIYMNATPRVVYGWARSGGFLPVLTRVDPASGIPRPALWLSLGLSIFWT HHHHCCCCCCCCEEEECCCCEEEEECCCCCCEEEEECCCCCCCCCCHHHHHHHCCHHEEE LPFPSWETLIGVVSAALVLSYAVAPITVAALRRSAPDLPRPFFVRGLPVMGPLSFMVAAL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHH IVYWSTWPTLSWLLGLQVLAFVLYVLFRLPLRQGRARLVRQVRASLWLIVFFVLVMLVSW HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGTFGGHGWIAHPFDTLSVAVIAFCIYHWGARSGLRSDELALEEDDGE HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure TTHAATTQGKFHKRLSLTDLTFIGLGSIFGSGWLFSASHVSSIAGPAGIVSWILGGIAV CCCCCCCCCHHHHHHCHHHHHHHHHHHHHCCCCEEEHHHHHHHCCHHHHHHHHHHHHHH LLLGLVYCELGAALPRAGGVVRYPEYSHGALLGSLTGFITLIAFSSLIAIEVEAARQYAA HHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWFPWLSQPHSTHPSVAGWLVQLALLVLFFVLNYFSVKTFALANNIVSIFKFLVPILVIV HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLMQHFDAGNLSVHGFAPSGMAGVEAAISAGGIIFAYLGLTPIVSVASEVRDPQRNIPIA HHHHHCCCCCEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHH LILSVALSTVIYVLLQLAFLGSIPAAQLAQGWACIDKAFSLPYHDIALALGMAWLAALVI HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH CDAMVSPSGTGNIYMNATPRVVYGWARSGGFLPVLTRVDPASGIPRPALWLSLGLSIFWT HHHHCCCCCCCCEEEECCCCEEEEECCCCCCEEEEECCCCCCCCCCHHHHHHHCCHHEEE LPFPSWETLIGVVSAALVLSYAVAPITVAALRRSAPDLPRPFFVRGLPVMGPLSFMVAAL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHH IVYWSTWPTLSWLLGLQVLAFVLYVLFRLPLRQGRARLVRQVRASLWLIVFFVLVMLVSW HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGTFGGHGWIAHPFDTLSVAVIAFCIYHWGARSGLRSDELALEEDDGE HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: D-glycine [Periplasm]; D-alanine [Periplasm]; Proton [Periplasm]; D-serine [Periplasm] [C]
Specific reaction: Proton [Periplasm] + D-glycine [Periplasm] = Proton [Cytoplasm] + D-glycine [Cytoplasm] Proton [Periplasm] + D-alanine [Periplasm] = Proton [Cytoplasm] + D-alanine [Cytoplasm] Proton [Periplasm] + D-serine [Periplasm] = Proton [Cytoplasm] + D-serine [Cyto
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377; 12730183 [H]