| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78048294
Identifier: 78048294
GI number: 78048294
Start: 3115039
End: 3116133
Strand: Reverse
Name: 78048294
Synonym: XCV2738
Alternate gene names: NA
Gene position: 3116133-3115039 (Counterclockwise)
Preceding gene: 78048295
Following gene: 78048293
Centisome position: 60.17
GC content: 66.3
Gene sequence:
>1095_bases ATGGTGAGTGATGCGCGCCGCCGCGCATTTGGTTTGCGTCGATGGTCTGCGCTGGCCGGGTACATGATGGTGTTGTCGGG TGCTGTGCAGGCTGCGCCCAGCGTTGCCGATTACCAACGTTCGCTGGGTTTGCGCGAGCAGTGGATCACGCTGACGGAGA ATGTCGCCTGGCCGGCGCAATGGCAGGACAATGGAAGGTTCTATTACCGCAAGACGGTGCCGGGCGGCTTTGCGTTTGTC AGTGCCGATGTGGCCACCTTGCAGAAGCAGCCGGCCTTCGATCAGGCACGCGTGGCGCAGGGCCTGAGTGCGGCAACCGG CAAGCCCTATGCGGCGCTGCGTCTGCCGTTCGAGCAGTTTTCGTTTTCAACCGAGGGCGAACGCAGCGATGGCGCCATTG TTTTCGCACTGGACGATGCGCCCTGGCGTTGCACGCTGACCACCTACCACTGCGCGCCCGATGCTCGGCTGCAGGCCACT TCACGCCCACGCGGTTTCGGCGTGGTGCGCGACCCGCTGGTGCCGGCCGACACCACGCCGCGTCGCTCGCCGGATGCCAG GTGGGAGGTGTTGGCCGATGGTTGGAACCTGGTGTTGCGCCGTGTCGCCGACGGGCAGGTCACCCGGCTCAGCAGTGACG GCCGTGCCGATGACTATTTCGATCTGGAGAGTGTTGCCTGGTCGCCGGATTCGCGGCAGCTGGCGGTGTATCGCGTGCGT CCGGGGCTGGCTCGCCGTGTCACCCGCGTCGAAGCCGCGCCTGCCGGCGGTGGGCAACCGGTGGTGCACACCCAGTTGTA TCCCAAGCCGGGCGATGCGGTGGATGTGGAACGGCCGGTGCTGTTCTCCCTGGACGGAACACGTCGCGACGTGGACACGG CGTTGTTCGACAACCCGTATTCGTTGTCGCCGCTGCAGTGGCGCAGCGACGGGCGCAGTGTCGCGTTCGACTATGTGCAA CGCGGCTTCCAGCGCATGCGCGTGATTGCGGTGGATGCACGCAGCGGGCGCGCGCGTGGCAGTCGGCGAAGACGCCCGCA CCTTCGTGTATGCCGACCGCAGCTTTCGCCACGACGTAGACGCGCGTGGCGATGA
Upstream 100 bases:
>100_bases CCCTTCGATACGTTGAGCGTGGCGGTCATCGCGTTCTGCATCTATCACTGGGGCGCACGCAGCGGTTTGCGCAGCGACGA GCTTGCGCTGGAGGAGGACG
Downstream 100 bases:
>100_bases GGTGCTGTGGATCTCCGAGCGCGATGGCTGGCGGCACCTGTATCTGTTCGATGGACGCAGCGGCAAGGTGAAGCGCCAGC TCACCCGCGGGCCGTGGGTG
Product: putative peptidase (fragment)
Products: NA
Alternate protein names: Peptidase S9b Dipeptidylpeptidase Iv Domain Protein; Dipeptidyl Peptidase; Dipeptidyl-Peptidase IV; Peptidase S9 Prolyl Oligopeptidase; Xaa-Pro Dipeptidyl-Peptidase; Dipeptidyl Peptidase Iv Transmembrane Protein; Peptidase S9B; Dipeptidyl-Peptidase; Peptidase S9B Dipeptidylpeptidase IV Subunit; Peptidase S9a Prolyl Oligopeptidase Transmembrane Protein; Prolyl Oligopeptidase Family
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MVSDARRRAFGLRRWSALAGYMMVLSGAVQAAPSVADYQRSLGLREQWITLTENVAWPAQWQDNGRFYYRKTVPGGFAFV SADVATLQKQPAFDQARVAQGLSAATGKPYAALRLPFEQFSFSTEGERSDGAIVFALDDAPWRCTLTTYHCAPDARLQAT SRPRGFGVVRDPLVPADTTPRRSPDARWEVLADGWNLVLRRVADGQVTRLSSDGRADDYFDLESVAWSPDSRQLAVYRVR PGLARRVTRVEAAPAGGGQPVVHTQLYPKPGDAVDVERPVLFSLDGTRRDVDTALFDNPYSLSPLQWRSDGRSVAFDYVQ RGFQRMRVIAVDARSGRARGSRRRRPHLRVCRPQLSPRRRRAWR
Sequences:
>Translated_364_residues MVSDARRRAFGLRRWSALAGYMMVLSGAVQAAPSVADYQRSLGLREQWITLTENVAWPAQWQDNGRFYYRKTVPGGFAFV SADVATLQKQPAFDQARVAQGLSAATGKPYAALRLPFEQFSFSTEGERSDGAIVFALDDAPWRCTLTTYHCAPDARLQAT SRPRGFGVVRDPLVPADTTPRRSPDARWEVLADGWNLVLRRVADGQVTRLSSDGRADDYFDLESVAWSPDSRQLAVYRVR PGLARRVTRVEAAPAGGGQPVVHTQLYPKPGDAVDVERPVLFSLDGTRRDVDTALFDNPYSLSPLQWRSDGRSVAFDYVQ RGFQRMRVIAVDARSGRARGSRRRRPHLRVCRPQLSPRRRRAWR >Mature_364_residues MVSDARRRAFGLRRWSALAGYMMVLSGAVQAAPSVADYQRSLGLREQWITLTENVAWPAQWQDNGRFYYRKTVPGGFAFV SADVATLQKQPAFDQARVAQGLSAATGKPYAALRLPFEQFSFSTEGERSDGAIVFALDDAPWRCTLTTYHCAPDARLQAT SRPRGFGVVRDPLVPADTTPRRSPDARWEVLADGWNLVLRRVADGQVTRLSSDGRADDYFDLESVAWSPDSRQLAVYRVR PGLARRVTRVEAAPAGGGQPVVHTQLYPKPGDAVDVERPVLFSLDGTRRDVDTALFDNPYSLSPLQWRSDGRSVAFDYVQ RGFQRMRVIAVDARSGRARGSRRRRPHLRVCRPQLSPRRRRAWR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40866; Mature: 40866
Theoretical pI: Translated: 11.14; Mature: 11.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSDARRRAFGLRRWSALAGYMMVLSGAVQAAPSVADYQRSLGLREQWITLTENVAWPAQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHEEEEECCCCCCCE WQDNGRFYYRKTVPGGFAFVSADVATLQKQPAFDQARVAQGLSAATGKPYAALRLPFEQF ECCCCEEEEEEECCCCEEEEEHHHHHHHCCCCCCHHHHHHCCHHCCCCCEEEEECCHHHH SFSTEGERSDGAIVFALDDAPWRCTLTTYHCAPDARLQATSRPRGFGVVRDPLVPADTTP CCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCEEECCCCCCCCEECCCCCCCCCCC RRSPDARWEVLADGWNLVLRRVADGQVTRLSSDGRADDYFDLESVAWSPDSRQLAVYRVR CCCCCCCEEEECCCHHHHHHHHCCCCEEEECCCCCCCCCCCHHHEECCCCCCCEEEEEEC PGLARRVTRVEAAPAGGGQPVVHTQLYPKPGDAVDVERPVLFSLDGTRRDVDTALFDNPY CCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCHHHHHHCCCCC SLSPLQWRSDGRSVAFDYVQRGFQRMRVIAVDARSGRARGSRRRRPHLRVCRPQLSPRRR CCCCEEECCCCCEEHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCEEECCCCCHHHH RAWR CCCC >Mature Secondary Structure MVSDARRRAFGLRRWSALAGYMMVLSGAVQAAPSVADYQRSLGLREQWITLTENVAWPAQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHEEEEECCCCCCCE WQDNGRFYYRKTVPGGFAFVSADVATLQKQPAFDQARVAQGLSAATGKPYAALRLPFEQF ECCCCEEEEEEECCCCEEEEEHHHHHHHCCCCCCHHHHHHCCHHCCCCCEEEEECCHHHH SFSTEGERSDGAIVFALDDAPWRCTLTTYHCAPDARLQATSRPRGFGVVRDPLVPADTTP CCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCEEECCCCCCCCEECCCCCCCCCCC RRSPDARWEVLADGWNLVLRRVADGQVTRLSSDGRADDYFDLESVAWSPDSRQLAVYRVR CCCCCCCEEEECCCHHHHHHHHCCCCEEEECCCCCCCCCCCHHHEECCCCCCCEEEEEEC PGLARRVTRVEAAPAGGGQPVVHTQLYPKPGDAVDVERPVLFSLDGTRRDVDTALFDNPY CCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCHHHHHHCCCCC SLSPLQWRSDGRSVAFDYVQRGFQRMRVIAVDARSGRARGSRRRRPHLRVCRPQLSPRRR CCCCEEECCCCCEEHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCEEECCCCCHHHH RAWR CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA