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The map label for this gene is cirA [C]

Identifier: 78048258

GI number: 78048258

Start: 3060080

End: 3062638

Strand: Reverse

Name: cirA [C]

Synonym: XCV2702

Alternate gene names: 78048258

Gene position: 3062638-3060080 (Counterclockwise)

Preceding gene: 78048260

Following gene: 78048257

Centisome position: 59.14

GC content: 63.23

Gene sequence:

>2559_bases
GTGTTGAACAAGACTCCGCTCTGCCTGGCGATCACGCTGACGTTGGCTGCGGCCACGTGGAGTCCGCTGGCGCACGCGGC
CCAGGGTGCGGCCACGGGCGGCGCTGCCAGCGCTGCGGCAATCGACCTGGAGCGGCTGGAGGTGCGCCCGCAGCTGGAAG
CGCAGGAGCGCGCAGTCGATCTCAAACGCGCCTCCGATGCCATCCAGGACGCCGTCGCCTCCGATGCGATGGGACGTTAC
CCGGACAAGAATGTTGCAGAATCCTTGCAGCGCCTGCCCGGCGTCAGCGTGACGCGCGACCAGGGCGAAGGCCGCTTTGT
GGTCATCCGCGGACTGGATTCGTCGCTCAACAGCGTCACTATCGACGGCATGACCATGGGCACGCCGGAAGACGGCACGC
GTTCGGCACCGCTGGACGTGATTCCTTCCGATTCCACCGAGCGCCTGAAGGTGGTCAAGTCGCCGACCCCGGACATGCCG
GGCGATTCCATCGGCGGCGCGATCCAGGTGGAATCCACCTCCGCCTTCGATCGCGACGGACGCACCTTGCGCGGCTCCAT
CGAAGCCAGCCACCAGTCGCTGTCGGGCAAGACCAGCCCGAAGGGCGCCTTCAACTACAGCGACATCTTCAATGGCACCT
TCGGGGTGGCCGTGGGCGTGAACTATCAGGACCGCGAGTTCGAATCGGACAATACCGAAGTGGCCTACGACACCTTTGAC
GGTGGCGCGGACGACGATCTGTTCGCCGGCGAAGTGCAACGCCGCAAATACTTCATCGAACGCACCCGCATGGGCGCGAA
CCTCAATCTGGACTGGCGCCCGGACGCGGATAACCGCTACTACCTGCGCACGCTCTACAGCCGTTTCGACGATGCCGAAA
CGCGTCAGCGCACCATCTTCGGGTTGAGCGATGGCGAGGTCAGTGCCAATGGCGACGGCACCTATCGCGTGGACGACCTG
CCGGCCGACAGCATTTCCAAGCGCGTGCGCTACCGCACCAAGAAGGAAGACACCATGGCGTTGAGCGTGGGTGGCGAAAA
CCGCCTGAGCGCCGCCACCGTGGATTACAAGCTGGGCTACACCAAGACCCGCGAGCGCGTGAACGATGAAAAGGAAGCGC
GCTTCAATTACGACGGCGACGATCTGGCGGCCACGGTGGATCAGCGCAGTGGCATTCCGAAGCTGGGCTTCTCCGACAAC
GGCTGGCAGAGCAACGATGATTTCGTGTTCGATCGCTTCGTGATTGCGCCCACGCAGGTGGACGACAGCGAGCGCAGCGC
GCAGATCAATGTGCGCTTTGACGGCGAGCATTCCAGCCTGAAGATGGGCGTGCTGGGCCGCTGGCGCGAGCGCGGGGTGA
ACGTGGACGAAAACGAGCTGCGTCGTGGGCCGGCCATCGACCTGAGCGACTGGACCACTCCCGCGCCCGAGCACCGTGGC
GGCACCTTGGGCCAGAGCATCGGCTCGGACGGCATGCGCCGTTACTGGAACACCTCCGGCGATCTGTACAGTGCACGCCC
GCAGGATGTGGGCGGCAATCTGCAGACCTCGCTGCAGGACGATTACACGGCCACCGAAGATGTCTTCGCCACCTATGCGA
TGGGCACCTGGGACATCGGCGCACTGCGCATGATCGCCGGCGTGCGCGTGGAAAATACCCAGTTCGATGCCACCGGCAAC
CAGGTAGACGTGGCAGCCAATGGCCGCACCGCCACGGTGACGCCACGCGAGGCTTCCAGCAGCTACACCAACGTGCTGCC
CGGCCTGCATCTGCGTTACGACAGTGGCAACGACTGGGTGCTGCGCTTTGCGGCCAACAAGACCTTGTCGCGCCCGGCGT
TCGGCGATGTGTCGCCACGCGTGAGCATCAACCGTGGCGATAACGAGGTGAGTCTGGGCAACCCCGATCTCGATCCGTAC
CGTTCGCAGAACCTGGACCTGTCGTTCGAAAAATACCTCGGCAGTACCGGCGTGATCTCGCTGGGCGTGTTCCACAAGTC
GATCGACGACTACATCGTGCAGACCATCAACACCAACGATGCGGAATTTCCGGGCCTGCAGGTCACACGCTCGATCAATG
GCGACACCGCAAAGGTGCGCGGCGCGGAATTCAATTGGCAGCAGACCCTGGACTTCCTGCCCGAGGGCTGGAATGGCTTT
CTGGTTGGTGCCAGCGCCACGCTGCTGGACAGCGATTTCAATCCGGGTCTGGAAAATCGTGCCGGCGACGACTTCACCCT
GCCGCGTTCGTCCAAGCGCATCTACAGCGGCCACCTGGGCTACGAAAAATACGGGTTCAGTGCGCGCGTGGCGGCGGTGT
ATCGCAGCCAATATCTGGACACCATCGGGCAGAGCCGTGCGTACGATATCTACGTTGCCCCACACACGCAGCTGGATTTC
AGCATGAACTATCAATTCAACAGCCACGTCAGCCTGTATCTGGAAGCGCAGAACCTGTTGGACGAGCCGTTGGAGCTGTA
TCAGGGCATCCGCTCGCGCACCCTGCAAAATGAAGAGTACGGCCGCACCTACGCGCTTGGCCTGAAGGTGGCGCTGTGA

Upstream 100 bases:

>100_bases
TCGCCACACTTCGGGTGTGATCGCTGATGCATATGTCATGTCAGTGAAACGTCGTAGACATAGTGTGCCCACCCATTCTT
AACCGATTGGGGAAGCACCC

Downstream 100 bases:

>100_bases
TCGCACCACGCACCTTCGTGCAGATCACGCTGCTGTCCGCTGCCGCCGCATTGGTCGGTTGCGCCAGTGCCCCGGCCGGC
CGCGAAGCCGACGAAGCGCT

Product: TonB-dependent outer membrane receptor

Products: NA

Alternate protein names: NB-Dependent Receptor Subfamily; Nb-Dependent Receptor; NB-Dependent Outer Membrane Receptor; NB-Dependent Receptor Plug; Nb-Dependent Outer Membrane Receptor Protein; Outer Membrane Protein; NB-Dependent Outer Membrane Receptor Protein; Outer Membrane Insertion C-Terminal Signal; NB Dependent Receptor; NB-Dependent Receptor Protein; NB-Dependent Receptor Subfamily Protein; NB Dependent Receptor-Related Protein; NB Dependent Receptor Protein; NB-Dependent Receptor Domain Protein; Crossover Junction Endodeoxyribonuclease RuvC; NB-Dependent Outer Membrane Fe Receptor Protein; NB-Dependent Maltose Outer Membrane Transporter MalA; NB-Dependent Receptor-Like Protein; NB Dependent Receptor For Iron Chelates; NB-Dependent Outer Membrane Ferripyoverdine Receptor; Ferrienterochelin/Colicin Outer Membrane Receptor; Exported nB-Dependent Receptor; Nucleoside Diphosphate Kinase; Peptidase; Outer Membrane Receptor Family Protein; 1-(5-Phosphoribosyl)-5-; Argininosuccinate Synthase

Number of amino acids: Translated: 852; Mature: 852

Protein sequence:

>852_residues
MLNKTPLCLAITLTLAAATWSPLAHAAQGAATGGAASAAAIDLERLEVRPQLEAQERAVDLKRASDAIQDAVASDAMGRY
PDKNVAESLQRLPGVSVTRDQGEGRFVVIRGLDSSLNSVTIDGMTMGTPEDGTRSAPLDVIPSDSTERLKVVKSPTPDMP
GDSIGGAIQVESTSAFDRDGRTLRGSIEASHQSLSGKTSPKGAFNYSDIFNGTFGVAVGVNYQDREFESDNTEVAYDTFD
GGADDDLFAGEVQRRKYFIERTRMGANLNLDWRPDADNRYYLRTLYSRFDDAETRQRTIFGLSDGEVSANGDGTYRVDDL
PADSISKRVRYRTKKEDTMALSVGGENRLSAATVDYKLGYTKTRERVNDEKEARFNYDGDDLAATVDQRSGIPKLGFSDN
GWQSNDDFVFDRFVIAPTQVDDSERSAQINVRFDGEHSSLKMGVLGRWRERGVNVDENELRRGPAIDLSDWTTPAPEHRG
GTLGQSIGSDGMRRYWNTSGDLYSARPQDVGGNLQTSLQDDYTATEDVFATYAMGTWDIGALRMIAGVRVENTQFDATGN
QVDVAANGRTATVTPREASSSYTNVLPGLHLRYDSGNDWVLRFAANKTLSRPAFGDVSPRVSINRGDNEVSLGNPDLDPY
RSQNLDLSFEKYLGSTGVISLGVFHKSIDDYIVQTINTNDAEFPGLQVTRSINGDTAKVRGAEFNWQQTLDFLPEGWNGF
LVGASATLLDSDFNPGLENRAGDDFTLPRSSKRIYSGHLGYEKYGFSARVAAVYRSQYLDTIGQSRAYDIYVAPHTQLDF
SMNYQFNSHVSLYLEAQNLLDEPLELYQGIRSRTLQNEEYGRTYALGLKVAL

Sequences:

>Translated_852_residues
MLNKTPLCLAITLTLAAATWSPLAHAAQGAATGGAASAAAIDLERLEVRPQLEAQERAVDLKRASDAIQDAVASDAMGRY
PDKNVAESLQRLPGVSVTRDQGEGRFVVIRGLDSSLNSVTIDGMTMGTPEDGTRSAPLDVIPSDSTERLKVVKSPTPDMP
GDSIGGAIQVESTSAFDRDGRTLRGSIEASHQSLSGKTSPKGAFNYSDIFNGTFGVAVGVNYQDREFESDNTEVAYDTFD
GGADDDLFAGEVQRRKYFIERTRMGANLNLDWRPDADNRYYLRTLYSRFDDAETRQRTIFGLSDGEVSANGDGTYRVDDL
PADSISKRVRYRTKKEDTMALSVGGENRLSAATVDYKLGYTKTRERVNDEKEARFNYDGDDLAATVDQRSGIPKLGFSDN
GWQSNDDFVFDRFVIAPTQVDDSERSAQINVRFDGEHSSLKMGVLGRWRERGVNVDENELRRGPAIDLSDWTTPAPEHRG
GTLGQSIGSDGMRRYWNTSGDLYSARPQDVGGNLQTSLQDDYTATEDVFATYAMGTWDIGALRMIAGVRVENTQFDATGN
QVDVAANGRTATVTPREASSSYTNVLPGLHLRYDSGNDWVLRFAANKTLSRPAFGDVSPRVSINRGDNEVSLGNPDLDPY
RSQNLDLSFEKYLGSTGVISLGVFHKSIDDYIVQTINTNDAEFPGLQVTRSINGDTAKVRGAEFNWQQTLDFLPEGWNGF
LVGASATLLDSDFNPGLENRAGDDFTLPRSSKRIYSGHLGYEKYGFSARVAAVYRSQYLDTIGQSRAYDIYVAPHTQLDF
SMNYQFNSHVSLYLEAQNLLDEPLELYQGIRSRTLQNEEYGRTYALGLKVAL
>Mature_852_residues
MLNKTPLCLAITLTLAAATWSPLAHAAQGAATGGAASAAAIDLERLEVRPQLEAQERAVDLKRASDAIQDAVASDAMGRY
PDKNVAESLQRLPGVSVTRDQGEGRFVVIRGLDSSLNSVTIDGMTMGTPEDGTRSAPLDVIPSDSTERLKVVKSPTPDMP
GDSIGGAIQVESTSAFDRDGRTLRGSIEASHQSLSGKTSPKGAFNYSDIFNGTFGVAVGVNYQDREFESDNTEVAYDTFD
GGADDDLFAGEVQRRKYFIERTRMGANLNLDWRPDADNRYYLRTLYSRFDDAETRQRTIFGLSDGEVSANGDGTYRVDDL
PADSISKRVRYRTKKEDTMALSVGGENRLSAATVDYKLGYTKTRERVNDEKEARFNYDGDDLAATVDQRSGIPKLGFSDN
GWQSNDDFVFDRFVIAPTQVDDSERSAQINVRFDGEHSSLKMGVLGRWRERGVNVDENELRRGPAIDLSDWTTPAPEHRG
GTLGQSIGSDGMRRYWNTSGDLYSARPQDVGGNLQTSLQDDYTATEDVFATYAMGTWDIGALRMIAGVRVENTQFDATGN
QVDVAANGRTATVTPREASSSYTNVLPGLHLRYDSGNDWVLRFAANKTLSRPAFGDVSPRVSINRGDNEVSLGNPDLDPY
RSQNLDLSFEKYLGSTGVISLGVFHKSIDDYIVQTINTNDAEFPGLQVTRSINGDTAKVRGAEFNWQQTLDFLPEGWNGF
LVGASATLLDSDFNPGLENRAGDDFTLPRSSKRIYSGHLGYEKYGFSARVAAVYRSQYLDTIGQSRAYDIYVAPHTQLDF
SMNYQFNSHVSLYLEAQNLLDEPLELYQGIRSRTLQNEEYGRTYALGLKVAL

Specific function: Not Yet Known. Postulated To Participate In Iron Transport. Outer Membrane Receptor For Colicins Ia And Ib. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788478, Length=265, Percent_Identity=24.1509433962264, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 93757; Mature: 93757

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNKTPLCLAITLTLAAATWSPLAHAAQGAATGGAASAAAIDLERLEVRPQLEAQERAVD
CCCCCCCCEEEEEHHHHHHCCHHHHHHCCCCCCCCCHHHEEEHHHHCCCCCCCHHHHHHH
LKRASDAIQDAVASDAMGRYPDKNVAESLQRLPGVSVTRDQGEGRFVVIRGLDSSLNSVT
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCCCEEE
IDGMTMGTPEDGTRSAPLDVIPSDSTERLKVVKSPTPDMPGDSIGGAIQVESTSAFDRDG
ECCEEECCCCCCCCCCCCEECCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCC
RTLRGSIEASHQSLSGKTSPKGAFNYSDIFNGTFGVAVGVNYQDREFESDNTEVAYDTFD
CEEEECHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEECCC
GGADDDLFAGEVQRRKYFIERTRMGANLNLDWRPDADNRYYLRTLYSRFDDAETRQRTIF
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHCCCCCCCCEEEE
GLSDGEVSANGDGTYRVDDLPADSISKRVRYRTKKEDTMALSVGGENRLSAATVDYKLGY
EECCCEEECCCCCCEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEEECCC
TKTRERVNDEKEARFNYDGDDLAATVDQRSGIPKLGFSDNGWQSNDDFVFDRFVIAPTQV
HHHHHHCCCCHHHCCCCCCHHHEEEHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCC
DDSERSAQINVRFDGEHSSLKMGVLGRWRERGVNVDENELRRGPAIDLSDWTTPAPEHRG
CCCCCCEEEEEEECCCCCCEEECHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCC
GTLGQSIGSDGMRRYWNTSGDLYSARPQDVGGNLQTSLQDDYTATEDVFATYAMGTWDIG
CCHHHHHCCHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHEEEECCCCCHH
ALRMIAGVRVENTQFDATGNQVDVAANGRTATVTPREASSSYTNVLPGLHLRYDSGNDWV
HHHHHHCEEEECCEECCCCCEEEEEECCEEEEECCCCCCCCHHHCCCCEEEEECCCCCEE
LRFAANKTLSRPAFGDVSPRVSINRGDNEVSLGNPDLDPYRSQNLDLSFEKYLGSTGVIS
EEEECCCCCCCCCCCCCCCCEEEECCCCEEECCCCCCCCCCCCCCCEEHHHHCCCCCEEE
LGVFHKSIDDYIVQTINTNDAEFPGLQVTRSINGDTAKVRGAEFNWQQTLDFLPEGWNGF
EHHHHHHHHHHHEEEECCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHCCCCCCCEE
LVGASATLLDSDFNPGLENRAGDDFTLPRSSKRIYSGHLGYEKYGFSARVAAVYRSQYLD
EEECEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHCCCCHHHHHHHHHHHHH
TIGQSRAYDIYVAPHTQLDFSMNYQFNSHVSLYLEAQNLLDEPLELYQGIRSRTLQNEEY
HHCCCCEEEEEECCCCEEEEEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCC
GRTYALGLKVAL
CCEEEEEEEEEC
>Mature Secondary Structure
MLNKTPLCLAITLTLAAATWSPLAHAAQGAATGGAASAAAIDLERLEVRPQLEAQERAVD
CCCCCCCCEEEEEHHHHHHCCHHHHHHCCCCCCCCCHHHEEEHHHHCCCCCCCHHHHHHH
LKRASDAIQDAVASDAMGRYPDKNVAESLQRLPGVSVTRDQGEGRFVVIRGLDSSLNSVT
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCCCEEE
IDGMTMGTPEDGTRSAPLDVIPSDSTERLKVVKSPTPDMPGDSIGGAIQVESTSAFDRDG
ECCEEECCCCCCCCCCCCEECCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCC
RTLRGSIEASHQSLSGKTSPKGAFNYSDIFNGTFGVAVGVNYQDREFESDNTEVAYDTFD
CEEEECHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEECCC
GGADDDLFAGEVQRRKYFIERTRMGANLNLDWRPDADNRYYLRTLYSRFDDAETRQRTIF
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHCCCCCCCCEEEE
GLSDGEVSANGDGTYRVDDLPADSISKRVRYRTKKEDTMALSVGGENRLSAATVDYKLGY
EECCCEEECCCCCCEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEEECCC
TKTRERVNDEKEARFNYDGDDLAATVDQRSGIPKLGFSDNGWQSNDDFVFDRFVIAPTQV
HHHHHHCCCCHHHCCCCCCHHHEEEHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCC
DDSERSAQINVRFDGEHSSLKMGVLGRWRERGVNVDENELRRGPAIDLSDWTTPAPEHRG
CCCCCCEEEEEEECCCCCCEEECHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCC
GTLGQSIGSDGMRRYWNTSGDLYSARPQDVGGNLQTSLQDDYTATEDVFATYAMGTWDIG
CCHHHHHCCHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHEEEECCCCCHH
ALRMIAGVRVENTQFDATGNQVDVAANGRTATVTPREASSSYTNVLPGLHLRYDSGNDWV
HHHHHHCEEEECCEECCCCCEEEEEECCEEEEECCCCCCCCHHHCCCCEEEEECCCCCEE
LRFAANKTLSRPAFGDVSPRVSINRGDNEVSLGNPDLDPYRSQNLDLSFEKYLGSTGVIS
EEEECCCCCCCCCCCCCCCCEEEECCCCEEECCCCCCCCCCCCCCCEEHHHHCCCCCEEE
LGVFHKSIDDYIVQTINTNDAEFPGLQVTRSINGDTAKVRGAEFNWQQTLDFLPEGWNGF
EHHHHHHHHHHHEEEECCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHCCCCCCCEE
LVGASATLLDSDFNPGLENRAGDDFTLPRSSKRIYSGHLGYEKYGFSARVAAVYRSQYLD
EEECEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHCCCCHHHHHHHHHHHHH
TIGQSRAYDIYVAPHTQLDFSMNYQFNSHVSLYLEAQNLLDEPLELYQGIRSRTLQNEEY
HHCCCCEEEEEECCCCEEEEEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCC
GRTYALGLKVAL
CCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA