| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is hisC [H]
Identifier: 78047223
GI number: 78047223
Start: 1875855
End: 1876979
Strand: Reverse
Name: hisC [H]
Synonym: XCV1667
Alternate gene names: 78047223
Gene position: 1876979-1875855 (Counterclockwise)
Preceding gene: 78047231
Following gene: 78047215
Centisome position: 36.25
GC content: 69.42
Gene sequence:
>1125_bases GTGTCGTTGCCCGTCTCGCGCCGTTCGTTTCTCAGCCTCGCTACCACCGGCGTGGCGGTTTCCGCACTGGGGCTGGCACC CGCAGCCGAAGCGGCCCGCAAGCGCGCCGCGGCGGCGGCAACGCCGGGCGTGGCCGCGGCGGCCGGCACGGTCTACCTCA ACCTCAACGAGCATCCGCTCGGGCCTGCCCCGGCCGCCTTGGACGCTGCCACCCGTTCGCTGGCACGCTCGGGCCGCTAC CTGCTCGAGATGGAGCAGGATCTGCGTAACCTGATGACCGGCGAGCTGCAGCTGCCCAACGATCATCTGTCGTTATTCCC CGGGTCGCGGGACGCGCTGAACCGTGCCGGCAGCCTGTTCACGTCCGCGCGTGCAGGGCTGGTGGTGGCCGACCCGAGCT TCGACCCGTTGATCGAAAGCGCCACCGCCCGCGGCGTGGCCGTACGCAAGGTGCCGCTGCGTGCCGATGGCGCGCATGAC GTCAAGGCGATGGCCAAGGCCGACCCGACTGCCGGCATGCTGTATCTGTGCAACCCCGGCAACGCCACCGGCGCCATCAC CCCGCGCGCCGACATCGAATGGTTGCTGGCCAACAAACCGGCCAGCGCCGTGCTGGTGGTCGACGAGGCGTACATCCACT ACAGCAACGAGCCCTCGGTGGCCGATCTGGTGCGTCAGCGCCAGGATCTGATCGTGCTGCGCAGCTTCTCCAAGCTCTAC GGCATGGCCGGCCTGCGCCTGGGCGCCGCCCTGGCCCCGCCCGGCCTGCAGACCAAACTTGCCGCTTTCGGCAGCAACCC GGTGTCGGTTCCGGCAATGGCCGCCGGTATCGCCAGCCTGCGCGACCCGCTGCTGGTGCAGACCCGCCGCGCCGAGAACG CCCGGGTGCGCGAGGAGACCATCGCCTGGCTCAAGGGCAAGGGCTACACCTGCCTGCCCTCGCAAGCCAACTGCTTCCTG CTGGACGTCAAGCGCGATGCGAGCGTGTTCGCCGATTCGATGCAAAAGCAGGGCGTCATCGTCGGCCGCAGCTGGCCGAT CTGGCCCAAGCGCGTGCGCGTCAGCGTGGGGACCGAAGCGGAAATGCTGCGCTTCCGCGAGGCATTCGGGAAAGCCAAGC GTTGA
Upstream 100 bases:
>100_bases AAGCATGCGTCGAACAGTTTTATGGCAATTCCCCGATAGGCAGATAGACACAAACCCGCTAGCGTGGCGCCCTCTTTGCC CGCCGCCTATGGAGTTCGCC
Downstream 100 bases:
>100_bases GCACTCAGTACTGAATGGTAGATCCTTCTCCACTCGGGACATTGTCCTCCTTCATGGGGGAGAAGGTGCCCCGAAGGGGT GGATGAGGGTGCGAGCGACG
Product: putative aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase [H]
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MSLPVSRRSFLSLATTGVAVSALGLAPAAEAARKRAAAAATPGVAAAAGTVYLNLNEHPLGPAPAALDAATRSLARSGRY LLEMEQDLRNLMTGELQLPNDHLSLFPGSRDALNRAGSLFTSARAGLVVADPSFDPLIESATARGVAVRKVPLRADGAHD VKAMAKADPTAGMLYLCNPGNATGAITPRADIEWLLANKPASAVLVVDEAYIHYSNEPSVADLVRQRQDLIVLRSFSKLY GMAGLRLGAALAPPGLQTKLAAFGSNPVSVPAMAAGIASLRDPLLVQTRRAENARVREETIAWLKGKGYTCLPSQANCFL LDVKRDASVFADSMQKQGVIVGRSWPIWPKRVRVSVGTEAEMLRFREAFGKAKR
Sequences:
>Translated_374_residues MSLPVSRRSFLSLATTGVAVSALGLAPAAEAARKRAAAAATPGVAAAAGTVYLNLNEHPLGPAPAALDAATRSLARSGRY LLEMEQDLRNLMTGELQLPNDHLSLFPGSRDALNRAGSLFTSARAGLVVADPSFDPLIESATARGVAVRKVPLRADGAHD VKAMAKADPTAGMLYLCNPGNATGAITPRADIEWLLANKPASAVLVVDEAYIHYSNEPSVADLVRQRQDLIVLRSFSKLY GMAGLRLGAALAPPGLQTKLAAFGSNPVSVPAMAAGIASLRDPLLVQTRRAENARVREETIAWLKGKGYTCLPSQANCFL LDVKRDASVFADSMQKQGVIVGRSWPIWPKRVRVSVGTEAEMLRFREAFGKAKR >Mature_373_residues SLPVSRRSFLSLATTGVAVSALGLAPAAEAARKRAAAAATPGVAAAAGTVYLNLNEHPLGPAPAALDAATRSLARSGRYL LEMEQDLRNLMTGELQLPNDHLSLFPGSRDALNRAGSLFTSARAGLVVADPSFDPLIESATARGVAVRKVPLRADGAHDV KAMAKADPTAGMLYLCNPGNATGAITPRADIEWLLANKPASAVLVVDEAYIHYSNEPSVADLVRQRQDLIVLRSFSKLYG MAGLRLGAALAPPGLQTKLAAFGSNPVSVPAMAAGIASLRDPLLVQTRRAENARVREETIAWLKGKGYTCLPSQANCFLL DVKRDASVFADSMQKQGVIVGRSWPIWPKRVRVSVGTEAEMLRFREAFGKAKR
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788332, Length=253, Percent_Identity=28.0632411067194, Blast_Score=81, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6322075, Length=279, Percent_Identity=27.9569892473118, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.9 [H]
Molecular weight: Translated: 39656; Mature: 39525
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: PS00105 AA_TRANSFER_CLASS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPVSRRSFLSLATTGVAVSALGLAPAAEAARKRAAAAATPGVAAAAGTVYLNLNEHPL CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEECCEEEEEECCCCC GPAPAALDAATRSLARSGRYLLEMEQDLRNLMTGELQLPNDHLSLFPGSRDALNRAGSLF CCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCEECCCCCEEECCCCHHHHHHHHHHH TSARAGLVVADPSFDPLIESATARGVAVRKVPLRADGAHDVKAMAKADPTAGMLYLCNPG HHCCCCEEEECCCCCHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCEEEEECCC NATGAITPRADIEWLLANKPASAVLVVDEAYIHYSNEPSVADLVRQRQDLIVLRSFSKLY CCCCEECCCCCEEEEEECCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH GMAGLRLGAALAPPGLQTKLAAFGSNPVSVPAMAAGIASLRDPLLVQTRRAENARVREET HHHHHHHCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHH IAWLKGKGYTCLPSQANCFLLDVKRDASVFADSMQKQGVIVGRSWPIWPKRVRVSVGTEA HHHCCCCCCEECCCCCCEEEEEECCCHHHHHHHHHHCCEEEECCCCCCCCEEEEEECCHH EMLRFREAFGKAKR HHHHHHHHHCCCCC >Mature Secondary Structure SLPVSRRSFLSLATTGVAVSALGLAPAAEAARKRAAAAATPGVAAAAGTVYLNLNEHPL CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEECCEEEEEECCCCC GPAPAALDAATRSLARSGRYLLEMEQDLRNLMTGELQLPNDHLSLFPGSRDALNRAGSLF CCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCEECCCCCEEECCCCHHHHHHHHHHH TSARAGLVVADPSFDPLIESATARGVAVRKVPLRADGAHDVKAMAKADPTAGMLYLCNPG HHCCCCEEEECCCCCHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCEEEEECCC NATGAITPRADIEWLLANKPASAVLVVDEAYIHYSNEPSVADLVRQRQDLIVLRSFSKLY CCCCEECCCCCEEEEEECCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH GMAGLRLGAALAPPGLQTKLAAFGSNPVSVPAMAAGIASLRDPLLVQTRRAENARVREET HHHHHHHCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHH IAWLKGKGYTCLPSQANCFLLDVKRDASVFADSMQKQGVIVGRSWPIWPKRVRVSVGTEA HHHCCCCCCEECCCCCCEEEEEECCCHHHHHHHHHHCCEEEECCCCCCCCEEEEEECCHH EMLRFREAFGKAKR HHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]