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The map label for this gene is recN [H]

Identifier: 78047117

GI number: 78047117

Start: 1759135

End: 1760904

Strand: Reverse

Name: recN [H]

Synonym: XCV1561

Alternate gene names: 78047117

Gene position: 1760904-1759135 (Counterclockwise)

Preceding gene: 78047124

Following gene: 78047115

Centisome position: 34.0

GC content: 69.94

Gene sequence:

>1770_bases
GTGAGACAGCGCATAGATAATGTCTGGCCCCGGGGATGGCAAGCGTCCGATTCCCCGTCTGCCCCTGCCACCCTAAGCTT
CCCCAAAGCGTTCACACTCGACCTCATGCTCAGACACCTCTCGATCAAGGATTTCGCCGTTGTCCGTGCCACCGAACTGG
AATTCGGGCCGGGAATGACCGTGGTATCGGGCGAAACCGGCGCCGGCAAGTCGCTGATGGTGGACGCGCTGGGCTTTCTG
TCCGGGCTGCGCGCCGACAGCGGCGTGGTGCGTCATGGCGCCGAGCGCGCCGAACTGTCGGCCGAATTCCAGCTGCCGGC
CGAGCATCCCGGGCTGCGCTGGCTGGCCGACAACGAACTCGACGACGAGGCGCAATGCCAGCTGCGCCGGATCATCCGCG
CCGACGGCGGCTCGCGCGCCTGGATCAACGGCCGCCCGGTCACCTCCTCGCAACTGGCGGAACTCGCCTCGAAACTGGTC
GAAATCCACGGCCAGCACGAGCACCAGGCGCTGATGGCCCGGCACAGCCAGCTCGCCCTGCTCGATGCCTACGCCCGCAA
CAGCGCCCAGCGCGAGCAGGTGCGCCAGGCCAGCCAGCGCTGGCAGGCGCTGCTGGACGAGCGTGATGCGCTCTCCGCGC
AGGGCGATGTCTCCGACCGGATCGGCTTTCTGGAACACCAACTGGCCGAATTGGAACGCGAGGACCTGGATCCGGCCGCG
ATTGCCGCACTGGACGTCAATCACCGCCGCCAGGCCCATGCCACCGCGCTGATCGGTGCCTGCGACAGCGTCGCCCAGCA
GCTCAACGGCGACGACGGCGCCAGTGCCCTGGGCCTGTTGCAGGACAGCCGCCACGATTTGTCGCGCGTGGCCGAACACG
AACCGCGGCTGGGCGAAGTGGACGCGCTGCTGGACAGCGCCGTGATCCAGATCGGGGAAGCGCTGGCCCTGCTCGACCGT
GTGCGCGACGACCTGGAGGCCGACCCGGCCCAGTTCGAGGCGATGGAGCGCCGCCTTGGCCGCCTGCACGACCTGGCCCG
CAAACACCGCGTCACGCCGGACGAACTGGCCGCGCATCGCGACCACCTGAGCGCCGAAGTCGAGAGCCTGCGCGGCGCCG
ACGAGCGCCTGCAGCAGCTCGACAAGCACATCGAAATCGCCACCGGCGCCTGGCGCAGCGCGGCCGGCGTGCTCAGCGAC
AGCCGCACCGCCGCCGCCGAGGCGTTGTCGGCCGCGACCACCGCGCTGATCGGCGAGTTGGGCATGGGCGGCGGGCAGTT
CCTGATCCAGCTACAGCCGCACGAGAGCCCCCGGCCGGACCCCAATGGCGCCGAACGGGTGGAATTCCTGGTCGCCGCCA
ACGCCGGGCAGCCCCCGCGCGCTTTGCGCAAGGTCGCCTCCGGCGGCGAGCTGTCGCGCATTTCGCTGGCCATCGAAGTG
GCGGCGCTGGGCCTGGACAGCGTGCCCACCATGGTGTTCGACGAAGTGGATTCGGGCATCGGCGGCGCGGTGGCCGACAT
CGTCGGGCAGAAGCTGCGCGCGCTGGGCGAAGAGCGCCAGGTGCTGTGCGTCACCCACTTGCCGCAGGTCGCCGCCAAGG
GCCACGCGCATTACCGGGTCAGCAAGGCGCCGGTGGACGGCATGACCCAGAGTGCGGTCGAACTGCTCGGCCCGCAGGCC
CGCCAGGAAGAATTGGCACGCATGCTGGGCGGCGTGGAAGTGAGCAAGGAAGCGCGCGCGGCCGCCCGCAAGCTGCTGCA
GAGCGCCTGA

Upstream 100 bases:

>100_bases
GGCTCGCCGTCGCGGATGTAGCGCGCAATCAGGGTGCGCAGCAACTGGCGGGCGCGGGGGTCGAGCATTGGGGACTGGGA
CGCGCGCATGGGATCATCCG

Downstream 100 bases:

>100_bases
GCGGGTTCGGTCGTTCGCAAGCCAGTGCGAAGGGCTTGATCAGGGCAGCCGGCACTGTTGGTGCTGCTGCGCCGGTGCGC
CGGTAGGGGTAATCACGCAT

Product: recombination protein N

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 589; Mature: 589

Protein sequence:

>589_residues
MRQRIDNVWPRGWQASDSPSAPATLSFPKAFTLDLMLRHLSIKDFAVVRATELEFGPGMTVVSGETGAGKSLMVDALGFL
SGLRADSGVVRHGAERAELSAEFQLPAEHPGLRWLADNELDDEAQCQLRRIIRADGGSRAWINGRPVTSSQLAELASKLV
EIHGQHEHQALMARHSQLALLDAYARNSAQREQVRQASQRWQALLDERDALSAQGDVSDRIGFLEHQLAELEREDLDPAA
IAALDVNHRRQAHATALIGACDSVAQQLNGDDGASALGLLQDSRHDLSRVAEHEPRLGEVDALLDSAVIQIGEALALLDR
VRDDLEADPAQFEAMERRLGRLHDLARKHRVTPDELAAHRDHLSAEVESLRGADERLQQLDKHIEIATGAWRSAAGVLSD
SRTAAAEALSAATTALIGELGMGGGQFLIQLQPHESPRPDPNGAERVEFLVAANAGQPPRALRKVASGGELSRISLAIEV
AALGLDSVPTMVFDEVDSGIGGAVADIVGQKLRALGEERQVLCVTHLPQVAAKGHAHYRVSKAPVDGMTQSAVELLGPQA
RQEELARMLGGVEVSKEARAAARKLLQSA

Sequences:

>Translated_589_residues
MRQRIDNVWPRGWQASDSPSAPATLSFPKAFTLDLMLRHLSIKDFAVVRATELEFGPGMTVVSGETGAGKSLMVDALGFL
SGLRADSGVVRHGAERAELSAEFQLPAEHPGLRWLADNELDDEAQCQLRRIIRADGGSRAWINGRPVTSSQLAELASKLV
EIHGQHEHQALMARHSQLALLDAYARNSAQREQVRQASQRWQALLDERDALSAQGDVSDRIGFLEHQLAELEREDLDPAA
IAALDVNHRRQAHATALIGACDSVAQQLNGDDGASALGLLQDSRHDLSRVAEHEPRLGEVDALLDSAVIQIGEALALLDR
VRDDLEADPAQFEAMERRLGRLHDLARKHRVTPDELAAHRDHLSAEVESLRGADERLQQLDKHIEIATGAWRSAAGVLSD
SRTAAAEALSAATTALIGELGMGGGQFLIQLQPHESPRPDPNGAERVEFLVAANAGQPPRALRKVASGGELSRISLAIEV
AALGLDSVPTMVFDEVDSGIGGAVADIVGQKLRALGEERQVLCVTHLPQVAAKGHAHYRVSKAPVDGMTQSAVELLGPQA
RQEELARMLGGVEVSKEARAAARKLLQSA
>Mature_589_residues
MRQRIDNVWPRGWQASDSPSAPATLSFPKAFTLDLMLRHLSIKDFAVVRATELEFGPGMTVVSGETGAGKSLMVDALGFL
SGLRADSGVVRHGAERAELSAEFQLPAEHPGLRWLADNELDDEAQCQLRRIIRADGGSRAWINGRPVTSSQLAELASKLV
EIHGQHEHQALMARHSQLALLDAYARNSAQREQVRQASQRWQALLDERDALSAQGDVSDRIGFLEHQLAELEREDLDPAA
IAALDVNHRRQAHATALIGACDSVAQQLNGDDGASALGLLQDSRHDLSRVAEHEPRLGEVDALLDSAVIQIGEALALLDR
VRDDLEADPAQFEAMERRLGRLHDLARKHRVTPDELAAHRDHLSAEVESLRGADERLQQLDKHIEIATGAWRSAAGVLSD
SRTAAAEALSAATTALIGELGMGGGQFLIQLQPHESPRPDPNGAERVEFLVAANAGQPPRALRKVASGGELSRISLAIEV
AALGLDSVPTMVFDEVDSGIGGAVADIVGQKLRALGEERQVLCVTHLPQVAAKGHAHYRVSKAPVDGMTQSAVELLGPQA
RQEELARMLGGVEVSKEARAAARKLLQSA

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=557, Percent_Identity=40.0359066427289, Blast_Score=352, Evalue=5e-98,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 63447; Mature: 63447

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQRIDNVWPRGWQASDSPSAPATLSFPKAFTLDLMLRHLSIKDFAVVRATELEFGPGMT
CCCCHHCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHCHHHHHEEEEEEECCCCCCE
VVSGETGAGKSLMVDALGFLSGLRADSGVVRHGAERAELSAEFQLPAEHPGLRWLADNEL
EEECCCCCCHHHHHHHHHHHHHCCCCCCHHHCCCHHHHCCCEEECCCCCCCCEEECCCCC
DDEAQCQLRRIIRADGGSRAWINGRPVTSSQLAELASKLVEIHGQHEHQALMARHSQLAL
CHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LDAYARNSAQREQVRQASQRWQALLDERDALSAQGDVSDRIGFLEHQLAELEREDLDPAA
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHH
IAALDVNHRRQAHATALIGACDSVAQQLNGDDGASALGLLQDSRHDLSRVAEHEPRLGEV
EEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHH
DALLDSAVIQIGEALALLDRVRDDLEADPAQFEAMERRLGRLHDLARKHRVTPDELAAHR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
DHLSAEVESLRGADERLQQLDKHIEIATGAWRSAAGVLSDSRTAAAEALSAATTALIGEL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
GMGGGQFLIQLQPHESPRPDPNGAERVEFLVAANAGQPPRALRKVASGGELSRISLAIEV
CCCCCEEEEEECCCCCCCCCCCHHHHEEEEEECCCCCCHHHHHHHHCCCCEEHHHHHHHH
AALGLDSVPTMVFDEVDSGIGGAVADIVGQKLRALGEERQVLCVTHLPQVAAKGHAHYRV
HHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEHHCHHHHHCCCCCEEE
SKAPVDGMTQSAVELLGPQARQEELARMLGGVEVSKEARAAARKLLQSA
ECCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MRQRIDNVWPRGWQASDSPSAPATLSFPKAFTLDLMLRHLSIKDFAVVRATELEFGPGMT
CCCCHHCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHCHHHHHEEEEEEECCCCCCE
VVSGETGAGKSLMVDALGFLSGLRADSGVVRHGAERAELSAEFQLPAEHPGLRWLADNEL
EEECCCCCCHHHHHHHHHHHHHCCCCCCHHHCCCHHHHCCCEEECCCCCCCCEEECCCCC
DDEAQCQLRRIIRADGGSRAWINGRPVTSSQLAELASKLVEIHGQHEHQALMARHSQLAL
CHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LDAYARNSAQREQVRQASQRWQALLDERDALSAQGDVSDRIGFLEHQLAELEREDLDPAA
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHH
IAALDVNHRRQAHATALIGACDSVAQQLNGDDGASALGLLQDSRHDLSRVAEHEPRLGEV
EEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHH
DALLDSAVIQIGEALALLDRVRDDLEADPAQFEAMERRLGRLHDLARKHRVTPDELAAHR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
DHLSAEVESLRGADERLQQLDKHIEIATGAWRSAAGVLSDSRTAAAEALSAATTALIGEL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
GMGGGQFLIQLQPHESPRPDPNGAERVEFLVAANAGQPPRALRKVASGGELSRISLAIEV
CCCCCEEEEEECCCCCCCCCCCHHHHEEEEEECCCCCCHHHHHHHHCCCCEEHHHHHHHH
AALGLDSVPTMVFDEVDSGIGGAVADIVGQKLRALGEERQVLCVTHLPQVAAKGHAHYRV
HHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEHHCHHHHHCCCCCEEE
SKAPVDGMTQSAVELLGPQARQEELARMLGGVEVSKEARAAARKLLQSA
ECCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]