Click here to switch to the map view.

The map label for this gene is gatC

Identifier: 78045230

GI number: 78045230

Start: 976711

End: 976995

Strand: Direct

Name: gatC

Synonym: CHY_1101

Alternate gene names: 78045230

Gene position: 976711-976995 (Clockwise)

Preceding gene: 78043193

Following gene: 78044168

Centisome position: 40.67

GC content: 39.65

Gene sequence:

>285_bases
ATGACAATTTCCTTAAAAGATGTTGAACATGTGGCAATGCTTGCCCGGTTAAAATTAAGTGACGAAGAAAAGGAAATGTA
TACAAAACAGTTGAATGATATTTTAAAATATGCCGAGCAGTTGCAGGAGCTTGATACCGAAAACGTTAAACCCACCGCCC
ACGTGCTGCCCATCAAAAATGTTTTTCGGGAAGATAAAGTTCATCAGCATTTAGATCCCGAAAAAGCCCTGGCCAATGCT
CCGGAACGGGAAGAAAACTTCTTTAAGGTGCCGAAAATTATTTAA

Upstream 100 bases:

>100_bases
CGCCAGATGGTGATGAGCTAAGATTTTCACTATTTTCTTGCCAATGTTTGTTAAATTTTTGTATAATGGCAAAAGGATAT
TTTTTAAAGGGGGAACTGTT

Downstream 100 bases:

>100_bases
AGGAGGGTACGGTTTTGGAACTATATTACTTAAGTGCAAAAGAAATAACAGAAAAAATAAAGGCTAAAGAGATATCGGCG
GTAGAGGTGGCAAAAGCTAC

Product: glutamyl-tRNA(Gln) amidotransferase subunit C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C

Number of amino acids: Translated: 94; Mature: 93

Protein sequence:

>94_residues
MTISLKDVEHVAMLARLKLSDEEKEMYTKQLNDILKYAEQLQELDTENVKPTAHVLPIKNVFREDKVHQHLDPEKALANA
PEREENFFKVPKII

Sequences:

>Translated_94_residues
MTISLKDVEHVAMLARLKLSDEEKEMYTKQLNDILKYAEQLQELDTENVKPTAHVLPIKNVFREDKVHQHLDPEKALANA
PEREENFFKVPKII
>Mature_93_residues
TISLKDVEHVAMLARLKLSDEEKEMYTKQLNDILKYAEQLQELDTENVKPTAHVLPIKNVFREDKVHQHLDPEKALANAP
EREENFFKVPKII

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_CARHZ (Q3AD37)

Other databases:

- EMBL:   CP000141
- RefSeq:   YP_359947.1
- ProteinModelPortal:   Q3AD37
- SMR:   Q3AD37
- STRING:   Q3AD37
- GeneID:   3728356
- GenomeReviews:   CP000141_GR
- KEGG:   chy:CHY_1101
- NMPDR:   fig|246194.3.peg.1148
- TIGR:   CHY_1101
- eggNOG:   COG0721
- HOGENOM:   HBG586403
- OMA:   PTSHAVP
- ProtClustDB:   CLSK842130
- BioCyc:   CHYD246194:CHY_1101-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 10996; Mature: 10865

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTISLKDVEHVAMLARLKLSDEEKEMYTKQLNDILKYAEQLQELDTENVKPTAHVLPIKN
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
VFREDKVHQHLDPEKALANAPEREENFFKVPKII
HHHHHHHHHCCCHHHHHCCCCCCCCHHHCCCCCC
>Mature Secondary Structure 
TISLKDVEHVAMLARLKLSDEEKEMYTKQLNDILKYAEQLQELDTENVKPTAHVLPIKN
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
VFREDKVHQHLDPEKALANAPEREENFFKVPKII
HHHHHHHHHCCCHHHHHCCCCCCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA