Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
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Accession | NC_007503 |
Length | 2,401,520 |
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The map label for this gene is 78044609
Identifier: 78044609
GI number: 78044609
Start: 902055
End: 902741
Strand: Direct
Name: 78044609
Synonym: CHY_1022
Alternate gene names: NA
Gene position: 902055-902741 (Clockwise)
Preceding gene: 78042977
Following gene: 78042826
Centisome position: 37.56
GC content: 38.28
Gene sequence:
>687_bases GTGATTATTTTGAACCAAGACCTTTACGCAAAAACCATAAAGTGTCCTCTTTGTGGTAATGAATATAAAACTCTTAAAGT AAAGACTTCTGCCTTACGTCCTGCTGGAATGGACGGTGATTTATGTATGCGCTATTCCGGGTTAAATCCCCTTTATTATA AAGTAAATGTTTGCCCCCAGTGTTTTTATGCTTTTACCGATGAGTTTACAAATATAAAAAAAACGGAACTGGAGCTTTTG AAAAACGAACTGGCCAAAAACCCCCTGCCTTTTAATTTCTGCGGGGAGCGGGACTTTACTTTGGCGGTAAAATCTTACGG ACAGGCTTTGAAGTGTGCTTTACTTAAAAAAGAAAAAGATAGTATTATTGGCCGACTGTGTCATAATCTTGCCTGTTTAT ATCGAACCCAGGGAGAACTTGAAAATGAAGAAAAATATTTGCACTATGCCCTGAATTATTACGAAAAAGCTTTTACCACC GAAGCGAATGCCAAAGATACTTATACATTGGCTTACTTAATTGGGGAGCTTAGCCGCCGCTTGAAAGATTACGAAAAGGC GGCTAAGTGGTTTGGTTATTTATTACAAAATAAAAATATGTTGCCCCAAAAGCTGGTGAATCTGGTACAGGAGCAGTGGC AGGTCTTGCGGGAAGAAAAAAGATGGTATAGTTCCAAATTAGTTTAA
Upstream 100 bases:
>100_bases CCCAGGGGTGCTACTAAAAATCGGTCGTTTTCAGAAAACCTTCAGGGAAACGGAATACGGGGTGCTTTTTGCCGGTGAAA AAGATTTATAAGGGAATGGA
Downstream 100 bases:
>100_bases TACAGAGGTGATGGTATGAAATTAAATTCCTTACGGGTCAAGATTTTAGCCATTCTTCTTTTGATGGTAACTATTCCTTT ATTGGTTAATACCGCTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MIILNQDLYAKTIKCPLCGNEYKTLKVKTSALRPAGMDGDLCMRYSGLNPLYYKVNVCPQCFYAFTDEFTNIKKTELELL KNELAKNPLPFNFCGERDFTLAVKSYGQALKCALLKKEKDSIIGRLCHNLACLYRTQGELENEEKYLHYALNYYEKAFTT EANAKDTYTLAYLIGELSRRLKDYEKAAKWFGYLLQNKNMLPQKLVNLVQEQWQVLREEKRWYSSKLV
Sequences:
>Translated_228_residues MIILNQDLYAKTIKCPLCGNEYKTLKVKTSALRPAGMDGDLCMRYSGLNPLYYKVNVCPQCFYAFTDEFTNIKKTELELL KNELAKNPLPFNFCGERDFTLAVKSYGQALKCALLKKEKDSIIGRLCHNLACLYRTQGELENEEKYLHYALNYYEKAFTT EANAKDTYTLAYLIGELSRRLKDYEKAAKWFGYLLQNKNMLPQKLVNLVQEQWQVLREEKRWYSSKLV >Mature_228_residues MIILNQDLYAKTIKCPLCGNEYKTLKVKTSALRPAGMDGDLCMRYSGLNPLYYKVNVCPQCFYAFTDEFTNIKKTELELL KNELAKNPLPFNFCGERDFTLAVKSYGQALKCALLKKEKDSIIGRLCHNLACLYRTQGELENEEKYLHYALNYYEKAFTT EANAKDTYTLAYLIGELSRRLKDYEKAAKWFGYLLQNKNMLPQKLVNLVQEQWQVLREEKRWYSSKLV
Specific function: Unknown
COG id: COG1655
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26618; Mature: 26618
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIILNQDLYAKTIKCPLCGNEYKTLKVKTSALRPAGMDGDLCMRYSGLNPLYYKVNVCPQ CEEECCCHHHHHEECCCCCCCCEEEEEEHHHCCCCCCCCCCEEEECCCCCEEEEEECCHH CFYAFTDEFTNIKKTELELLKNELAKNPLPFNFCGERDFTLAVKSYGQALKCALLKKEKD HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SIIGRLCHNLACLYRTQGELENEEKYLHYALNYYEKAFTTEANAKDTYTLAYLIGELSRR HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH LKDYEKAAKWFGYLLQNKNMLPQKLVNLVQEQWQVLREEKRWYSSKLV HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIILNQDLYAKTIKCPLCGNEYKTLKVKTSALRPAGMDGDLCMRYSGLNPLYYKVNVCPQ CEEECCCHHHHHEECCCCCCCCEEEEEEHHHCCCCCCCCCCEEEECCCCCEEEEEECCHH CFYAFTDEFTNIKKTELELLKNELAKNPLPFNFCGERDFTLAVKSYGQALKCALLKKEKD HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH SIIGRLCHNLACLYRTQGELENEEKYLHYALNYYEKAFTTEANAKDTYTLAYLIGELSRR HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH LKDYEKAAKWFGYLLQNKNMLPQKLVNLVQEQWQVLREEKRWYSSKLV HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA