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The map label for this gene is mcpB [H]

Identifier: 78042826

GI number: 78042826

Start: 902757

End: 904616

Strand: Direct

Name: mcpB [H]

Synonym: CHY_1023

Alternate gene names: 78042826

Gene position: 902757-904616 (Clockwise)

Preceding gene: 78044609

Following gene: 78044953

Centisome position: 37.59

GC content: 46.02

Gene sequence:

>1860_bases
ATGAAATTAAATTCCTTACGGGTCAAGATTTTAGCCATTCTTCTTTTGATGGTAACTATTCCTTTATTGGTTAATACCGC
TTTTAATTATTATGAAGCCCAAAAGGTGTTGTATAACAAATTACAAAATACAGCCAGGGATGCAGCTAAGCTCGGTGATG
TAGCCATTGACCATTTTCTTGGGGGAATCCAGCAGACTATCGATACTTTAGCTCAAGAAGATAACGCCATTAACTTCTAC
GATATACCTGGCTGCGCCCAGTGGTTTGGTAAGACTTTGGATAATACTCGCAAAAATAATCCGGCGATAATGTCGATTTA
CATAGGTACCGTCCGCGGGGAAATTTATCTCTATCCCAAACAACCATTACCTGCAGGGTATGACCCCAGAAAACGTCCAT
GGTATCAGAAAGCTTTGGCTTCACCCGGAAAAGCCGTTTGGACCGAGCCGTATCAGGATGCGTTTACCGGTAAGACCGTA
GTTACCGTAGCCCGCCTGGTAGAGAAAAATGGTAAGCCGGTGGGGGTTGTAGCGGCAGATATTCTTTTAGACCATTTTAA
TGATAAAATTAAAGAGATAAAGGTTGGTAAAACCGGCTATCTTTTTGCTATCGACCAAAAGGGCACGGTTTTAGCCCACA
AAGATCCCAAACTCTTAGGCAAATCGTTTGCTAACTATGATTTTGCCCAAAAAATGCTCTCCCGGGATTCTGGGTTTTTT
AAATATCATTACAACGGGGTGGATAAATATCTTGCTTTTATTACCTCGCCCCGTACTGGCTGGAAAATGGCAGCGAACTT
TGAGGCGGCAGAAATTGGTGCCGATACTAAAACAATACTCACGGCAAGCATTATTATTTTCCTAATTACCGTAATCTTAT
TAACCATTCTGGCCCTTTTCGTGGCGCGTTATATCAGTAACCCCATTCAGCATGTGGTGGAGAAACTTAACCTTATCCGC
AGCGGGGACCTGACGGTTGCAATTGAAGGAACCGAAAGAAATGATGAACTGGGGGTTTTGGCAAAAAGTTTACAGGATAC
CGTAGCGGGAGTGGCAGCTCTGGTGCAAAAAATCCGGGAAGTTGCTTCTTCAGTGGCGGCGGCGGCCCAGGAAATATCTG
CCAGTACCCAGCAAATTGCTACCGGCAGCCAAAATCAAACCAGTGAAATCAATGCCATAGCCATGGAAATGGATGCCTTT
GCCGAAAAAGCTGCCAAAGCTGCGGCGTATGTTTCGGAAATGCTTAAACTTGCCGAGGAAACCGTTTTTTCGGCAACCCA
GGGGGAAAAAGCTTTAAATGAAAACTTCGGCGGGCTTGAAGAAATAAAAGCCAAGGTTTCGGATTTAGAGAAAAGTGCCC
AGGCGATTAGCGGGATGCTTGAGATAATTAACGAAATAGCCGAGCAAACCAATCTTTTAGCCTTAAATGCTGCTATTGAA
GCCGCCAGGGCCGGCGAACACGGCCGGGGTTTTGCGGTGGTCGCCGAAGAAGTCCGTAAACTTGCCGAGCGCTCTGCCCG
GGCTACCGAGGAAATCTCGGCTGTGGTTAAAGAAATCTCGGCTGGCATGCAGGTGGCGTTAAAAGCTGTTAACGAAGGTG
AACGTTTAGGAAGGGTTGCTTCGGAAAGCTTTAAGGAAATTTTCGGAAAGATTGAAGCGTTAGATGAACGGATTCGCGAG
ATCAGCACCATTGCCCAGCAGCAGTCCGAAGGCAGCGAAAAGGTTGCTCGATCCCTGCAAAACATTTCGGCCATTACCGA
AGAAATTTCCGCCACGATTGAGGAAAACAGTGCGGCTACCGAAGAGCTGGCTGCCTCGGCTCAGGAACTGGTGGCCAATG
TGGAGAAATTTAAAGTTTAA

Upstream 100 bases:

>100_bases
GCCCCAAAAGCTGGTGAATCTGGTACAGGAGCAGTGGCAGGTCTTGCGGGAAGAAAAAAGATGGTATAGTTCCAAATTAG
TTTAATACAGAGGTGATGGT

Downstream 100 bases:

>100_bases
GAAGAAAACCCGCCTTTGGGCGGGTTTTATATTTTTCTTTTGCTTTTCTTTTATAGCTTCAGAGGGTAACAGATAAATTT
TGAATGACCAAGGTAACTGC

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: H3 [H]

Number of amino acids: Translated: 619; Mature: 619

Protein sequence:

>619_residues
MKLNSLRVKILAILLLMVTIPLLVNTAFNYYEAQKVLYNKLQNTARDAAKLGDVAIDHFLGGIQQTIDTLAQEDNAINFY
DIPGCAQWFGKTLDNTRKNNPAIMSIYIGTVRGEIYLYPKQPLPAGYDPRKRPWYQKALASPGKAVWTEPYQDAFTGKTV
VTVARLVEKNGKPVGVVAADILLDHFNDKIKEIKVGKTGYLFAIDQKGTVLAHKDPKLLGKSFANYDFAQKMLSRDSGFF
KYHYNGVDKYLAFITSPRTGWKMAANFEAAEIGADTKTILTASIIIFLITVILLTILALFVARYISNPIQHVVEKLNLIR
SGDLTVAIEGTERNDELGVLAKSLQDTVAGVAALVQKIREVASSVAAAAQEISASTQQIATGSQNQTSEINAIAMEMDAF
AEKAAKAAAYVSEMLKLAEETVFSATQGEKALNENFGGLEEIKAKVSDLEKSAQAISGMLEIINEIAEQTNLLALNAAIE
AARAGEHGRGFAVVAEEVRKLAERSARATEEISAVVKEISAGMQVALKAVNEGERLGRVASESFKEIFGKIEALDERIRE
ISTIAQQQSEGSEKVARSLQNISAITEEISATIEENSAATEELAASAQELVANVEKFKV

Sequences:

>Translated_619_residues
MKLNSLRVKILAILLLMVTIPLLVNTAFNYYEAQKVLYNKLQNTARDAAKLGDVAIDHFLGGIQQTIDTLAQEDNAINFY
DIPGCAQWFGKTLDNTRKNNPAIMSIYIGTVRGEIYLYPKQPLPAGYDPRKRPWYQKALASPGKAVWTEPYQDAFTGKTV
VTVARLVEKNGKPVGVVAADILLDHFNDKIKEIKVGKTGYLFAIDQKGTVLAHKDPKLLGKSFANYDFAQKMLSRDSGFF
KYHYNGVDKYLAFITSPRTGWKMAANFEAAEIGADTKTILTASIIIFLITVILLTILALFVARYISNPIQHVVEKLNLIR
SGDLTVAIEGTERNDELGVLAKSLQDTVAGVAALVQKIREVASSVAAAAQEISASTQQIATGSQNQTSEINAIAMEMDAF
AEKAAKAAAYVSEMLKLAEETVFSATQGEKALNENFGGLEEIKAKVSDLEKSAQAISGMLEIINEIAEQTNLLALNAAIE
AARAGEHGRGFAVVAEEVRKLAERSARATEEISAVVKEISAGMQVALKAVNEGERLGRVASESFKEIFGKIEALDERIRE
ISTIAQQQSEGSEKVARSLQNISAITEEISATIEENSAATEELAASAQELVANVEKFKV
>Mature_619_residues
MKLNSLRVKILAILLLMVTIPLLVNTAFNYYEAQKVLYNKLQNTARDAAKLGDVAIDHFLGGIQQTIDTLAQEDNAINFY
DIPGCAQWFGKTLDNTRKNNPAIMSIYIGTVRGEIYLYPKQPLPAGYDPRKRPWYQKALASPGKAVWTEPYQDAFTGKTV
VTVARLVEKNGKPVGVVAADILLDHFNDKIKEIKVGKTGYLFAIDQKGTVLAHKDPKLLGKSFANYDFAQKMLSRDSGFF
KYHYNGVDKYLAFITSPRTGWKMAANFEAAEIGADTKTILTASIIIFLITVILLTILALFVARYISNPIQHVVEKLNLIR
SGDLTVAIEGTERNDELGVLAKSLQDTVAGVAALVQKIREVASSVAAAAQEISASTQQIATGSQNQTSEINAIAMEMDAF
AEKAAKAAAYVSEMLKLAEETVFSATQGEKALNENFGGLEEIKAKVSDLEKSAQAISGMLEIINEIAEQTNLLALNAAIE
AARAGEHGRGFAVVAEEVRKLAERSARATEEISAVVKEISAGMQVALKAVNEGERLGRVASESFKEIFGKIEALDERIRE
ISTIAQQQSEGSEKVARSLQNISAITEEISATIEENSAATEELAASAQELVANVEKFKV

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=333, Percent_Identity=30.9309309309309, Blast_Score=146, Evalue=4e-36,
Organism=Escherichia coli, GI1788194, Length=384, Percent_Identity=28.6458333333333, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI2367378, Length=307, Percent_Identity=28.9902280130293, Blast_Score=127, Evalue=2e-30,
Organism=Escherichia coli, GI1788195, Length=321, Percent_Identity=29.595015576324, Blast_Score=123, Evalue=4e-29,
Organism=Escherichia coli, GI1789453, Length=327, Percent_Identity=27.5229357798165, Blast_Score=116, Evalue=3e-27,
Organism=Drosophila melanogaster, GI24656142, Length=184, Percent_Identity=28.804347826087, Blast_Score=71, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 67374; Mature: 67374

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLNSLRVKILAILLLMVTIPLLVNTAFNYYEAQKVLYNKLQNTARDAAKLGDVAIDHFL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGIQQTIDTLAQEDNAINFYDIPGCAQWFGKTLDNTRKNNPAIMSIYIGTVRGEIYLYPK
HHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCCCCCCCEEEEEEEEECCEEEEEEC
QPLPAGYDPRKRPWYQKALASPGKAVWTEPYQDAFTGKTVVTVARLVEKNGKPVGVVAAD
CCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCHHHHHH
ILLDHFNDKIKEIKVGKTGYLFAIDQKGTVLAHKDPKLLGKSFANYDFAQKMLSRDSGFF
HHHHHHHHHHHHEECCCCEEEEEECCCCCEEECCCHHHHHHHHCCHHHHHHHHHCCCCEE
KYHYNGVDKYLAFITSPRTGWKMAANFEAAEIGADTKTILTASIIIFLITVILLTILALF
EEECCCHHHHHHHHCCCCCCCEEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VARYISNPIQHVVEKLNLIRSGDLTVAIEGTERNDELGVLAKSLQDTVAGVAALVQKIRE
HHHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VASSVAAAAQEISASTQQIATGSQNQTSEINAIAMEMDAFAEKAAKAAAYVSEMLKLAEE
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVFSATQGEKALNENFGGLEEIKAKVSDLEKSAQAISGMLEIINEIAEQTNLLALNAAIE
HHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEHHHHHHH
AARAGEHGRGFAVVAEEVRKLAERSARATEEISAVVKEISAGMQVALKAVNEGERLGRVA
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
SESFKEIFGKIEALDERIREISTIAQQQSEGSEKVARSLQNISAITEEISATIEENSAAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
EELAASAQELVANVEKFKV
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKLNSLRVKILAILLLMVTIPLLVNTAFNYYEAQKVLYNKLQNTARDAAKLGDVAIDHFL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGIQQTIDTLAQEDNAINFYDIPGCAQWFGKTLDNTRKNNPAIMSIYIGTVRGEIYLYPK
HHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCCCCCCCEEEEEEEEECCEEEEEEC
QPLPAGYDPRKRPWYQKALASPGKAVWTEPYQDAFTGKTVVTVARLVEKNGKPVGVVAAD
CCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCHHHHHH
ILLDHFNDKIKEIKVGKTGYLFAIDQKGTVLAHKDPKLLGKSFANYDFAQKMLSRDSGFF
HHHHHHHHHHHHEECCCCEEEEEECCCCCEEECCCHHHHHHHHCCHHHHHHHHHCCCCEE
KYHYNGVDKYLAFITSPRTGWKMAANFEAAEIGADTKTILTASIIIFLITVILLTILALF
EEECCCHHHHHHHHCCCCCCCEEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VARYISNPIQHVVEKLNLIRSGDLTVAIEGTERNDELGVLAKSLQDTVAGVAALVQKIRE
HHHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VASSVAAAAQEISASTQQIATGSQNQTSEINAIAMEMDAFAEKAAKAAAYVSEMLKLAEE
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVFSATQGEKALNENFGGLEEIKAKVSDLEKSAQAISGMLEIINEIAEQTNLLALNAAIE
HHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEHHHHHHH
AARAGEHGRGFAVVAEEVRKLAERSARATEEISAVVKEISAGMQVALKAVNEGERLGRVA
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
SESFKEIFGKIEALDERIREISTIAQQQSEGSEKVARSLQNISAITEEISATIEENSAAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
EELAASAQELVANVEKFKV
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8188684; 9384377 [H]